RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CCT2P78371 535 aaKnown RBP19.87■□□□□ 0.77
SORT1-201ENST00000256637 SPTY2D1Q68D10 685 aaPredicted RBP19.87■□□□□ 0.77
SORT1-201ENST00000256637 CCDC141Q6ZP82 1450 aa19.87■□□□□ 0.77
SORT1-201ENST00000256637 BMP2KQ9NSY1 1161 aaPredicted RBP19.87■□□□□ 0.77
SORT1-201ENST00000256637 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
SORT1-201ENST00000256637 ZNF354CQ86Y25 554 aa19.87■□□□□ 0.77
SORT1-201ENST00000256637 CAVIN1Q6NZI2 390 aaKnown RBP19.87■□□□□ 0.77
SORT1-201ENST00000256637 BLOC1S2Q6QNY1 142 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 TSPY2A6NKD2 308 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 CEP57L1Q8IYX8 460 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 CHMP5Q9NZZ3 219 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 TRIM5Q9C035 493 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 STIM1Q13586 685 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 ZBTB21Q9ULJ3 1066 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 ANKRD18AQ8IVF6 992 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 ANKRD30BQ9BXX2 1392 aa19.86■□□□□ 0.77
SORT1-201ENST00000256637 CCDC152Q4G0S7 254 aa19.85■□□□□ 0.77
SORT1-201ENST00000256637 HELBQ8NG08 1087 aaPredicted RBP19.85■□□□□ 0.77
SORT1-201ENST00000256637 PUF60Q9UHX1 559 aaKnown RBP19.85■□□□□ 0.77
SORT1-201ENST00000256637 WDR7Q9Y4E6 1490 aa19.85■□□□□ 0.77
SORT1-201ENST00000256637 DPH6Q7L8W6 267 aa19.85■□□□□ 0.77
SORT1-201ENST00000256637 NSFL1CQ9UNZ2 370 aaKnown RBP19.85■□□□□ 0.77
SORT1-201ENST00000256637 NLRP5P59047 1200 aa19.85■□□□□ 0.77
SORT1-201ENST00000256637 LARP1BQ659C4 914 aaKnown RBP19.85■□□□□ 0.77
SORT1-201ENST00000256637 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
SORT1-201ENST00000256637 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
SORT1-201ENST00000256637 RDXP35241 583 aaKnown RBP19.85■□□□□ 0.77
SORT1-201ENST00000256637 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
SORT1-201ENST00000256637 DZIP3Q86Y13 1208 aaKnown RBP19.84■□□□□ 0.77
SORT1-201ENST00000256637 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
SORT1-201ENST00000256637 HMGB2P26583 209 aaKnown RBP19.84■□□□□ 0.77
SORT1-201ENST00000256637 FAM13BQ9NYF5 915 aa19.84■□□□□ 0.77
SORT1-201ENST00000256637 BICD1Q96G01 975 aa19.84■□□□□ 0.77
SORT1-201ENST00000256637 PRPF40BQ6NWY9 871 aaKnown RBP19.84■□□□□ 0.77
SORT1-201ENST00000256637 FAM212AQ96EL1 285 aa19.84■□□□□ 0.77
SORT1-201ENST00000256637 ZNF213O14771 459 aa19.83■□□□□ 0.77
SORT1-201ENST00000256637 SAP30BPQ9UHR5 308 aaKnown RBP19.83■□□□□ 0.77
SORT1-201ENST00000256637 SKOR2Q2VWA4 1001 aaPredicted RBP19.83■□□□□ 0.77
SORT1-201ENST00000256637 SMARCE1Q969G3 411 aa19.83■□□□□ 0.77
SORT1-201ENST00000256637 IFIT3O14879 490 aaKnown RBP19.83■□□□□ 0.76
SORT1-201ENST00000256637 ABCC5O15440 1437 aa19.83■□□□□ 0.76
SORT1-201ENST00000256637 KLHL10Q6JEL2 608 aa19.83■□□□□ 0.76
SORT1-201ENST00000256637 ATF7IPQ6VMQ6 1270 aa19.83■□□□□ 0.76
SORT1-201ENST00000256637 ZYXQ15942 572 aaKnown RBP19.82■□□□□ 0.76
SORT1-201ENST00000256637 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 MNS1Q8NEH6 495 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 NPHP3Q7Z494 1330 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 FCHSD2O94868 740 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 CTNNA3Q9UI47 895 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 ASXL2Q76L83 1435 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 HYPKQ9NX55 129 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 SLC12A7Q9Y666 1083 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 KIF20AO95235 890 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 NFATC2IPQ8NCF5 419 aa19.82■□□□□ 0.76
SORT1-201ENST00000256637 DNA2P51530 1060 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 CAMK4Q16566 473 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 ARHGAP27Q6ZUM4 889 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 CHPF2Q9P2E5 772 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 HFM1A2PYH4 1435 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 BCS1LQ9Y276 419 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 AKNAD1Q5T1N1 836 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 CCNL1Q9UK58 526 aaPredicted RBP19.81■□□□□ 0.76
SORT1-201ENST00000256637 SEPT7Q16181 437 aaKnown RBP19.81■□□□□ 0.76
SORT1-201ENST00000256637 NLRP3Q96P20 1036 aa19.81■□□□□ 0.76
SORT1-201ENST00000256637 NUCB2P80303 420 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 TSPY3P0CV98 308 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 TSPY8P0CW00 308 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 DNAAF4Q8WXU2 420 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 CENPHQ9H3R5 247 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 FAM182BQ5T319 152 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 GCC1Q96CN9 775 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 KAT14Q9H8E8 782 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 STX8Q9UNK0 236 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 BAG3O95817 575 aa19.8■□□□□ 0.76
SORT1-201ENST00000256637 EFCAB5A4FU69 1503 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 IL2RBP14784 551 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 CCDC83Q8IWF9 413 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 PKD2L1Q9P0L9 805 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 IQCA1Q86XH1 822 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 TMX1Q9H3N1 280 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 DESP17661 470 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 UNC13AQ9UPW8 1703 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 CDKL5O76039 1030 aa19.79■□□□□ 0.76
SORT1-201ENST00000256637 CTCFLQ8NI51 663 aaPredicted RBP19.78■□□□□ 0.76
SORT1-201ENST00000256637 UTP14AQ9BVJ6 771 aaKnown RBP19.78■□□□□ 0.76
SORT1-201ENST00000256637 GPS2Q13227 327 aa19.78■□□□□ 0.76
SORT1-201ENST00000256637 TSHZ2Q9NRE2 1034 aa19.78■□□□□ 0.76
SORT1-201ENST00000256637 ZNHIT6Q9NWK9 470 aaKnown RBP19.78■□□□□ 0.76
SORT1-201ENST00000256637 EHMT1Q9H9B1 1298 aa19.78■□□□□ 0.76
SORT1-201ENST00000256637 FERMT2Q96AC1 680 aa19.78■□□□□ 0.76
SORT1-201ENST00000256637 CYP7A1P22680 504 aa19.78■□□□□ 0.76
SORT1-201ENST00000256637 BRD4O60885 1362 aaPredicted RBP19.77■□□□□ 0.76
SORT1-201ENST00000256637 ZC3H12CQ9C0D7 883 aaKnown RBP19.77■□□□□ 0.76
SORT1-201ENST00000256637 USP8P40818 1118 aa19.77■□□□□ 0.76
SORT1-201ENST00000256637 SETQ01105 290 aaPredicted RBP19.77■□□□□ 0.76
SORT1-201ENST00000256637 SSRP1Q08945 709 aaKnown RBP19.77■□□□□ 0.76
SORT1-201ENST00000256637 KIAA0586Q9BVV6 1533 aa19.77■□□□□ 0.75
SORT1-201ENST00000256637 SNRPA1P09661 255 aaKnown RBP19.76■□□□□ 0.75
SORT1-201ENST00000256637 RFX1P22670 979 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms