RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 CCT2P78371 535 aaKnown RBP11.93□□□□□ -0.5
PHF3-201ENST00000262043 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 CRACR2BQ8N4Y2 399 aaPredicted RBP11.93□□□□□ -0.5
PHF3-201ENST00000262043 TAF4BQ92750 862 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 SLC12A7Q9Y666 1083 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
PHF3-201ENST00000262043 GOLGA6L7A0A1B0GV03 622 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 ANO10Q9NW15 660 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 CCDC196A0A1B0GTZ2 297 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 PTPN14Q15678 1187 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
PHF3-201ENST00000262043 SSRP1Q08945 709 aaKnown RBP11.92□□□□□ -0.5
PHF3-201ENST00000262043 MAP3K12Q12852 859 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 SH2B1Q9NRF2 756 aaPredicted RBP11.92□□□□□ -0.5
PHF3-201ENST00000262043 SFPQP23246 707 aaKnown RBP eCLIP11.92□□□□□ -0.5
PHF3-201ENST00000262043 PTPRCP08575 1304 aa11.92□□□□□ -0.5
PHF3-201ENST00000262043 PLB1Q6P1J6 1458 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 TNIP1Q15025 636 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 SPA17Q15506 151 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 TMOD2Q9NZR1 351 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 SLC5A1P13866 664 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 UBXN4Q92575 508 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 TSG101Q99816 390 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 TRIM27P14373 513 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 CACNA2D4Q7Z3S7 1137 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 UBA5Q9GZZ9 404 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 LRPPRCP42704 1394 aaKnown RBP11.91□□□□□ -0.5
PHF3-201ENST00000262043 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 GOLGA8BA8MQT2 603 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 IQCA1Q86XH1 822 aa11.91□□□□□ -0.5
PHF3-201ENST00000262043 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
PHF3-201ENST00000262043 FKBP15Q5T1M5 1219 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 ZNF444Q8N0Y2 327 aaPredicted RBP11.9□□□□□ -0.5
PHF3-201ENST00000262043 ABCC5O15440 1437 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 EMILIN1Q9Y6C2 1016 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 KIF5CO60282 957 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 NEBLO76041 1014 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 TOP1P11387 765 aaKnown RBP11.9□□□□□ -0.5
PHF3-201ENST00000262043 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
PHF3-201ENST00000262043 CTCFLQ8NI51 663 aaPredicted RBP11.9□□□□□ -0.5
PHF3-201ENST00000262043 POTEJP0CG39 1038 aa11.9□□□□□ -0.51
PHF3-201ENST00000262043 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.51
PHF3-201ENST00000262043 TMX1Q9H3N1 280 aa11.9□□□□□ -0.51
PHF3-201ENST00000262043 TRMT112Q9UI30 125 aaKnown RBP11.9□□□□□ -0.51
PHF3-201ENST00000262043 LIMCH1Q9UPQ0 1083 aa11.9□□□□□ -0.51
PHF3-201ENST00000262043 SSFA2P28290 1259 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 CCDC96Q2M329 555 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 CNNM3Q8NE01 707 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 IFIT3O14879 490 aaKnown RBP11.89□□□□□ -0.51
PHF3-201ENST00000262043 NUP88Q99567 741 aaPredicted RBP11.89□□□□□ -0.51
PHF3-201ENST00000262043 ZSCAN12O43309 604 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
PHF3-201ENST00000262043 CRACR2AQ9BSW2 395 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 CHMP4BP1P59074 171 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 A0A087WZG4 1122 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 CATIPQ7Z7H3 387 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 KIF18AQ8NI77 898 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 EVI5LQ96CN4 794 aa11.89□□□□□ -0.51
PHF3-201ENST00000262043 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
PHF3-201ENST00000262043 TNPO1Q92973 898 aaKnown RBP11.88□□□□□ -0.51
PHF3-201ENST00000262043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.88□□□□□ -0.51
PHF3-201ENST00000262043 GPTP24298 496 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 GJB2P29033 226 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 NLRP5P59047 1200 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 CCDC178Q5BJE1 867 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 GDPD2Q9HCC8 539 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
PHF3-201ENST00000262043 TSHZ3Q63HK5 1081 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 CCDC113Q9H0I3 377 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
PHF3-201ENST00000262043 BIVM-ERCC5R4GMW8 1640 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 SCAF11Q99590 1463 aaKnown RBP11.88□□□□□ -0.51
PHF3-201ENST00000262043 GOLIM4O00461 696 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 ADAMTS2O95450 1211 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 EZRP15311 586 aaKnown RBP11.88□□□□□ -0.51
PHF3-201ENST00000262043 GOPCQ9HD26 462 aa11.88□□□□□ -0.51
PHF3-201ENST00000262043 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 FLIIQ13045 1269 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 TMCO3Q6UWJ1 677 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
PHF3-201ENST00000262043 DNA2P51530 1060 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
PHF3-201ENST00000262043 CTAGE5O15320 804 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 FGFR1OPO95684 399 aaKnown RBP11.87□□□□□ -0.51
PHF3-201ENST00000262043 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 RAB34Q9BZG1 259 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 FOXO3O43524 673 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms