RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 CFAP100Q494V2 611 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 ALS2CR12Q96Q35 445 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 KDM6BO15054 1643 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 NCOA2Q15596 1464 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 ST20-MTHFSA0A0A6YYL1 179 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 FAM177BA6PVY3 158 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 HMGB1P1B2RPK0 211 aaPredicted RBP9.51□□□□□ -0.89
DSG3-201ENST00000257189 RBM5P52756 815 aaKnown RBP eCLIP9.51□□□□□ -0.89
DSG3-201ENST00000257189 FBF1Q8TES7 1133 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 WDR62O43379 1518 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 CCDC7Q96M83 1385 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 PPP1R12BO60237 982 aaPredicted RBP9.51□□□□□ -0.89
DSG3-201ENST00000257189 OPA1O60313 960 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 KIF5BP33176 963 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 FKBP15Q5T1M5 1219 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 A6NNZ2 444 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 NOL3O60936 208 aaKnown RBP9.51□□□□□ -0.89
DSG3-201ENST00000257189 KIF20AO95235 890 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 SARNPP82979 210 aaKnown RBP9.51□□□□□ -0.89
DSG3-201ENST00000257189 TUBB8Q3ZCM7 444 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 IQGAP2Q13576 1575 aa9.51□□□□□ -0.89
DSG3-201ENST00000257189 TROQ12816 1431 aaPredicted RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 TOP1P11387 765 aaKnown RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 HS1BP3Q53T59 392 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 JDP2Q8WYK2 163 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 BIN2Q9UBW5 565 aaPredicted RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 ZFYP08048 801 aaPredicted RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 FOSBP53539 338 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 HOOK3Q86VS8 718 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 TTC14Q96N46 770 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 ZHX1Q9UKY1 873 aaPredicted RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 UHRF1BP1LA0JNW5 1464 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 MAPK8IP2Q13387 824 aaPredicted RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 CCDC6Q16204 474 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 ANKS4BQ8N8V4 417 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 DDX19AQ9NUU7 478 aaKnown RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 ELL2O00472 640 aaPredicted RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 SOCS7O14512 581 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 HSF2BPO75031 334 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 TRIM21P19474 475 aaKnown RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 MSL1Q68DK7 614 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 PHAXQ9H814 394 aaKnown RBP9.5□□□□□ -0.89
DSG3-201ENST00000257189 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
DSG3-201ENST00000257189 A0A1B0GUL7 405 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 YEATS4O95619 227 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 STARD3NLO95772 234 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 CCDC50Q8IVM0 306 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 PAF1Q8N7H5 531 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 RASSF4Q9H2L5 321 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 BICDL1Q6ZP65 573 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 CCDC94Q9BW85 323 aaPredicted RBP9.49□□□□□ -0.89
DSG3-201ENST00000257189 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.89
DSG3-201ENST00000257189 CLIP2Q9UDT6 1046 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 ST5P78524 1137 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 SPECC1Q5M775 1068 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 A0A087WZG4 1122 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
DSG3-201ENST00000257189 GBP6Q6ZN66 633 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 CTNNA3Q9UI47 895 aa9.49□□□□□ -0.89
DSG3-201ENST00000257189 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
DSG3-201ENST00000257189 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 ARFGAP3Q9NP61 516 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 FSD2A1L4K1 749 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 KCNA6P17658 529 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 RBM6P78332 1123 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 DNAJC21Q5F1R6 531 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 ARFGAP2Q8N6H7 521 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 SREK1Q8WXA9 508 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 RPGRQ92834 1020 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 ZNF428Q96B54 188 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 CCDC113Q9H0I3 377 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 USH1CQ9Y6N9 552 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 IFI16Q16666 785 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 CCDC155Q8N6L0 562 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 NAP1L3Q99457 506 aaPredicted RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 PYM1Q9BRP8 204 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 DDX23Q9BUQ8 820 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 DHX29Q7Z478 1369 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 EBAG9O00559 213 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 MYCNP04198 464 aaPredicted RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 FERP16591 822 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 LIG1P18858 919 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 RFX1P22670 979 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 PRAM1Q96QH2 718 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 GOLIM4O00461 696 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 SNW1Q13573 536 aaKnown RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 NACAP1Q9BZK3 213 aa9.48□□□□□ -0.89
DSG3-201ENST00000257189 SH2B1Q9NRF2 756 aaPredicted RBP9.48□□□□□ -0.89
DSG3-201ENST00000257189 RTEL1-TNFRSF6BF6WH68 1400 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 GSTTP1A0A1W2PQM5 241 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 SYCE3A1L190 88 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 BLOC1S2Q6QNY1 142 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 FLAD1Q8NFF5 587 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 CCDC121Q6ZUS5 278 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms