RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 ABCA8O94911 1581 aa22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 CCDC112Q8NEF3 446 aa22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 CCDC8Q9H0W5 538 aaPredicted RBP22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 TNRQ92752 1358 aa22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 CLSTN1O94985 981 aa22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 TOM1L2Q6ZVM7 507 aa22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 DDX11Q96FC9 970 aa22.67■■□□□ 1.22
PPFIA1-201ENST00000253925 PANK2Q9BZ23 570 aa22.67■■□□□ 1.22
PPFIA1-201ENST00000253925 GDPD2Q9HCC8 539 aa22.67■■□□□ 1.22
PPFIA1-201ENST00000253925 U3KPZ7 1027 aaPredicted RBP22.67■■□□□ 1.22
PPFIA1-201ENST00000253925 PRDM10Q9NQV6 1147 aa22.67■■□□□ 1.22
PPFIA1-201ENST00000253925 CDKL5O76039 1030 aa22.66■■□□□ 1.22
PPFIA1-201ENST00000253925 ATP2B1P20020 1258 aa22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 MYD88Q99836 296 aa22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 LRSAM1Q6UWE0 723 aa22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 TRIM22Q8IYM9 498 aa22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 DDX54Q8TDD1 881 aaKnown RBP22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 PDCL3Q9H2J4 239 aa22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 RBM27Q9P2N5 1060 aaKnown RBP22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 KDM4AO75164 1064 aa22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 HMGB1P09429 215 aaKnown RBP22.65■■□□□ 1.22
PPFIA1-201ENST00000253925 KDM5AP29375 1690 aaKnown RBP22.64■■□□□ 1.22
PPFIA1-201ENST00000253925 ZNF521Q96K83 1311 aa22.64■■□□□ 1.22
PPFIA1-201ENST00000253925 USP25Q9UHP3 1055 aa22.64■■□□□ 1.22
PPFIA1-201ENST00000253925 MAP3K2Q9Y2U5 619 aa22.64■■□□□ 1.22
PPFIA1-201ENST00000253925 NACAP1Q9BZK3 213 aa22.64■■□□□ 1.21
PPFIA1-201ENST00000253925 ZMYM3Q14202 1370 aa22.64■■□□□ 1.21
PPFIA1-201ENST00000253925 UBE2HP62256 183 aa22.64■■□□□ 1.21
PPFIA1-201ENST00000253925 CAMK4Q16566 473 aa22.64■■□□□ 1.21
PPFIA1-201ENST00000253925 RRP12Q5JTH9 1297 aaKnown RBP22.64■■□□□ 1.21
PPFIA1-201ENST00000253925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.64■■□□□ 1.211e-8■■■■□ 24.3
PPFIA1-201ENST00000253925 SERPINC1P01008 464 aa22.63■■□□□ 1.21
PPFIA1-201ENST00000253925 GJB2P29033 226 aa22.63■■□□□ 1.21
PPFIA1-201ENST00000253925 IMMTQ16891 758 aaKnown RBP22.63■■□□□ 1.21
PPFIA1-201ENST00000253925 UVSSAQ2YD98 709 aa22.63■■□□□ 1.21
PPFIA1-201ENST00000253925 PRDM11Q9NQV5 511 aa22.63■■□□□ 1.21
PPFIA1-201ENST00000253925 STRN4Q9NRL3 753 aa22.63■■□□□ 1.21
PPFIA1-201ENST00000253925 ATP10AO60312 1499 aa22.62■■□□□ 1.21
PPFIA1-201ENST00000253925 NOM1Q5C9Z4 860 aaKnown RBP22.62■■□□□ 1.21
PPFIA1-201ENST00000253925 FLT4P35916 1363 aa22.62■■□□□ 1.21
PPFIA1-201ENST00000253925 CEBPAP49715 358 aaPredicted RBP22.62■■□□□ 1.21
PPFIA1-201ENST00000253925 MTHFSDQ2M296 383 aaKnown RBP22.62■■□□□ 1.21
PPFIA1-201ENST00000253925 FILIP1LQ4L180 1135 aa22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 DDX19AQ9NUU7 478 aaKnown RBP22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 USP26Q9BXU7 913 aa22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 SAMD9LQ8IVG5 1584 aa22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 KRT24Q2M2I5 525 aa22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 FILIP1Q7Z7B0 1213 aa22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 LARP6Q9BRS8 491 aaKnown RBP22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 VPS53Q5VIR6 699 aa22.61■■□□□ 1.21
PPFIA1-201ENST00000253925 IL13P35225 146 aa22.6■■□□□ 1.21
PPFIA1-201ENST00000253925 FOXO3O43524 673 aa22.6■■□□□ 1.21
PPFIA1-201ENST00000253925 ZSCAN22P10073 491 aaPredicted RBP22.6■■□□□ 1.21
PPFIA1-201ENST00000253925 DACH1Q9UI36 760 aa22.6■■□□□ 1.21
PPFIA1-201ENST00000253925 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
PPFIA1-201ENST00000253925 AKAP2Q9Y2D5 859 aa22.6■■□□□ 1.21
PPFIA1-201ENST00000253925 MAPK8IP2Q13387 824 aaPredicted RBP22.59■■□□□ 1.21
PPFIA1-201ENST00000253925 SYNMO15061 1565 aa22.59■■□□□ 1.21
PPFIA1-201ENST00000253925 CCDC69A6NI79 296 aa22.59■■□□□ 1.21
PPFIA1-201ENST00000253925 CBFA2T2O43439 604 aa22.59■■□□□ 1.21
PPFIA1-201ENST00000253925 HMG20BQ9P0W2 317 aa22.59■■□□□ 1.21
PPFIA1-201ENST00000253925 FAM177BA6PVY3 158 aa22.58■■□□□ 1.21
PPFIA1-201ENST00000253925 PLXNC1O60486 1568 aa22.58■■□□□ 1.21
PPFIA1-201ENST00000253925 IFIT1P09914 478 aaKnown RBP22.58■■□□□ 1.21
PPFIA1-201ENST00000253925 ACBD3Q9H3P7 528 aa22.58■■□□□ 1.21
PPFIA1-201ENST00000253925 GNL3LQ9NVN8 582 aaKnown RBP22.58■■□□□ 1.2
PPFIA1-201ENST00000253925 EDC4Q6P2E9 1401 aaKnown RBP22.58■■□□□ 1.2
PPFIA1-201ENST00000253925 SMTNL1A8MU46 457 aa22.57■■□□□ 1.2
PPFIA1-201ENST00000253925 CTAGE5O15320 804 aa22.57■■□□□ 1.2
PPFIA1-201ENST00000253925 PIP4K2AP48426 406 aaPredicted RBP22.57■■□□□ 1.2
PPFIA1-201ENST00000253925 ANO10Q9NW15 660 aa22.57■■□□□ 1.2
PPFIA1-201ENST00000253925 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
PPFIA1-201ENST00000253925 ALDH1L1O75891 902 aa22.57■■□□□ 1.2
PPFIA1-201ENST00000253925 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
PPFIA1-201ENST00000253925 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 A0A087WZG4 1122 aa22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 SMARCE1Q969G3 411 aa22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 ANXA1P04083 346 aa22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 RBM33Q96EV2 1170 aaKnown RBP22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 INTS4Q96HW7 963 aaKnown RBP22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 ADCY5O95622 1261 aa22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 SLC3A2P08195 630 aaKnown RBP22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 MPHOSPH8Q99549 860 aa22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 PRDM15P57071 1507 aaPredicted RBP22.56■■□□□ 1.2
PPFIA1-201ENST00000253925 TXLNAP40222 546 aa22.55■■□□□ 1.2
PPFIA1-201ENST00000253925 ERVK-7P63135 1459 aa22.55■■□□□ 1.2
PPFIA1-201ENST00000253925 HSP90B2PQ58FF3 399 aa22.54■■□□□ 1.2
PPFIA1-201ENST00000253925 CKAP2LQ8IYA6 745 aa22.54■■□□□ 1.2
PPFIA1-201ENST00000253925 WASF1Q92558 559 aa22.54■■□□□ 1.2
PPFIA1-201ENST00000253925 CWC15Q9P013 229 aaKnown RBP22.54■■□□□ 1.2
PPFIA1-201ENST00000253925 ZHX1Q9UKY1 873 aaPredicted RBP22.53■■□□□ 1.2
PPFIA1-201ENST00000253925 MSH6P52701 1360 aa22.53■■□□□ 1.2
PPFIA1-201ENST00000253925 TRPM2O94759 1503 aa22.53■■□□□ 1.2
PPFIA1-201ENST00000253925 ZGPATQ8N5A5 531 aaKnown RBP22.53■■□□□ 1.2
PPFIA1-201ENST00000253925 TFIP11Q9UBB9 837 aaKnown RBP22.53■■□□□ 1.2
PPFIA1-201ENST00000253925 CHL1O00533 1208 aa22.53■■□□□ 1.2
PPFIA1-201ENST00000253925 IDH1O75874 414 aaKnown RBP22.53■■□□□ 1.2
PPFIA1-201ENST00000253925 KIF2AO00139 706 aaPredicted RBP22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 CHMLP26374 656 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms