RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 FERMT3Q86UX7 667 aa13.99□□□□□ -0.17
VRTN-201ENST00000256362 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
VRTN-201ENST00000256362 RGS12O14924 1447 aa13.99□□□□□ -0.17
VRTN-201ENST00000256362 DLG5Q8TDM6 1919 aa13.99□□□□□ -0.17
VRTN-201ENST00000256362 HS1BP3Q53T59 392 aa13.98□□□□□ -0.17
VRTN-201ENST00000256362 SURF6O75683 361 aaKnown RBP13.98□□□□□ -0.17
VRTN-201ENST00000256362 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
VRTN-201ENST00000256362 FOSBP53539 338 aa13.98□□□□□ -0.17
VRTN-201ENST00000256362 NAA30Q147X3 362 aaPredicted RBP13.98□□□□□ -0.17
VRTN-201ENST00000256362 DIAPH3Q9NSV4 1193 aa13.98□□□□□ -0.17
VRTN-201ENST00000256362 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
VRTN-201ENST00000256362 ATP7BP35670 1465 aa13.97□□□□□ -0.17
VRTN-201ENST00000256362 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
VRTN-201ENST00000256362 PTPRCP08575 1304 aa13.97□□□□□ -0.17
VRTN-201ENST00000256362 CPSF1Q10570 1443 aaKnown RBP13.97□□□□□ -0.17
VRTN-201ENST00000256362 CEBPAP49715 358 aaPredicted RBP13.97□□□□□ -0.17
VRTN-201ENST00000256362 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
VRTN-201ENST00000256362 SPG7Q9UQ90 795 aa13.97□□□□□ -0.17
VRTN-201ENST00000256362 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
VRTN-201ENST00000256362 OS9Q13438 667 aaPredicted RBP13.96□□□□□ -0.17
VRTN-201ENST00000256362 CKAP2LQ8IYA6 745 aa13.96□□□□□ -0.17
VRTN-201ENST00000256362 EYA1Q99502 592 aa13.96□□□□□ -0.17
VRTN-201ENST00000256362 CHMLP26374 656 aa13.96□□□□□ -0.17
VRTN-201ENST00000256362 MCM5P33992 734 aa13.96□□□□□ -0.17
VRTN-201ENST00000256362 CCT4P50991 539 aaKnown RBP13.96□□□□□ -0.17
VRTN-201ENST00000256362 TERF1P54274 439 aa13.96□□□□□ -0.18
VRTN-201ENST00000256362 NLRP6P59044 892 aa13.96□□□□□ -0.18
VRTN-201ENST00000256362 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.18
VRTN-201ENST00000256362 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.18
VRTN-201ENST00000256362 TRIM5Q9C035 493 aa13.96□□□□□ -0.18
VRTN-201ENST00000256362 CWC27Q6UX04 472 aaKnown RBP13.95□□□□□ -0.18
VRTN-201ENST00000256362 PDLIM2Q96JY6 352 aa13.95□□□□□ -0.18
VRTN-201ENST00000256362 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
VRTN-201ENST00000256362 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
VRTN-201ENST00000256362 PYCARDQ9ULZ3 195 aa13.95□□□□□ -0.18
VRTN-201ENST00000256362 A2ML1A8K2U0 1454 aa13.95□□□□□ -0.18
VRTN-201ENST00000256362 ROBO2Q9HCK4 1378 aa13.95□□□□□ -0.18
VRTN-201ENST00000256362 TSPOAP1O95153 1857 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 GOLGA6L6A8MZA4 724 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 PTGS1P23219 599 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 DIP2BQ9P265 1576 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 NAP1L2Q9ULW6 460 aaPredicted RBP13.94□□□□□ -0.18
VRTN-201ENST00000256362 GORABQ5T7V8 394 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 CLEC17AQ6ZS10 378 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 PIBF1Q8WXW3 757 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 SMC3Q9UQE7 1217 aa13.94□□□□□ -0.18
VRTN-201ENST00000256362 AATKQ6ZMQ8 1374 aa13.93□□□□□ -0.18
VRTN-201ENST00000256362 PRIMPOLQ96LW4 560 aa13.93□□□□□ -0.18
VRTN-201ENST00000256362 TRMT1Q9NXH9 659 aaKnown RBP13.93□□□□□ -0.18
VRTN-201ENST00000256362 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
VRTN-201ENST00000256362 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
VRTN-201ENST00000256362 CEBPZQ03701 1054 aaKnown RBP13.92□□□□□ -0.18
VRTN-201ENST00000256362 RIMBP3CA6NJZ7 1639 aa13.92□□□□□ -0.18
VRTN-201ENST00000256362 RIMBP3BA6NNM3 1639 aa13.92□□□□□ -0.18
VRTN-201ENST00000256362 RIMBP3Q9UFD9 1639 aa13.92□□□□□ -0.18
VRTN-201ENST00000256362 TNNT3P45378 269 aaPredicted RBP13.92□□□□□ -0.18
VRTN-201ENST00000256362 LRMPQ12912 555 aa13.92□□□□□ -0.18
VRTN-201ENST00000256362 PPP1R42Q7Z4L9 355 aa13.92□□□□□ -0.18
VRTN-201ENST00000256362 SYTL4Q96C24 671 aaPredicted RBP13.92□□□□□ -0.18
VRTN-201ENST00000256362 CCDC30Q5VVM6 783 aa13.92□□□□□ -0.18
VRTN-201ENST00000256362 FAM173BQ6P4H8 233 aa13.92□□□□□ -0.18
VRTN-201ENST00000256362 GNAI3P08754 354 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 CDC42BPGQ6DT37 1551 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
VRTN-201ENST00000256362 BRD1O95696 1058 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 CCDC186Q7Z3E2 898 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 NBPF7P0C2Y1 421 aaPredicted RBP13.91□□□□□ -0.18
VRTN-201ENST00000256362 TNNT1P13805 278 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 FILIP1Q7Z7B0 1213 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 CCDC112Q8NEF3 446 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 TCEANC2Q96MN5 208 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 USP44Q9H0E7 712 aa13.91□□□□□ -0.18
VRTN-201ENST00000256362 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
VRTN-201ENST00000256362 ATP8B2P98198 1209 aa13.9□□□□□ -0.18
VRTN-201ENST00000256362 LTKP29376 864 aa13.9□□□□□ -0.18
VRTN-201ENST00000256362 CCDC183Q5T5S1 534 aa13.9□□□□□ -0.18
VRTN-201ENST00000256362 CCDC83Q8IWF9 413 aa13.9□□□□□ -0.18
VRTN-201ENST00000256362 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
VRTN-201ENST00000256362 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
VRTN-201ENST00000256362 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
VRTN-201ENST00000256362 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
VRTN-201ENST00000256362 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
VRTN-201ENST00000256362 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
VRTN-201ENST00000256362 CRB1P82279 1406 aa13.89□□□□□ -0.19
VRTN-201ENST00000256362 LUZP1Q86V48 1076 aa13.89□□□□□ -0.19
VRTN-201ENST00000256362 IL17REQ8NFR9 667 aa13.89□□□□□ -0.19
VRTN-201ENST00000256362 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
VRTN-201ENST00000256362 GNAT3A8MTJ3 354 aa13.89□□□□□ -0.19
VRTN-201ENST00000256362 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
VRTN-201ENST00000256362 TFIP11Q9UBB9 837 aaKnown RBP13.89□□□□□ -0.19
VRTN-201ENST00000256362 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
VRTN-201ENST00000256362 KIAA0232Q92628 1395 aa13.88□□□□□ -0.19
VRTN-201ENST00000256362 KCNQ3O43525 872 aa13.88□□□□□ -0.19
VRTN-201ENST00000256362 CASTP20810 708 aaKnown RBP13.88□□□□□ -0.19
VRTN-201ENST00000256362 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
VRTN-201ENST00000256362 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
VRTN-201ENST00000256362 KIF24Q5T7B8 1368 aa13.88□□□□□ -0.19
VRTN-201ENST00000256362 DNM1Q05193 864 aaKnown RBP13.88□□□□□ -0.19
VRTN-201ENST00000256362 PA2G4Q9UQ80 394 aaKnown RBP13.88□□□□□ -0.19
VRTN-201ENST00000256362 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms