RNA–Protein interactions for RNA: ENST00000261862.7

THSD4-201, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 5 BASIC

Gene THSD4, Length 3,133 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-201ENST00000261862 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
THSD4-201ENST00000261862 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.31
THSD4-201ENST00000261862 CEP83Q9Y592 693 aa17.02■□□□□ 0.31
THSD4-201ENST00000261862 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.31
THSD4-201ENST00000261862 TULP2O00295 520 aa17.01■□□□□ 0.31
THSD4-201ENST00000261862 TNNT1P13805 278 aa17.01■□□□□ 0.31
THSD4-201ENST00000261862 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
THSD4-201ENST00000261862 USP26Q9BXU7 913 aa17.01■□□□□ 0.31
THSD4-201ENST00000261862 SDSP20132 328 aa17.01■□□□□ 0.31
THSD4-201ENST00000261862 SSFA2P28290 1259 aa17.01■□□□□ 0.31
THSD4-201ENST00000261862 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
THSD4-201ENST00000261862 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
THSD4-201ENST00000261862 CEP120Q8N960 986 aa17.01■□□□□ 0.31
THSD4-201ENST00000261862 CRB1P82279 1406 aa17■□□□□ 0.31
THSD4-201ENST00000261862 USP31Q70CQ4 1352 aa17■□□□□ 0.31
THSD4-201ENST00000261862 HMMRO75330 724 aa17■□□□□ 0.31
THSD4-201ENST00000261862 G2E3Q7L622 706 aa17■□□□□ 0.31
THSD4-201ENST00000261862 F6X3S4 739 aa17■□□□□ 0.31
THSD4-201ENST00000261862 SATB1Q01826 763 aa16.99■□□□□ 0.31
THSD4-201ENST00000261862 HMGB1P09429 215 aaKnown RBP16.99■□□□□ 0.31
THSD4-201ENST00000261862 TNNT3P45378 269 aaPredicted RBP16.99■□□□□ 0.31
THSD4-201ENST00000261862 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
THSD4-201ENST00000261862 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.99■□□□□ 0.31
THSD4-201ENST00000261862 AMPHP49418 695 aa16.99■□□□□ 0.31
THSD4-201ENST00000261862 MAP2K1Q02750 393 aaPredicted RBP16.99■□□□□ 0.31
THSD4-201ENST00000261862 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
THSD4-201ENST00000261862 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
THSD4-201ENST00000261862 MYCBPQ99417 103 aaPredicted RBP16.98■□□□□ 0.31
THSD4-201ENST00000261862 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
THSD4-201ENST00000261862 ARHGEF10O15013 1369 aa16.98■□□□□ 0.31
THSD4-201ENST00000261862 SGSM3Q96HU1 749 aa16.97■□□□□ 0.31
THSD4-201ENST00000261862 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
THSD4-201ENST00000261862 CCT4P50991 539 aaKnown RBP16.97■□□□□ 0.31
THSD4-201ENST00000261862 DNAJC21Q5F1R6 531 aaKnown RBP16.97■□□□□ 0.31
THSD4-201ENST00000261862 SASS6Q6UVJ0 657 aa16.97■□□□□ 0.31
THSD4-201ENST00000261862 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
THSD4-201ENST00000261862 EID1Q9Y6B2 187 aa16.97■□□□□ 0.31
THSD4-201ENST00000261862 PEAK1Q9H792 1746 aa16.97■□□□□ 0.31
THSD4-201ENST00000261862 GTF2A1P52655 376 aaPredicted RBP16.96■□□□□ 0.31
THSD4-201ENST00000261862 EFCC1Q9HA90 598 aa16.96■□□□□ 0.31
THSD4-201ENST00000261862 EYA1Q99502 592 aa16.96■□□□□ 0.31
THSD4-201ENST00000261862 FLT4P35916 1363 aa16.96■□□□□ 0.31
THSD4-201ENST00000261862 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
THSD4-201ENST00000261862 UBR1Q8IWV7 1749 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 CCDC66A2RUB6 948 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 REC8O95072 547 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 CCDC172P0C7W6 258 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
THSD4-201ENST00000261862 PTPRUQ92729 1446 aa16.95■□□□□ 0.3
THSD4-201ENST00000261862 GAS2L3Q86XJ1 694 aa16.94■□□□□ 0.3
THSD4-201ENST00000261862 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
THSD4-201ENST00000261862 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
THSD4-201ENST00000261862 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
THSD4-201ENST00000261862 FEZ2Q9UHY8 353 aaPredicted RBP16.94■□□□□ 0.3
THSD4-201ENST00000261862 GNAI2P04899 355 aa16.94■□□□□ 0.3
THSD4-201ENST00000261862 ST18O60284 1047 aa16.93■□□□□ 0.3
THSD4-201ENST00000261862 PDE1AP54750 535 aa16.93■□□□□ 0.3
THSD4-201ENST00000261862 ERC2O15083 957 aa16.93■□□□□ 0.3
THSD4-201ENST00000261862 NUCB2P80303 420 aa16.93■□□□□ 0.3
THSD4-201ENST00000261862 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
THSD4-201ENST00000261862 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
THSD4-201ENST00000261862 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
THSD4-201ENST00000261862 TOPAZ1Q8N9V7 1692 aa16.92■□□□□ 0.3
THSD4-201ENST00000261862 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
THSD4-201ENST00000261862 NECTIN2Q92692 538 aa16.92■□□□□ 0.3
THSD4-201ENST00000261862 NCAPGQ9BPX3 1015 aa16.92■□□□□ 0.3
THSD4-201ENST00000261862 DDX49Q9Y6V7 483 aaKnown RBP16.92■□□□□ 0.3
THSD4-201ENST00000261862 KDRP35968 1356 aa16.92■□□□□ 0.3
THSD4-201ENST00000261862 NLRP6P59044 892 aa16.92■□□□□ 0.3
THSD4-201ENST00000261862 FKBP5Q13451 457 aaPredicted RBP16.92■□□□□ 0.3
THSD4-201ENST00000261862 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
THSD4-201ENST00000261862 CALR3Q96L12 384 aaKnown RBP16.91■□□□□ 0.3
THSD4-201ENST00000261862 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
THSD4-201ENST00000261862 FLIIQ13045 1269 aa16.91■□□□□ 0.3
THSD4-201ENST00000261862 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
THSD4-201ENST00000261862 ZNF513Q8N8E2 541 aaPredicted RBP16.91■□□□□ 0.3
THSD4-201ENST00000261862 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
THSD4-201ENST00000261862 NALCNQ8IZF0 1738 aa16.91■□□□□ 0.3
THSD4-201ENST00000261862 RSPH14Q9UHP6 348 aa16.9■□□□□ 0.3
THSD4-201ENST00000261862 U2AF2P26368 475 aaKnown RBP eCLIP16.9■□□□□ 0.3
THSD4-201ENST00000261862 SETQ01105 290 aaPredicted RBP16.9■□□□□ 0.3
THSD4-201ENST00000261862 TOMM22Q9NS69 142 aa16.9■□□□□ 0.3
THSD4-201ENST00000261862 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
THSD4-201ENST00000261862 TBX22Q9Y458 520 aa16.9■□□□□ 0.3
THSD4-201ENST00000261862 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
THSD4-201ENST00000261862 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
THSD4-201ENST00000261862 GNAI3P08754 354 aa16.89■□□□□ 0.29
THSD4-201ENST00000261862 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
THSD4-201ENST00000261862 ERICH4A6NGS2 130 aa16.89■□□□□ 0.29
THSD4-201ENST00000261862 CCDC173Q0VFZ6 552 aa16.89■□□□□ 0.29
THSD4-201ENST00000261862 KLHL40Q2TBA0 621 aa16.89■□□□□ 0.29
THSD4-201ENST00000261862 TSHZ3Q63HK5 1081 aa16.89■□□□□ 0.29
THSD4-201ENST00000261862 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
THSD4-201ENST00000261862 TSPYL1Q9H0U9 437 aa16.88■□□□□ 0.29
THSD4-201ENST00000261862 ARID4AP29374 1257 aaPredicted RBP16.88■□□□□ 0.29
THSD4-201ENST00000261862 PKP1Q13835 747 aa16.88■□□□□ 0.29
THSD4-201ENST00000261862 CEP170BQ9Y4F5 1589 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms