RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 DDX58O95786 925 aaKnown RBP14.47□□□□□ -0.09
LIN28A-201ENST00000254231 TAF7LQ5H9L4 462 aa14.47□□□□□ -0.09
LIN28A-201ENST00000254231 NEUROD6Q96NK8 337 aa14.47□□□□□ -0.09
LIN28A-201ENST00000254231 PCDH11XQ9BZA7 1347 aa14.47□□□□□ -0.09
LIN28A-201ENST00000254231 PCDH11YQ9BZA8 1340 aa14.47□□□□□ -0.09
LIN28A-201ENST00000254231 QTRT2Q9H974 415 aaKnown RBP14.47□□□□□ -0.09
LIN28A-201ENST00000254231 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.47□□□□□ -0.09
LIN28A-201ENST00000254231 SIRT2Q8IXJ6 389 aa14.46□□□□□ -0.09
LIN28A-201ENST00000254231 PEAK1Q9H792 1746 aa14.46□□□□□ -0.09
LIN28A-201ENST00000254231 SHPRHQ149N8 1683 aa14.46□□□□□ -0.09
LIN28A-201ENST00000254231 HSP90AB1P08238 724 aaKnown RBP14.46□□□□□ -0.1
LIN28A-201ENST00000254231 TRIM37O94972 964 aa14.45□□□□□ -0.1
LIN28A-201ENST00000254231 STK11IPQ8N1F8 1099 aa14.45□□□□□ -0.1
LIN28A-201ENST00000254231 CT47B1P0C2W7 299 aaPredicted RBP14.45□□□□□ -0.1
LIN28A-201ENST00000254231 CCDC8Q9H0W5 538 aaPredicted RBP14.45□□□□□ -0.1
LIN28A-201ENST00000254231 IQSEC2Q5JU85 1478 aa14.45□□□□□ -0.1
LIN28A-201ENST00000254231 KDRP35968 1356 aa14.45□□□□□ -0.1
LIN28A-201ENST00000254231 SLKQ9H2G2 1235 aaPredicted RBP14.45□□□□□ -0.1
LIN28A-201ENST00000254231 STRCP1A6NGW2 1772 aa14.44□□□□□ -0.1
LIN28A-201ENST00000254231 CHD1LQ86WJ1 897 aa14.44□□□□□ -0.1
LIN28A-201ENST00000254231 USP44Q9H0E7 712 aa14.44□□□□□ -0.1
LIN28A-201ENST00000254231 CRB1P82279 1406 aa14.44□□□□□ -0.1
LIN28A-201ENST00000254231 MARCH10Q8NA82 808 aaPredicted RBP14.44□□□□□ -0.1
LIN28A-201ENST00000254231 ZNF594Q96JF6 807 aaPredicted RBP14.44□□□□□ -0.1
LIN28A-201ENST00000254231 ZBTB1Q9Y2K1 713 aa14.44□□□□□ -0.1
LIN28A-201ENST00000254231 AFF2P51816 1311 aa14.44□□□□□ -0.1
LIN28A-201ENST00000254231 HELBQ8NG08 1087 aaPredicted RBP14.43□□□□□ -0.1
LIN28A-201ENST00000254231 CCT4P50991 539 aaKnown RBP14.43□□□□□ -0.1
LIN28A-201ENST00000254231 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
LIN28A-201ENST00000254231 IQSEC3Q9UPP2 1182 aaPredicted RBP14.43□□□□□ -0.1
LIN28A-201ENST00000254231 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
LIN28A-201ENST00000254231 HMMRO75330 724 aa14.42□□□□□ -0.1
LIN28A-201ENST00000254231 JAG2Q9Y219 1238 aa14.42□□□□□ -0.1
LIN28A-201ENST00000254231 FMN2Q9NZ56 1722 aa14.42□□□□□ -0.1
LIN28A-201ENST00000254231 PCNTO95613 3336 aa14.42□□□□□ -0.1
LIN28A-201ENST00000254231 CAMTA1Q9Y6Y1 1673 aa14.42□□□□□ -0.1
LIN28A-201ENST00000254231 CEP85Q6P2H3 762 aa14.42□□□□□ -0.1
LIN28A-201ENST00000254231 SNAP23O00161 211 aa14.41□□□□□ -0.1
LIN28A-201ENST00000254231 STARD3NLO95772 234 aa14.41□□□□□ -0.1
LIN28A-201ENST00000254231 GNAI3P08754 354 aa14.41□□□□□ -0.1
LIN28A-201ENST00000254231 DDX21Q9NR30 783 aaKnown RBP eCLIP14.41□□□□□ -0.1
LIN28A-201ENST00000254231 NBPF26B4DH59 902 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 HCLS1P14317 486 aaPredicted RBP14.4□□□□□ -0.1
LIN28A-201ENST00000254231 NBPF14Q5TI25 921 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 MSL1Q68DK7 614 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 NBPF10Q6P3W6 841 aaKnown RBP14.4□□□□□ -0.1
LIN28A-201ENST00000254231 KSR2Q6VAB6 950 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 UNC5CLQ8IV45 518 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 NBPF15Q8N660 670 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 ATG3Q9NT62 314 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 HSP90AA1P07900 732 aaKnown RBP14.4□□□□□ -0.1
LIN28A-201ENST00000254231 BICC1Q9H694 974 aaKnown RBP14.4□□□□□ -0.1
LIN28A-201ENST00000254231 FOXD4L6Q3SYB3 417 aaPredicted RBP14.4□□□□□ -0.1
LIN28A-201ENST00000254231 FOXD4L3Q6VB84 417 aaPredicted RBP14.4□□□□□ -0.1
LIN28A-201ENST00000254231 LARP6Q9BRS8 491 aaKnown RBP14.4□□□□□ -0.1
LIN28A-201ENST00000254231 HYPKQ9NX55 129 aa14.4□□□□□ -0.1
LIN28A-201ENST00000254231 RTL1A6NKG5 1358 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 FOXD4L5Q5VV16 416 aaPredicted RBP14.39□□□□□ -0.11
LIN28A-201ENST00000254231 LMBR1LQ6UX01 489 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 KIF6Q6ZMV9 814 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 FOXD4L4Q8WXT5 416 aaPredicted RBP14.39□□□□□ -0.11
LIN28A-201ENST00000254231 GORABQ5T7V8 394 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 TRMT112Q9UI30 125 aaKnown RBP14.39□□□□□ -0.11
LIN28A-201ENST00000254231 STRCQ7RTU9 1775 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 KNDC1Q76NI1 1749 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 HLFQ16534 295 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 SEPT12Q8IYM1 358 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 SUCLG2Q96I99 432 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 SNRKQ9NRH2 765 aa14.39□□□□□ -0.11
LIN28A-201ENST00000254231 MON2Q7Z3U7 1717 aa14.38□□□□□ -0.11
LIN28A-201ENST00000254231 G3BP1Q13283 466 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIN28A-201ENST00000254231 BACH2Q9BYV9 841 aa14.38□□□□□ -0.11
LIN28A-201ENST00000254231 MED1Q15648 1581 aaPredicted RBP14.38□□□□□ -0.11
LIN28A-201ENST00000254231 PTPRCP08575 1304 aa14.37□□□□□ -0.11
LIN28A-201ENST00000254231 KDM2BQ8NHM5 1336 aa14.37□□□□□ -0.11
LIN28A-201ENST00000254231 DNAJC2Q99543 621 aaKnown RBP14.37□□□□□ -0.11
LIN28A-201ENST00000254231 CHMP4BQ9H444 224 aaKnown RBP14.37□□□□□ -0.11
LIN28A-201ENST00000254231 NAP1L2Q9ULW6 460 aaPredicted RBP14.37□□□□□ -0.11
LIN28A-201ENST00000254231 EPHA10Q5JZY3 1008 aa14.37□□□□□ -0.11
LIN28A-201ENST00000254231 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
LIN28A-201ENST00000254231 GRM8O00222 908 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 PPFIA3O75145 1194 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 KDM4AO75164 1064 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 AACSQ86V21 672 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 DZIP3Q86Y13 1208 aaKnown RBP14.36□□□□□ -0.11
LIN28A-201ENST00000254231 RGPD2P0DJD1 1756 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 GNPATO15228 680 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 IFIT2P09913 472 aaKnown RBP14.36□□□□□ -0.11
LIN28A-201ENST00000254231 SLC4A8Q2Y0W8 1093 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 EDC3Q96F86 508 aaKnown RBP14.36□□□□□ -0.11
LIN28A-201ENST00000254231 BOLA2Q9H3K6 86 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
LIN28A-201ENST00000254231 INTS3Q68E01 1043 aaKnown RBP14.36□□□□□ -0.11
LIN28A-201ENST00000254231 LOC102724428A0A0B4J2F2 783 aa14.35□□□□□ -0.11
LIN28A-201ENST00000254231 SIK1P57059 783 aa14.35□□□□□ -0.11
LIN28A-201ENST00000254231 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
LIN28A-201ENST00000254231 ARHGAP45Q92619 1136 aa14.35□□□□□ -0.11
LIN28A-201ENST00000254231 ZNF142P52746 1687 aaPredicted RBP14.35□□□□□ -0.11
LIN28A-201ENST00000254231 ABCC4O15439 1325 aa14.35□□□□□ -0.11
LIN28A-201ENST00000254231 AKAP12Q02952 1782 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms