RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 PNMA6EA0A0J9YXQ4 647 aa16.72■□□□□ 0.27
LIMD2-201ENST00000259006 MCCP23508 829 aa16.72■□□□□ 0.27
LIMD2-201ENST00000259006 LTKP29376 864 aa16.72■□□□□ 0.27
LIMD2-201ENST00000259006 LMOD3Q0VAK6 560 aa16.72■□□□□ 0.27
LIMD2-201ENST00000259006 HMMRO75330 724 aa16.71■□□□□ 0.27
LIMD2-201ENST00000259006 SLFN14P0C7P3 912 aa16.71■□□□□ 0.27
LIMD2-201ENST00000259006 RBM33Q96EV2 1170 aaKnown RBP16.71■□□□□ 0.27
LIMD2-201ENST00000259006 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
LIMD2-201ENST00000259006 PREX1Q8TCU6 1659 aa16.71■□□□□ 0.27
LIMD2-201ENST00000259006 PIK3R4Q99570 1358 aa16.71■□□□□ 0.27
LIMD2-201ENST00000259006 CD163L1Q9NR16 1453 aa16.71■□□□□ 0.27
LIMD2-201ENST00000259006 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
LIMD2-201ENST00000259006 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.26
LIMD2-201ENST00000259006 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.26
LIMD2-201ENST00000259006 MMP14P50281 582 aa16.7■□□□□ 0.26
LIMD2-201ENST00000259006 FKBP5Q13451 457 aaPredicted RBP16.7■□□□□ 0.26
LIMD2-201ENST00000259006 TMED8Q6PL24 325 aaPredicted RBP16.7■□□□□ 0.26
LIMD2-201ENST00000259006 IFT172Q9UG01 1749 aa16.7■□□□□ 0.26
LIMD2-201ENST00000259006 AGLP35573 1532 aa16.7■□□□□ 0.26
LIMD2-201ENST00000259006 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
LIMD2-201ENST00000259006 HSP90AB2PQ58FF8 381 aa16.69■□□□□ 0.26
LIMD2-201ENST00000259006 SRCIN1Q9C0H9 1055 aa16.69■□□□□ 0.26
LIMD2-201ENST00000259006 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
LIMD2-201ENST00000259006 MX1P20591 662 aa16.69■□□□□ 0.26
LIMD2-201ENST00000259006 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
LIMD2-201ENST00000259006 OGFRQ9NZT2 677 aa16.69■□□□□ 0.26
LIMD2-201ENST00000259006 LRRCC1Q9C099 1032 aa16.68■□□□□ 0.26
LIMD2-201ENST00000259006 CHMLP26374 656 aa16.68■□□□□ 0.26
LIMD2-201ENST00000259006 GABPB1Q06547 395 aaPredicted RBP16.68■□□□□ 0.26
LIMD2-201ENST00000259006 CALCOCO1Q9P1Z2 691 aa16.68■□□□□ 0.26
LIMD2-201ENST00000259006 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
LIMD2-201ENST00000259006 ZC3H13Q5T200 1668 aaKnown RBP16.67■□□□□ 0.26
LIMD2-201ENST00000259006 PPLO60437 1756 aa16.67■□□□□ 0.26
LIMD2-201ENST00000259006 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
LIMD2-201ENST00000259006 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
LIMD2-201ENST00000259006 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
LIMD2-201ENST00000259006 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
LIMD2-201ENST00000259006 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
LIMD2-201ENST00000259006 GTF2F1P35269 517 aaKnown RBP eCLIP16.67■□□□□ 0.26
LIMD2-201ENST00000259006 EIF4A2Q14240 407 aaKnown RBP16.66■□□□□ 0.26
LIMD2-201ENST00000259006 GNAI2P04899 355 aa16.66■□□□□ 0.26
LIMD2-201ENST00000259006 CAMK4Q16566 473 aa16.66■□□□□ 0.26
LIMD2-201ENST00000259006 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
LIMD2-201ENST00000259006 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
LIMD2-201ENST00000259006 FEZ2Q9UHY8 353 aaPredicted RBP16.65■□□□□ 0.26
LIMD2-201ENST00000259006 VPS37CA5D8V6 355 aaPredicted RBP16.65■□□□□ 0.26
LIMD2-201ENST00000259006 TULP2O00295 520 aa16.65■□□□□ 0.26
LIMD2-201ENST00000259006 FAM173BQ6P4H8 233 aa16.65■□□□□ 0.26
LIMD2-201ENST00000259006 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
LIMD2-201ENST00000259006 RSPH14Q9UHP6 348 aa16.65■□□□□ 0.26
LIMD2-201ENST00000259006 USP32Q8NFA0 1604 aa16.65■□□□□ 0.26
LIMD2-201ENST00000259006 METP08581 1390 aa16.64■□□□□ 0.26
LIMD2-201ENST00000259006 TULP1O00294 542 aaPredicted RBP16.64■□□□□ 0.25
LIMD2-201ENST00000259006 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
LIMD2-201ENST00000259006 CWC27Q6UX04 472 aaKnown RBP16.64■□□□□ 0.25
LIMD2-201ENST00000259006 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
LIMD2-201ENST00000259006 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
LIMD2-201ENST00000259006 FEZ1Q99689 392 aa16.64■□□□□ 0.25
LIMD2-201ENST00000259006 GEMIN8Q9NWZ8 242 aaKnown RBP16.64■□□□□ 0.25
LIMD2-201ENST00000259006 CHL1O00533 1208 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 PHF14O94880 888 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 TERF2Q15554 542 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 DNM1Q05193 864 aaKnown RBP16.63■□□□□ 0.25
LIMD2-201ENST00000259006 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 PYCARDQ9ULZ3 195 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
LIMD2-201ENST00000259006 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 TCHHQ07283 1943 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 STK31Q9BXU1 1019 aa16.63■□□□□ 0.25
LIMD2-201ENST00000259006 AP5Z1O43299 807 aa16.62■□□□□ 0.25
LIMD2-201ENST00000259006 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
LIMD2-201ENST00000259006 GTF2A1P52655 376 aaPredicted RBP16.62■□□□□ 0.25
LIMD2-201ENST00000259006 CUL4AQ13619 759 aa16.62■□□□□ 0.25
LIMD2-201ENST00000259006 RASEFQ8IZ41 740 aa16.62■□□□□ 0.25
LIMD2-201ENST00000259006 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
LIMD2-201ENST00000259006 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
LIMD2-201ENST00000259006 AK2P54819 239 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 GPATCH11Q8N954 259 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 BANK1Q8NDB2 785 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
LIMD2-201ENST00000259006 SMC3Q9UQE7 1217 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 LARGE1O95461 756 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 SYT1P21579 422 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 MCM2P49736 904 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 DRC7Q8IY82 874 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
LIMD2-201ENST00000259006 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 PTPRMP28827 1452 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 CCDC183Q5T5S1 534 aa16.61■□□□□ 0.25
LIMD2-201ENST00000259006 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
LIMD2-201ENST00000259006 THEMISQ8N1K5 641 aaPredicted RBP16.6■□□□□ 0.25
LIMD2-201ENST00000259006 RGS12O14924 1447 aa16.6■□□□□ 0.25
LIMD2-201ENST00000259006 CHAF1AQ13111 956 aaPredicted RBP16.6■□□□□ 0.25
LIMD2-201ENST00000259006 CKAP2LQ8IYA6 745 aa16.6■□□□□ 0.25
LIMD2-201ENST00000259006 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
LIMD2-201ENST00000259006 STX6O43752 255 aa16.59■□□□□ 0.25
LIMD2-201ENST00000259006 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms