RNA–Protein interactions for RNA: ENST00000258646.3

RCBTB1-201, Transcript of RCC1 and BTB domain containing protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RCBTB1, Length 3,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1-201ENST00000258646 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 TRIM35Q9UPQ4 493 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 BCORL1Q5H9F3 1711 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 TRIM27P14373 513 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 NCBP3Q53F19 620 aaKnown RBP10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 C20orf194Q5TEA3 1177 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 SMIM5Q71RC9 77 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 G2E3Q7L622 706 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 CNBD1Q8NA66 436 aa10.04□□□□□ -0.8
RCBTB1-201ENST00000258646 ZBTB7AO95365 584 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 MCCP23508 829 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 ZBTB1Q9Y2K1 713 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 ANKRD18BA2A2Z9 1011 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 UTP14AQ9BVJ6 771 aaKnown RBP10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 GNL3LQ9NVN8 582 aaKnown RBP10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 PRAMEF22A3QJZ6 481 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 VAMP4O75379 141 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 CCDC158Q5M9N0 1113 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 KSR2Q6VAB6 950 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 MTMR7Q9Y216 660 aa10.03□□□□□ -0.8
RCBTB1-201ENST00000258646 TULP4Q9NRJ4 1543 aa10.02□□□□□ -0.8
RCBTB1-201ENST00000258646 GPR162Q16538 588 aa10.02□□□□□ -0.8
RCBTB1-201ENST00000258646 TTC39AQ5SRH9 613 aa10.02□□□□□ -0.8
RCBTB1-201ENST00000258646 HELBQ8NG08 1087 aaPredicted RBP10.02□□□□□ -0.8
RCBTB1-201ENST00000258646 MST1RQ04912 1400 aa10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 CHL1O00533 1208 aa10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 AACSQ86V21 672 aa10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 MAP4K4O95819 1239 aaPredicted RBP10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 CRKLP46109 303 aaKnown RBP10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 EIF4A1P60842 406 aaKnown RBP10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 ALDH1L2Q3SY69 923 aa10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 SPRYD3Q8NCJ5 442 aa10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 CDC5LQ99459 802 aaKnown RBP10.02□□□□□ -0.81
RCBTB1-201ENST00000258646 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 USPL1Q5W0Q7 1092 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 TTLL7Q6ZT98 887 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 FSD1Q9BTV5 496 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 NKTRP30414 1462 aaKnown RBP10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 IL16Q14005 1332 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 LRRFIP1Q32MZ4 808 aaKnown RBP10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 MARCH10Q8NA82 808 aaPredicted RBP10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 BCS1LQ9Y276 419 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 ARHGAP23Q9P227 1491 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 ERC2O15083 957 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 GIGYF1O75420 1035 aaPredicted RBP10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 MEIS3Q99687 375 aa10.01□□□□□ -0.81
RCBTB1-201ENST00000258646 IDH1O75874 414 aaKnown RBP10□□□□□ -0.81
RCBTB1-201ENST00000258646 IFIT1P09914 478 aaKnown RBP10□□□□□ -0.81
RCBTB1-201ENST00000258646 R3HDM1Q15032 1099 aaKnown RBP10□□□□□ -0.81
RCBTB1-201ENST00000258646 TXNRD1Q16881 649 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 RAI14Q9P0K7 980 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 LRP2BPQ9P2M1 347 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 TNNQ9UQP3 1299 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 SPATA31A1Q5TZJ5 1347 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 CCDC152Q4G0S7 254 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 CENPQQ7L2Z9 268 aaPredicted RBP10□□□□□ -0.81
RCBTB1-201ENST00000258646 CCDC8Q9H0W5 538 aaPredicted RBP10□□□□□ -0.81
RCBTB1-201ENST00000258646 TMEM131LA2VDJ0 1609 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 ANKRD18AQ8IVF6 992 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 PNPLA6Q8IY17 1366 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 MROH1Q8NDA8 1641 aa10□□□□□ -0.81
RCBTB1-201ENST00000258646 GRM8O00222 908 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 CAVIN4Q5BKX8 364 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 LINS1Q8NG48 757 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 LRRC7Q96NW7 1537 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 ANO2Q9NQ90 1003 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 SNRKQ9NRH2 765 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 SRP68Q9UHB9 627 aaKnown RBP9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 REREQ9P2R6 1566 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 C3P01024 1663 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 VWDEQ8N2E2 1590 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 LRRCC1Q9C099 1032 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 NYXQ9GZU5 481 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 RBM19Q9Y4C8 960 aaKnown RBP9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 SLIT1O75093 1534 aa9.99□□□□□ -0.81
RCBTB1-201ENST00000258646 PALLDQ8WX93 1383 aa9.98□□□□□ -0.81
RCBTB1-201ENST00000258646 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
RCBTB1-201ENST00000258646 SH3TC1Q8TE82 1336 aa9.98□□□□□ -0.81
RCBTB1-201ENST00000258646 ERC1Q8IUD2 1116 aa9.98□□□□□ -0.81
RCBTB1-201ENST00000258646 JAG2Q9Y219 1238 aa9.98□□□□□ -0.81
RCBTB1-201ENST00000258646 CPSF1Q10570 1443 aaKnown RBP9.98□□□□□ -0.81
RCBTB1-201ENST00000258646 RTL1A6NKG5 1358 aa9.98□□□□□ -0.81
RCBTB1-201ENST00000258646 KDM5AP29375 1690 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms