RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.45■□□□□ 0.7
SNCAIP-202ENST00000261368 RGS12O14924 1447 aa19.45■□□□□ 0.7
SNCAIP-202ENST00000261368 ANAPC15P60006 121 aa19.45■□□□□ 0.7
SNCAIP-202ENST00000261368 IL17REQ8NFR9 667 aa19.45■□□□□ 0.7
SNCAIP-202ENST00000261368 SIL1Q9H173 461 aa19.45■□□□□ 0.7
SNCAIP-202ENST00000261368 FLT4P35916 1363 aa19.44■□□□□ 0.7
SNCAIP-202ENST00000261368 GIMAP6Q6P9H5 292 aa19.44■□□□□ 0.7
SNCAIP-202ENST00000261368 DRC7Q8IY82 874 aa19.44■□□□□ 0.7
SNCAIP-202ENST00000261368 C17orf53Q8N3J3 647 aaPredicted RBP19.44■□□□□ 0.7
SNCAIP-202ENST00000261368 TCEANC2Q96MN5 208 aa19.44■□□□□ 0.7
SNCAIP-202ENST00000261368 TTC12Q9H892 705 aaPredicted RBP19.44■□□□□ 0.7
SNCAIP-202ENST00000261368 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
SNCAIP-202ENST00000261368 NAP1L2Q9ULW6 460 aaPredicted RBP19.43■□□□□ 0.7
SNCAIP-202ENST00000261368 SOS1Q07889 1333 aaPredicted RBP19.43■□□□□ 0.7
SNCAIP-202ENST00000261368 ATP6V1DQ9Y5K8 247 aa19.43■□□□□ 0.7
SNCAIP-202ENST00000261368 STX6O43752 255 aa19.43■□□□□ 0.7
SNCAIP-202ENST00000261368 NECAB1Q8N987 351 aa19.43■□□□□ 0.7
SNCAIP-202ENST00000261368 GPATCH3Q96I76 525 aa19.43■□□□□ 0.7
SNCAIP-202ENST00000261368 ANKRD26Q9UPS8 1709 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 FGD1P98174 961 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 RUFY2Q8WXA3 655 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 PDCL3Q9H2J4 239 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 MPRIPQ6WCQ1 1025 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 INTS4Q96HW7 963 aaKnown RBP19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 LIMCH1Q9UPQ0 1083 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 TNRQ92752 1358 aa19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 ZKSCAN1P17029 563 aaPredicted RBP19.42■□□□□ 0.7
SNCAIP-202ENST00000261368 PLEKHG3A1L390 1219 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 STK3Q13188 491 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 RASEFQ8IZ41 740 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 BCL11BQ9C0K0 894 aaPredicted RBP19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 PDRG1Q9NUG6 133 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 ADCY5O95622 1261 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 DNAAF4Q8WXU2 420 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 AACSQ86V21 672 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 SNX14Q9Y5W7 946 aa19.41■□□□□ 0.7
SNCAIP-202ENST00000261368 TSPOAP1O95153 1857 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 SYT1P21579 422 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 HS1BP3Q53T59 392 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 CRB1P82279 1406 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 ZSCAN22P10073 491 aaPredicted RBP19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 FOSBP53539 338 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 CUL4AQ13619 759 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 CAMK4Q16566 473 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 CCDC183Q5T5S1 534 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 GJB2P29033 226 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 DNM1Q05193 864 aaKnown RBP19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 ZNF530Q6P9A1 599 aaPredicted RBP19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 PKNOX2Q96KN3 472 aa19.4■□□□□ 0.7
SNCAIP-202ENST00000261368 RAB11FIP3O75154 756 aa19.39■□□□□ 0.7
SNCAIP-202ENST00000261368 LGR6Q9HBX8 967 aa19.39■□□□□ 0.7
SNCAIP-202ENST00000261368 CYP46A1Q9Y6A2 500 aa19.39■□□□□ 0.7
SNCAIP-202ENST00000261368 CDC42BPGQ6DT37 1551 aa19.39■□□□□ 0.7
SNCAIP-202ENST00000261368 KCNQ3O43525 872 aa19.39■□□□□ 0.69
SNCAIP-202ENST00000261368 CCDC8Q9H0W5 538 aaPredicted RBP19.39■□□□□ 0.69
SNCAIP-202ENST00000261368 FAM177BA6PVY3 158 aa19.39■□□□□ 0.69
SNCAIP-202ENST00000261368 HOXC9P31274 260 aa19.39■□□□□ 0.69
SNCAIP-202ENST00000261368 HSPA4P34932 840 aa19.39■□□□□ 0.69
SNCAIP-202ENST00000261368 HSP90AB4PQ58FF6 505 aa19.39■□□□□ 0.69
SNCAIP-202ENST00000261368 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
SNCAIP-202ENST00000261368 TSC1Q92574 1164 aa19.38■□□□□ 0.69
SNCAIP-202ENST00000261368 KNDC1Q76NI1 1749 aa19.38■□□□□ 0.69
SNCAIP-202ENST00000261368 SGSM2O43147 1006 aa19.38■□□□□ 0.69
SNCAIP-202ENST00000261368 USP6P35125 1406 aa19.38■□□□□ 0.69
SNCAIP-202ENST00000261368 PDLIM2Q96JY6 352 aa19.38■□□□□ 0.69
SNCAIP-202ENST00000261368 DLG5Q8TDM6 1919 aa19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 SBNO1A3KN83 1393 aa19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 GLRX3O76003 335 aaKnown RBP19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 G3BP1Q13283 466 aaKnown RBP eCLIP19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 C1orf141Q5JVX7 400 aa19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 LARP1BQ659C4 914 aaKnown RBP19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 FAM173BQ6P4H8 233 aa19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 FSD1Q9BTV5 496 aa19.37■□□□□ 0.69
SNCAIP-202ENST00000261368 HSP90B1P14625 803 aaKnown RBP19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 ARHGEF10O15013 1369 aa19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 BOLA2Q9H3K6 86 aa19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 TTC21AQ8NDW8 1320 aa19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 ZNF500O60304 480 aaPredicted RBP19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 PSME1Q06323 249 aa19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 SASS6Q6UVJ0 657 aa19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 SSH3Q8TE77 659 aa19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 STAP2Q9UGK3 403 aa19.36■□□□□ 0.69
SNCAIP-202ENST00000261368 CWF19L2Q2TBE0 894 aaKnown RBP19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 MAP3K5Q99683 1374 aa19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 RAD50Q92878 1312 aa19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 F13A1P00488 732 aa19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 RUFY3Q7L099 469 aa19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 TFIP11Q9UBB9 837 aaKnown RBP19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 UBE2HP62256 183 aa19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 MAP3K2Q9Y2U5 619 aa19.35■□□□□ 0.69
SNCAIP-202ENST00000261368 TMEM2Q9UHN6 1383 aa19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 CLTCQ00610 1675 aaKnown RBP19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 LARGE1O95461 756 aa19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 CHAF1AQ13111 956 aaPredicted RBP19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 PTH1RQ03431 593 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms