RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 GOLIM4O00461 696 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 USO1O60763 962 aaKnown RBP8.28□□□□□ -1.08
HERC2-201ENST00000261609 CTAGE8P0CG41 777 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 CTAGE6Q86UF2 777 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 CTAGE4Q8IX94 777 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 SEPT11Q9NVA2 429 aaKnown RBP8.28□□□□□ -1.08
HERC2-201ENST00000261609 PIP4K2BP78356 416 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 CASKIN1Q8WXD9 1431 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 DMTNQ08495 405 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 KLHL10Q6JEL2 608 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 NBPF11Q86T75 865 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 LIMCH1Q9UPQ0 1083 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 KIF4AO95239 1232 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 CCDC57Q2TAC2 916 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 IGHDP01880 384 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 NAA15Q9BXJ9 866 aaKnown RBP8.28□□□□□ -1.08
HERC2-201ENST00000261609 HLTFQ14527 1009 aaKnown RBP eCLIP8.28□□□□□ -1.084e-7■□□□□ 10
HERC2-201ENST00000261609 ALS2CR12Q96Q35 445 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 U3KPZ7 1027 aaPredicted RBP8.28□□□□□ -1.08
HERC2-201ENST00000261609 POLA1P09884 1462 aaPredicted RBP8.28□□□□□ -1.08
HERC2-201ENST00000261609 PTGS1P23219 599 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 PSME1Q06323 249 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 DNAJC21Q5F1R6 531 aaKnown RBP8.28□□□□□ -1.08
HERC2-201ENST00000261609 FERMT3Q86UX7 667 aa8.28□□□□□ -1.08
HERC2-201ENST00000261609 NKTRP30414 1462 aaKnown RBP8.28□□□□□ -1.08
HERC2-201ENST00000261609 NUP88Q99567 741 aaPredicted RBP8.27□□□□□ -1.08
HERC2-201ENST00000261609 DDX19AQ9NUU7 478 aaKnown RBP8.27□□□□□ -1.08
HERC2-201ENST00000261609 MATR3P43243 847 aaKnown RBP eCLIP8.27□□□□□ -1.094e-6■■■□□ 15.2
HERC2-201ENST00000261609 PHAXQ9H814 394 aaKnown RBP8.27□□□□□ -1.09
HERC2-201ENST00000261609 TMEM57Q8N5G2 664 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 CTAGE9A4FU28 777 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 CCDC6Q16204 474 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 SNX21Q969T3 373 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 HFM1A2PYH4 1435 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 SWAP70Q9UH65 585 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 TBC1D9Q6ZT07 1266 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
HERC2-201ENST00000261609 BIN1O00499 593 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 NBPF8Q3BBV2 869 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 MTMR7Q9Y216 660 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 INPP5BP32019 993 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 UBASH3AP57075 661 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 FAM76AQ8TAV0 307 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.26□□□□□ -1.09
HERC2-201ENST00000261609 NCOA2Q15596 1464 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 DNA2P51530 1060 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 EHBP1Q8NDI1 1231 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 ERBINQ96RT1 1412 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 CNKSR2Q8WXI2 1034 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 ZEB2O60315 1214 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 CCDC160A6NGH7 325 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 FGFR1OPO95684 399 aaKnown RBP8.26□□□□□ -1.09
HERC2-201ENST00000261609 ARID4AP29374 1257 aaPredicted RBP8.26□□□□□ -1.09
HERC2-201ENST00000261609 FBF1Q8TES7 1133 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 STX6O43752 255 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 CCDC178Q5BJE1 867 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 RAB11FIP3O75154 756 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 PHACTR2O75167 634 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 RAPGEF4Q8WZA2 1011 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 RIOK3O14730 519 aaKnown RBP8.26□□□□□ -1.09
HERC2-201ENST00000261609 RAB3GAP1Q15042 981 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 ALDH1L2Q3SY69 923 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 PLEKHO1Q53GL0 409 aaPredicted RBP8.26□□□□□ -1.09
HERC2-201ENST00000261609 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.26□□□□□ -1.09
HERC2-201ENST00000261609 AEBP2Q6ZN18 517 aaPredicted RBP8.26□□□□□ -1.09
HERC2-201ENST00000261609 VPS36Q86VN1 386 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 FSIP1Q8NA03 581 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 KIF3CO14782 793 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 UBAC1Q9BSL1 405 aa8.26□□□□□ -1.09
HERC2-201ENST00000261609 ZSCAN25Q6NSZ9 544 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 FMNL3Q8IVF7 1028 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 CADPSQ9ULU8 1353 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 CCDC12Q8WUD4 166 aaPredicted RBP8.25□□□□□ -1.09
HERC2-201ENST00000261609 ATP6V1AP38606 617 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 ZHX3Q9H4I2 956 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 SMARCA5O60264 1052 aaPredicted RBP8.25□□□□□ -1.09
HERC2-201ENST00000261609 RPAP2Q8IXW5 612 aaPredicted RBP8.25□□□□□ -1.09
HERC2-201ENST00000261609 ERO1AQ96HE7 468 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 TUBBP07437 444 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 FKBP15Q5T1M5 1219 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 KIAA1107Q9UPP5 1409 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 DHX29Q7Z478 1369 aaKnown RBP8.25□□□□□ -1.09
HERC2-201ENST00000261609 CKAP4Q07065 602 aaKnown RBP8.25□□□□□ -1.09
HERC2-201ENST00000261609 RPAINQ86UA6 219 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
HERC2-201ENST00000261609 SYT1P21579 422 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 UTP14CQ5TAP6 766 aaKnown RBP8.25□□□□□ -1.09
HERC2-201ENST00000261609 SMARCA4P51532 1647 aa8.25□□□□□ -1.09
HERC2-201ENST00000261609 TMEM132AQ24JP5 1023 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 C17orf53Q8N3J3 647 aaPredicted RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 CFAP57Q96MR6 1250 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 ANKRD30BQ9BXX2 1392 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 FCHSD2O94868 740 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 RARSP54136 660 aaKnown RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 LRPPRCP42704 1394 aaKnown RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 PCK1P35558 622 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 SEPT6Q14141 434 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 BMP2KLQ5H9B9 411 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 MIPOL1Q8TD10 442 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms