RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 CCDC66A2RUB6 948 aa17.68■□□□□ 0.42
KCTD3-201ENST00000259154 MEIS3Q99687 375 aa17.68■□□□□ 0.42
KCTD3-201ENST00000259154 VAMP4O75379 141 aa17.67■□□□□ 0.42
KCTD3-201ENST00000259154 CCDC186Q7Z3E2 898 aa17.67■□□□□ 0.42
KCTD3-201ENST00000259154 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
KCTD3-201ENST00000259154 NECAB1Q8N987 351 aa17.67■□□□□ 0.42
KCTD3-201ENST00000259154 COL3A1P02461 1466 aaPredicted RBP17.67■□□□□ 0.42
KCTD3-201ENST00000259154 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
KCTD3-201ENST00000259154 TEX35Q5T0J7 233 aa17.67■□□□□ 0.42
KCTD3-201ENST00000259154 SNX21Q969T3 373 aa17.67■□□□□ 0.42
KCTD3-201ENST00000259154 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
KCTD3-201ENST00000259154 RBM33Q96EV2 1170 aaKnown RBP17.67■□□□□ 0.42
KCTD3-201ENST00000259154 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
KCTD3-201ENST00000259154 GADD45BO75293 160 aaPredicted RBP17.66■□□□□ 0.42
KCTD3-201ENST00000259154 GNAI2P04899 355 aa17.66■□□□□ 0.42
KCTD3-201ENST00000259154 FAM173BQ6P4H8 233 aa17.66■□□□□ 0.42
KCTD3-201ENST00000259154 GUCY1B3Q02153 619 aa17.66■□□□□ 0.42
KCTD3-201ENST00000259154 METP08581 1390 aa17.66■□□□□ 0.42
KCTD3-201ENST00000259154 CCDC94Q9BW85 323 aaPredicted RBP17.66■□□□□ 0.42
KCTD3-201ENST00000259154 CCDC183Q5T5S1 534 aa17.66■□□□□ 0.42
KCTD3-201ENST00000259154 GOLGA6L1Q8N7Z2 621 aa17.66■□□□□ 0.42
KCTD3-201ENST00000259154 MCM2P49736 904 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 RUFY2Q8WXA3 655 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 KRT85P78386 507 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 ISM2Q6H9L7 571 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 SPATA32Q96LK8 384 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 CCDC61Q9Y6R9 512 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 PTGS1P23219 599 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 PSME1Q06323 249 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 TTC22Q5TAA0 569 aa17.65■□□□□ 0.42
KCTD3-201ENST00000259154 PRPF40BQ6NWY9 871 aaKnown RBP17.65■□□□□ 0.42
KCTD3-201ENST00000259154 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 FSD1Q9BTV5 496 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 LMBRD1Q9NUN5 540 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 FOXO3O43524 673 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 FCHSD2O94868 740 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 NSD2O96028 1365 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
KCTD3-201ENST00000259154 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
KCTD3-201ENST00000259154 KINO60870 393 aaKnown RBP17.63■□□□□ 0.41
KCTD3-201ENST00000259154 IBSPP21815 317 aaPredicted RBP17.63■□□□□ 0.41
KCTD3-201ENST00000259154 ME1P48163 572 aa17.63■□□□□ 0.41
KCTD3-201ENST00000259154 SRGAP3O43295 1099 aa17.63■□□□□ 0.41
KCTD3-201ENST00000259154 IL13P35225 146 aa17.63■□□□□ 0.41
KCTD3-201ENST00000259154 MRPL50Q8N5N7 158 aaKnown RBP17.63■□□□□ 0.41
KCTD3-201ENST00000259154 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
KCTD3-201ENST00000259154 ZSWIM4Q9H7M6 989 aa17.62■□□□□ 0.41
KCTD3-201ENST00000259154 MX1P20591 662 aa17.62■□□□□ 0.41
KCTD3-201ENST00000259154 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
KCTD3-201ENST00000259154 PTPN14Q15678 1187 aa17.62■□□□□ 0.41
KCTD3-201ENST00000259154 CLIP2Q9UDT6 1046 aa17.62■□□□□ 0.41
KCTD3-201ENST00000259154 CYP46A1Q9Y6A2 500 aa17.62■□□□□ 0.41
KCTD3-201ENST00000259154 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
KCTD3-201ENST00000259154 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 NSFL1CQ9UNZ2 370 aaKnown RBP17.61■□□□□ 0.41
KCTD3-201ENST00000259154 TEFQ10587 303 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 CLASRPQ8N2M8 674 aaKnown RBP17.61■□□□□ 0.41
KCTD3-201ENST00000259154 PDRG1Q9NUG6 133 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 ADGRB2O60241 1585 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 PPIP5K1Q6PFW1 1433 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 WASLO00401 505 aaPredicted RBP17.61■□□□□ 0.41
KCTD3-201ENST00000259154 BIN1O00499 593 aa17.61■□□□□ 0.41
KCTD3-201ENST00000259154 RIOK3O14730 519 aaKnown RBP17.61■□□□□ 0.41
KCTD3-201ENST00000259154 DNAJC2Q99543 621 aaKnown RBP17.61■□□□□ 0.41
KCTD3-201ENST00000259154 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
KCTD3-201ENST00000259154 CT47B1P0C2W7 299 aaPredicted RBP17.6■□□□□ 0.41
KCTD3-201ENST00000259154 HSP90AA4PQ58FG1 418 aa17.6■□□□□ 0.41
KCTD3-201ENST00000259154 LUZP1Q86V48 1076 aa17.6■□□□□ 0.41
KCTD3-201ENST00000259154 PLEKHM2Q8IWE5 1019 aa17.6■□□□□ 0.41
KCTD3-201ENST00000259154 RBM25P49756 843 aaKnown RBP17.6■□□□□ 0.41
KCTD3-201ENST00000259154 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
KCTD3-201ENST00000259154 ARGLU1Q9NWB6 273 aaPredicted RBP17.6■□□□□ 0.41
KCTD3-201ENST00000259154 LETM1O95202 739 aaPredicted RBP17.59■□□□□ 0.41
KCTD3-201ENST00000259154 GPS2Q13227 327 aa17.59■□□□□ 0.41
KCTD3-201ENST00000259154 GPT2Q8TD30 523 aa17.59■□□□□ 0.41
KCTD3-201ENST00000259154 PRR36Q9H6K5 1346 aa17.59■□□□□ 0.41
KCTD3-201ENST00000259154 CPLX1O14810 134 aa17.59■□□□□ 0.41
KCTD3-201ENST00000259154 STX6O43752 255 aa17.59■□□□□ 0.41
KCTD3-201ENST00000259154 G3BP1Q13283 466 aaKnown RBP eCLIP17.58■□□□□ 0.41
KCTD3-201ENST00000259154 RPAP2Q8IXW5 612 aaPredicted RBP17.58■□□□□ 0.41
KCTD3-201ENST00000259154 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.41
KCTD3-201ENST00000259154 GJB2P29033 226 aa17.58■□□□□ 0.4
KCTD3-201ENST00000259154 MAP2P11137 1827 aaKnown RBP17.57■□□□□ 0.4
KCTD3-201ENST00000259154 ZNF165P49910 485 aa17.57■□□□□ 0.4
KCTD3-201ENST00000259154 USP26Q9BXU7 913 aa17.57■□□□□ 0.4
KCTD3-201ENST00000259154 URI1O94763 535 aaPredicted RBP17.57■□□□□ 0.4
KCTD3-201ENST00000259154 ANXA1P04083 346 aa17.57■□□□□ 0.4
KCTD3-201ENST00000259154 GNAI3P08754 354 aa17.57■□□□□ 0.4
KCTD3-201ENST00000259154 MCM5P33992 734 aa17.57■□□□□ 0.4
KCTD3-201ENST00000259154 PRIMPOLQ96LW4 560 aa17.57■□□□□ 0.4
KCTD3-201ENST00000259154 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
KCTD3-201ENST00000259154 PNPLA6Q8IY17 1366 aa17.57■□□□□ 0.4
KCTD3-201ENST00000259154 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
KCTD3-201ENST00000259154 BCL2L12Q9HB09 334 aa17.56■□□□□ 0.4
KCTD3-201ENST00000259154 PUS7Q96PZ0 661 aaKnown RBP17.56■□□□□ 0.4
KCTD3-201ENST00000259154 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
KCTD3-201ENST00000259154 CPS1P31327 1500 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms