RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
RPA1-201ENST00000254719 GNAT3A8MTJ3 354 aa11.37□□□□□ -0.59
RPA1-201ENST00000254719 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
RPA1-201ENST00000254719 STAP2Q9UGK3 403 aa11.37□□□□□ -0.59
RPA1-201ENST00000254719 SLIT2O94813 1529 aa11.37□□□□□ -0.59
RPA1-201ENST00000254719 ANXA1P04083 346 aa11.37□□□□□ -0.59
RPA1-201ENST00000254719 ZGPATQ8N5A5 531 aaKnown RBP11.37□□□□□ -0.59
RPA1-201ENST00000254719 SSH3Q8TE77 659 aa11.37□□□□□ -0.59
RPA1-201ENST00000254719 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
RPA1-201ENST00000254719 ST3GAL1Q11201 340 aa11.36□□□□□ -0.59
RPA1-201ENST00000254719 NECTIN2Q92692 538 aa11.36□□□□□ -0.59
RPA1-201ENST00000254719 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
RPA1-201ENST00000254719 MYH15Q9Y2K3 1946 aa11.36□□□□□ -0.59
RPA1-201ENST00000254719 RPAP2Q8IXW5 612 aaPredicted RBP11.36□□□□□ -0.59
RPA1-201ENST00000254719 ABTB2Q8N961 1025 aa11.36□□□□□ -0.59
RPA1-201ENST00000254719 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
RPA1-201ENST00000254719 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
RPA1-201ENST00000254719 ITGB4P16144 1822 aa11.36□□□□□ -0.59
RPA1-201ENST00000254719 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
RPA1-201ENST00000254719 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
RPA1-201ENST00000254719 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
RPA1-201ENST00000254719 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
RPA1-201ENST00000254719 SSFA2P28290 1259 aa11.34□□□□□ -0.59
RPA1-201ENST00000254719 EID1Q9Y6B2 187 aa11.34□□□□□ -0.59
RPA1-201ENST00000254719 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
RPA1-201ENST00000254719 GCP02774 474 aa11.34□□□□□ -0.59
RPA1-201ENST00000254719 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
RPA1-201ENST00000254719 CHPF2Q9P2E5 772 aa11.34□□□□□ -0.59
RPA1-201ENST00000254719 UTYO14607 1347 aa11.34□□□□□ -0.59
RPA1-201ENST00000254719 LRRFIP2Q9Y608 721 aaKnown RBP11.34□□□□□ -0.59
RPA1-201ENST00000254719 TAF6LQ9Y6J9 622 aa11.34□□□□□ -0.59
RPA1-201ENST00000254719 CHGBP05060 677 aa11.33□□□□□ -0.6
RPA1-201ENST00000254719 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
RPA1-201ENST00000254719 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
RPA1-201ENST00000254719 USP42Q9H9J4 1324 aaKnown RBP11.33□□□□□ -0.6
RPA1-201ENST00000254719 IGKV5-2P06315 115 aa11.33□□□□□ -0.6
RPA1-201ENST00000254719 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
RPA1-201ENST00000254719 HDAC5Q9UQL6 1122 aa11.32□□□□□ -0.6
RPA1-201ENST00000254719 PCNTO95613 3336 aa11.32□□□□□ -0.6
RPA1-201ENST00000254719 ERBB3P21860 1342 aa11.32□□□□□ -0.6
RPA1-201ENST00000254719 MCCP23508 829 aa11.32□□□□□ -0.6
RPA1-201ENST00000254719 GLIPR1L2Q4G1C9 344 aa11.32□□□□□ -0.6
RPA1-201ENST00000254719 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
RPA1-201ENST00000254719 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
RPA1-201ENST00000254719 AKAP11Q9UKA4 1901 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 JCADQ9P266 1359 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 DTNBO60941 627 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 HMMRO75330 724 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 CHMLP26374 656 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 EPHA10Q5JZY3 1008 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 MPRIPQ6WCQ1 1025 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 GPT2Q8TD30 523 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 MTX1Q13505 466 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 GBP4Q96PP9 640 aa11.31□□□□□ -0.6
RPA1-201ENST00000254719 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
RPA1-201ENST00000254719 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
RPA1-201ENST00000254719 CDC45O75419 566 aa11.3□□□□□ -0.6
RPA1-201ENST00000254719 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
RPA1-201ENST00000254719 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
RPA1-201ENST00000254719 COL16A1Q07092 1604 aaPredicted RBP11.3□□□□□ -0.6
RPA1-201ENST00000254719 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
RPA1-201ENST00000254719 TMEM94Q12767 1356 aa11.3□□□□□ -0.6
RPA1-201ENST00000254719 AMPHP49418 695 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 CASP7P55210 303 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 TTC14Q96N46 770 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 LMBRD1Q9NUN5 540 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 A0A1B0GUL6 1792 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 SASH1O94885 1247 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 ECM29Q5VYK3 1845 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 CHMP5Q9NZZ3 219 aa11.29□□□□□ -0.6
RPA1-201ENST00000254719 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
RPA1-201ENST00000254719 CUL4AQ13619 759 aa11.28□□□□□ -0.6
RPA1-201ENST00000254719 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
RPA1-201ENST00000254719 CYP27B1O15528 508 aa11.28□□□□□ -0.6
RPA1-201ENST00000254719 TRAK2O60296 914 aa11.28□□□□□ -0.6
RPA1-201ENST00000254719 PI4KAP2A4QPH2 592 aa11.28□□□□□ -0.6
RPA1-201ENST00000254719 CCT4P50991 539 aaKnown RBP11.28□□□□□ -0.6
RPA1-201ENST00000254719 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
RPA1-201ENST00000254719 PI4KAP1Q8N8J0 262 aa11.28□□□□□ -0.6
RPA1-201ENST00000254719 TLR7Q9NYK1 1049 aaKnown RBP11.28□□□□□ -0.6
RPA1-201ENST00000254719 APBB1O00213 710 aa11.27□□□□□ -0.6
RPA1-201ENST00000254719 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.6
RPA1-201ENST00000254719 LSG1Q9H089 658 aaKnown RBP11.27□□□□□ -0.6
RPA1-201ENST00000254719 RFX5P48382 616 aaPredicted RBP11.27□□□□□ -0.61
RPA1-201ENST00000254719 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.61
RPA1-201ENST00000254719 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
RPA1-201ENST00000254719 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.61
RPA1-201ENST00000254719 AKAP4Q5JQC9 854 aa11.27□□□□□ -0.61
RPA1-201ENST00000254719 LARGE1O95461 756 aa11.26□□□□□ -0.61
RPA1-201ENST00000254719 KCNB2Q92953 911 aa11.26□□□□□ -0.61
RPA1-201ENST00000254719 STK31Q9BXU1 1019 aa11.26□□□□□ -0.61
RPA1-201ENST00000254719 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
RPA1-201ENST00000254719 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
RPA1-201ENST00000254719 RBM10P98175 930 aaKnown RBP11.26□□□□□ -0.61
RPA1-201ENST00000254719 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
RPA1-201ENST00000254719 BAG4O95429 457 aaKnown RBP11.26□□□□□ -0.61
RPA1-201ENST00000254719 GNAI2P04899 355 aa11.26□□□□□ -0.61
RPA1-201ENST00000254719 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
RPA1-201ENST00000254719 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms