RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SASS6Q6UVJ0 657 aa14.39□□□□□ -0.11
USHBP1-201ENST00000252597 AK2P54819 239 aa14.38□□□□□ -0.11
USHBP1-201ENST00000252597 CCDC30Q5VVM6 783 aa14.38□□□□□ -0.11
USHBP1-201ENST00000252597 NPHP1O15259 732 aa14.38□□□□□ -0.11
USHBP1-201ENST00000252597 TAF7Q15545 349 aaPredicted RBP14.38□□□□□ -0.11
USHBP1-201ENST00000252597 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
USHBP1-201ENST00000252597 EID1Q9Y6B2 187 aa14.38□□□□□ -0.11
USHBP1-201ENST00000252597 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
USHBP1-201ENST00000252597 MAP3K19Q56UN5 1328 aa14.37□□□□□ -0.11
USHBP1-201ENST00000252597 NCBP3Q53F19 620 aaKnown RBP14.37□□□□□ -0.11
USHBP1-201ENST00000252597 A0A0U1RQG5 324 aaPredicted RBP14.37□□□□□ -0.11
USHBP1-201ENST00000252597 CHAF1AQ13111 956 aaPredicted RBP14.37□□□□□ -0.11
USHBP1-201ENST00000252597 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
USHBP1-201ENST00000252597 PA2G4Q9UQ80 394 aaKnown RBP14.37□□□□□ -0.11
USHBP1-201ENST00000252597 PTPRCP08575 1304 aa14.36□□□□□ -0.11
USHBP1-201ENST00000252597 SYT1P21579 422 aa14.36□□□□□ -0.11
USHBP1-201ENST00000252597 MCM2P49736 904 aa14.36□□□□□ -0.11
USHBP1-201ENST00000252597 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
USHBP1-201ENST00000252597 C9orf78Q9NZ63 289 aaPredicted RBP14.36□□□□□ -0.11
USHBP1-201ENST00000252597 STX6O43752 255 aa14.36□□□□□ -0.11
USHBP1-201ENST00000252597 PNPLA6Q8IY17 1366 aa14.36□□□□□ -0.11
USHBP1-201ENST00000252597 GJB2P29033 226 aa14.36□□□□□ -0.11
USHBP1-201ENST00000252597 LARGE1O95461 756 aa14.35□□□□□ -0.11
USHBP1-201ENST00000252597 NBPF7P0C2Y1 421 aaPredicted RBP14.35□□□□□ -0.11
USHBP1-201ENST00000252597 TTC21BQ7Z4L5 1316 aa14.35□□□□□ -0.11
USHBP1-201ENST00000252597 IFIT2P09913 472 aaKnown RBP14.35□□□□□ -0.11
USHBP1-201ENST00000252597 EYA1Q99502 592 aa14.35□□□□□ -0.11
USHBP1-201ENST00000252597 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
USHBP1-201ENST00000252597 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
USHBP1-201ENST00000252597 BICD2Q8TD16 824 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 COL3A1P02461 1466 aaPredicted RBP14.34□□□□□ -0.11
USHBP1-201ENST00000252597 CD163L1Q9NR16 1453 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 PI4KAP2A4QPH2 592 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 HSP90B1P14625 803 aaKnown RBP14.34□□□□□ -0.11
USHBP1-201ENST00000252597 PPP4R3BQ5MIZ7 849 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 CCDC183Q5T5S1 534 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 CNTROBQ8N137 903 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 PI4KAP1Q8N8J0 262 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 PDLIM2Q96JY6 352 aa14.34□□□□□ -0.11
USHBP1-201ENST00000252597 ATP8B2P98198 1209 aa14.33□□□□□ -0.11
USHBP1-201ENST00000252597 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.11
USHBP1-201ENST00000252597 RHPN1Q8TCX5 695 aa14.33□□□□□ -0.11
USHBP1-201ENST00000252597 C16orf45Q96MC5 204 aaPredicted RBP14.33□□□□□ -0.11
USHBP1-201ENST00000252597 PDRG1Q9NUG6 133 aa14.33□□□□□ -0.11
USHBP1-201ENST00000252597 NRXN3Q9Y4C0 1643 aa14.33□□□□□ -0.12
USHBP1-201ENST00000252597 ZSCAN22P10073 491 aaPredicted RBP14.33□□□□□ -0.12
USHBP1-201ENST00000252597 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
USHBP1-201ENST00000252597 ROBO2Q9HCK4 1378 aa14.33□□□□□ -0.12
USHBP1-201ENST00000252597 PRR36Q9H6K5 1346 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 CLEC17AQ6ZS10 378 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-201ENST00000252597 SNX14Q9Y5W7 946 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 NDUFB9Q9Y6M9 179 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 KDM4AO75164 1064 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 ADCK5Q3MIX3 580 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 LUZP1Q86V48 1076 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 USP44Q9H0E7 712 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 PODXL2Q9NZ53 605 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 LIMCH1Q9UPQ0 1083 aa14.32□□□□□ -0.12
USHBP1-201ENST00000252597 DYNC1I1O14576 645 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 AACSQ86V21 672 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 CLASRPQ8N2M8 674 aaKnown RBP14.31□□□□□ -0.12
USHBP1-201ENST00000252597 ABTB2Q8N961 1025 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 KIF3AQ9Y496 699 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 MED14O60244 1454 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 UBR1Q8IWV7 1749 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 A0A087WWV3 80 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 TEFQ10587 303 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 CHPF2Q9P2E5 772 aa14.31□□□□□ -0.12
USHBP1-201ENST00000252597 GNAT3A8MTJ3 354 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 ZKSCAN1P17029 563 aaPredicted RBP14.3□□□□□ -0.12
USHBP1-201ENST00000252597 PTGS1P23219 599 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 HS1BP3Q53T59 392 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.3□□□□□ -0.12
USHBP1-201ENST00000252597 AMOTL2Q9Y2J4 779 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 V9GYY5 206 aaPredicted RBP14.3□□□□□ -0.12
USHBP1-201ENST00000252597 KCNQ3O43525 872 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 PTH1RQ03431 593 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 MPRIPQ6WCQ1 1025 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 RUFY3Q7L099 469 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 KLHDC4Q8TBB5 520 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 PYCARDQ9ULZ3 195 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 SETD1AO15047 1707 aaKnown RBP14.3□□□□□ -0.12
USHBP1-201ENST00000252597 PIK3R4Q99570 1358 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 F13A1P00488 732 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 THEMISQ8N1K5 641 aaPredicted RBP14.3□□□□□ -0.12
USHBP1-201ENST00000252597 ATP6V1DQ9Y5K8 247 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 CYP46A1Q9Y6A2 500 aa14.3□□□□□ -0.12
USHBP1-201ENST00000252597 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
USHBP1-201ENST00000252597 SOS1Q07889 1333 aaPredicted RBP14.29□□□□□ -0.12
USHBP1-201ENST00000252597 ADAMTS13Q76LX8 1427 aa14.29□□□□□ -0.12
USHBP1-201ENST00000252597 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
USHBP1-201ENST00000252597 LRMPQ12912 555 aa14.29□□□□□ -0.12
USHBP1-201ENST00000252597 MAP7D2Q96T17 732 aa14.29□□□□□ -0.12
USHBP1-201ENST00000252597 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms