RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ZSCAN9O15535 394 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-201ENST00000258733 RAB11FIP3O75154 756 aa9.13□□□□□ -0.95
GPNMB-201ENST00000258733 NBPF7P0C2Y1 421 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-201ENST00000258733 BDNFP23560 247 aa9.13□□□□□ -0.95
GPNMB-201ENST00000258733 RBM6P78332 1123 aaKnown RBP9.13□□□□□ -0.95
GPNMB-201ENST00000258733 ICA1Q05084 483 aa9.13□□□□□ -0.95
GPNMB-201ENST00000258733 PDIA5Q14554 519 aa9.13□□□□□ -0.95
GPNMB-201ENST00000258733 TTLL5Q6EMB2 1281 aa9.13□□□□□ -0.95
GPNMB-201ENST00000258733 GIMAP7Q8NHV1 300 aa9.13□□□□□ -0.95
GPNMB-201ENST00000258733 DUSP9Q99956 384 aaKnown RBP9.13□□□□□ -0.95
GPNMB-201ENST00000258733 THRAP3Q9Y2W1 955 aaKnown RBP9.13□□□□□ -0.95
GPNMB-201ENST00000258733 HECW2Q9P2P5 1572 aa9.13□□□□□ -0.95
GPNMB-201ENST00000258733 PYGLP06737 847 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 MCCD1P59942 119 aaPredicted RBP9.12□□□□□ -0.95
GPNMB-201ENST00000258733 ZNF662Q6ZS27 426 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 NEK11Q8NG66 645 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 UHMK1Q8TAS1 419 aaKnown RBP9.12□□□□□ -0.95
GPNMB-201ENST00000258733 MORC4Q8TE76 937 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 PPM1EQ8WY54 764 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 RSPH1Q8WYR4 309 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 MRFAP1L1Q96HT8 127 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 METTL14Q9HCE5 456 aaKnown RBP9.12□□□□□ -0.95
GPNMB-201ENST00000258733 ITM2BQ9Y287 266 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 TPP2P29144 1249 aaPredicted RBP9.12□□□□□ -0.95
GPNMB-201ENST00000258733 PRPF4BQ13523 1007 aaKnown RBP9.12□□□□□ -0.95
GPNMB-201ENST00000258733 CCDC30Q5VVM6 783 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 SAMD3Q8N6K7 520 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 GNL3LQ9NVN8 582 aaKnown RBP9.12□□□□□ -0.95
GPNMB-201ENST00000258733 CHMP5Q9NZZ3 219 aa9.12□□□□□ -0.95
GPNMB-201ENST00000258733 ZNF24P17028 368 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 COPB2P35606 906 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 APLP1P51693 650 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 KCNA1Q09470 495 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 FKBP5Q13451 457 aaPredicted RBP9.11□□□□□ -0.95
GPNMB-201ENST00000258733 SKAP1Q86WV1 359 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 PIBF1Q8WXW3 757 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 UNC45AQ9H3U1 944 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 TMEM165Q9HC07 324 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 VCAM1P19320 739 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 RDXP35241 583 aaKnown RBP9.11□□□□□ -0.95
GPNMB-201ENST00000258733 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
GPNMB-201ENST00000258733 SAPCD2Q86UD0 394 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 ARMC2Q8NEN0 867 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 DNAAF4Q8WXU2 420 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 IRX2Q9BZI1 471 aaPredicted RBP9.11□□□□□ -0.95
GPNMB-201ENST00000258733 RABL2AQ9UBK7 228 aaPredicted RBP9.11□□□□□ -0.95
GPNMB-201ENST00000258733 NRBP1Q9UHY1 535 aa9.11□□□□□ -0.95
GPNMB-201ENST00000258733 G3BP2Q9UN86 482 aaKnown RBP9.11□□□□□ -0.95
GPNMB-201ENST00000258733 ZNF608Q9ULD9 1512 aaPredicted RBP9.11□□□□□ -0.95
GPNMB-201ENST00000258733 SLC27A2O14975 620 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 MYSM1Q5VVJ2 828 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 CFAP43Q8NDM7 1665 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 KCNA2P16389 499 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 GOLGA2Q08379 1002 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 LSM14AQ8ND56 463 aaKnown RBP9.1□□□□□ -0.95
GPNMB-201ENST00000258733 STAG1Q8WVM7 1258 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 KIF1BPQ96EK5 621 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 ST7Q9NRC1 585 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 TRAK1Q9UPV9 953 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 EME2A4GXA9 379 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-201ENST00000258733 TEX35Q5T0J7 233 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 TBC1D5Q92609 795 aa9.1□□□□□ -0.95
GPNMB-201ENST00000258733 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
GPNMB-201ENST00000258733 NPC1L1Q9UHC9 1359 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 STIP1P31948 543 aaKnown RBP9.09□□□□□ -0.95
GPNMB-201ENST00000258733 PRPHP41219 470 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 SFMBT2Q5VUG0 894 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 TRIML1Q8N9V2 468 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 BAG1Q99933 345 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-201ENST00000258733 NACA2Q9H009 215 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 TBC1D7Q9P0N9 293 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 KTN1Q86UP2 1357 aaKnown RBP9.09□□□□□ -0.95
GPNMB-201ENST00000258733 PYGBP11216 843 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 PECAM1P16284 738 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-201ENST00000258733 ELF1P32519 619 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 MNAT1P51948 309 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 SNX1Q13596 522 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 SYNE3Q6ZMZ3 975 aa9.09□□□□□ -0.95
GPNMB-201ENST00000258733 SASH1O94885 1247 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 CHMLP26374 656 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 GJA8P48165 433 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 DBN1Q16643 649 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 ACBD5Q5T8D3 534 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-201ENST00000258733 KLHL10Q6JEL2 608 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 TRIM11Q96F44 468 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 TRIM7Q9C029 511 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
GPNMB-201ENST00000258733 CPP00450 1065 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 MYL1P05976 194 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 GCFC2P16383 781 aaKnown RBP9.08□□□□□ -0.96
GPNMB-201ENST00000258733 SESN3P58005 492 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 NUTM1Q86Y26 1132 aa9.08□□□□□ -0.96
GPNMB-201ENST00000258733 VIRMAQ69YN4 1812 aaKnown RBP9.08□□□□□ -0.96
GPNMB-201ENST00000258733 TPPPO94811 219 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 TMEM110Q86TL2 294 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 FBXO18Q8NFZ0 1043 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms