RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 RAI14Q9P0K7 980 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 CCDC196A0A1B0GTZ2 297 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 TERF2Q15554 542 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 TTC22Q5TAA0 569 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 ERC1Q8IUD2 1116 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
TRPM1-201ENST00000256552 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
TRPM1-201ENST00000256552 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
TRPM1-201ENST00000256552 MAGEC2Q9UBF1 373 aaPredicted RBP11.88□□□□□ -0.51
TRPM1-201ENST00000256552 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
TRPM1-201ENST00000256552 CAVIN2O95810 425 aa11.87□□□□□ -0.51
TRPM1-201ENST00000256552 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
TRPM1-201ENST00000256552 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
TRPM1-201ENST00000256552 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
TRPM1-201ENST00000256552 CFAP70Q5T0N1 1121 aa11.87□□□□□ -0.51
TRPM1-201ENST00000256552 SLC20A2Q08357 652 aa11.87□□□□□ -0.51
TRPM1-201ENST00000256552 ALDH1L2Q3SY69 923 aa11.87□□□□□ -0.51
TRPM1-201ENST00000256552 GOLGA6L9A6NEM1 432 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 NUTM1Q86Y26 1132 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 ELF2Q15723 593 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 SRRTQ9BXP5 876 aaKnown RBP11.86□□□□□ -0.51
TRPM1-201ENST00000256552 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
TRPM1-201ENST00000256552 TAX1BP1Q86VP1 789 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 SYT10Q6XYQ8 523 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 DNAJC25Q9H1X3 360 aa11.86□□□□□ -0.51
TRPM1-201ENST00000256552 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 CCDC69A6NI79 296 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 TEFQ10587 303 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 CCAR1Q8IX12 1150 aaKnown RBP11.85□□□□□ -0.51
TRPM1-201ENST00000256552 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 EPS15P42566 896 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 TYRO3Q06418 890 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 NEUROD6Q96NK8 337 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 HNRNPH2P55795 449 aaKnown RBP11.85□□□□□ -0.51
TRPM1-201ENST00000256552 NBPF11Q86T75 865 aa11.85□□□□□ -0.51
TRPM1-201ENST00000256552 ERICH2A1L162 156 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 BIN1O00499 593 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 BIRC2Q13490 618 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
TRPM1-201ENST00000256552 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 SYCP1Q15431 976 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 FSIP1Q8NA03 581 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 GOLGA5Q8TBA6 731 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 PHACTR2O75167 634 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 TXLNAP40222 546 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 RBBP5Q15291 538 aaKnown RBP11.84□□□□□ -0.51
TRPM1-201ENST00000256552 LUZP1Q86V48 1076 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 SIL1Q9H173 461 aa11.84□□□□□ -0.51
TRPM1-201ENST00000256552 SPATS2LQ9NUQ6 558 aaKnown RBP11.84□□□□□ -0.51
TRPM1-201ENST00000256552 RLBP1P12271 317 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 CPLX3Q8WVH0 158 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 DACT1Q9NYF0 836 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 RPRD2Q5VT52 1461 aaKnown RBP11.83□□□□□ -0.52
TRPM1-201ENST00000256552 EBAG9O00559 213 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 TUBB4AP04350 444 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 CEP57Q86XR8 500 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
TRPM1-201ENST00000256552 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
TRPM1-201ENST00000256552 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.52
TRPM1-201ENST00000256552 SDSP20132 328 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 DNM1Q05193 864 aaKnown RBP11.83□□□□□ -0.52
TRPM1-201ENST00000256552 NAA25Q14CX7 972 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 MCTP2Q6DN12 878 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 GOLGA1Q92805 767 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 TCEAL9Q9UHQ7 104 aa11.83□□□□□ -0.52
TRPM1-201ENST00000256552 CLNS1AP54105 237 aaKnown RBP11.82□□□□□ -0.52
TRPM1-201ENST00000256552 MAP2K1Q02750 393 aaPredicted RBP11.82□□□□□ -0.52
TRPM1-201ENST00000256552 RSRC1Q96IZ7 334 aaKnown RBP11.82□□□□□ -0.52
TRPM1-201ENST00000256552 F13A1P00488 732 aa11.82□□□□□ -0.52
TRPM1-201ENST00000256552 SEPT6Q14141 434 aa11.82□□□□□ -0.52
TRPM1-201ENST00000256552 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
TRPM1-201ENST00000256552 DAPK1P53355 1430 aa11.82□□□□□ -0.52
TRPM1-201ENST00000256552 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
TRPM1-201ENST00000256552 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
TRPM1-201ENST00000256552 POTEDQ86YR6 584 aa11.82□□□□□ -0.52
TRPM1-201ENST00000256552 SUFUQ9UMX1 484 aa11.82□□□□□ -0.52
TRPM1-201ENST00000256552 KRT32Q14532 448 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 NEK11Q8NG66 645 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
TRPM1-201ENST00000256552 TMEM63CQ9P1W3 806 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 STAMBPO95630 424 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 ATP2C2O75185 946 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 XBP1P17861 261 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 SLC3A2P08195 630 aaKnown RBP11.81□□□□□ -0.52
TRPM1-201ENST00000256552 ZFYVE27Q5T4F4 411 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 NUP133Q8WUM0 1156 aa11.81□□□□□ -0.52
TRPM1-201ENST00000256552 THUMPD2Q9BTF0 503 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms