RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ARHGAP29Q52LW3 1261 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 ANKRD65E5RJM6 399 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 SEC31AO94979 1220 aaKnown RBP21.68■■□□□ 1.06
PTPN12-201ENST00000248594 ZNF75DP51815 510 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 ST5P78524 1137 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 NECTIN2Q92692 538 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 ATP6V1DQ9Y5K8 247 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 F6X3S4 739 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 CEP85Q6P2H3 762 aa21.68■■□□□ 1.06
PTPN12-201ENST00000248594 SLU7O95391 586 aaKnown RBP21.67■■□□□ 1.06
PTPN12-201ENST00000248594 GJB2P29033 226 aa21.67■■□□□ 1.06
PTPN12-201ENST00000248594 CCAR2Q8N163 923 aaKnown RBP21.67■■□□□ 1.06
PTPN12-201ENST00000248594 ZNF446Q9NWS9 450 aa21.67■■□□□ 1.06
PTPN12-201ENST00000248594 MRVI1Q9Y6F6 885 aa21.67■■□□□ 1.06
PTPN12-201ENST00000248594 EIF2AK4Q9P2K8 1649 aaKnown RBP21.67■■□□□ 1.06
PTPN12-201ENST00000248594 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
PTPN12-201ENST00000248594 ARHGAP31Q2M1Z3 1444 aa21.67■■□□□ 1.06
PTPN12-201ENST00000248594 INTS4Q96HW7 963 aaKnown RBP21.67■■□□□ 1.06
PTPN12-201ENST00000248594 EPC1Q9H2F5 836 aa21.67■■□□□ 1.06
PTPN12-201ENST00000248594 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
PTPN12-201ENST00000248594 LCMT1Q9UIC8 334 aa21.67■■□□□ 1.06
PTPN12-201ENST00000248594 BECN2A8MW95 431 aa21.66■■□□□ 1.06
PTPN12-201ENST00000248594 ANKRD44Q8N8A2 993 aa21.66■■□□□ 1.06
PTPN12-201ENST00000248594 HAP1P54257 671 aaPredicted RBP21.66■■□□□ 1.06
PTPN12-201ENST00000248594 TAOK2Q9UL54 1235 aa21.66■■□□□ 1.06
PTPN12-201ENST00000248594 CYP2C19P33261 490 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 AK2P54819 239 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 UNC5CLQ8IV45 518 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 FAM69CQ0P6D2 419 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 MIS18AQ9NYP9 233 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 LMAN1P49257 510 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 ZNF518AQ6AHZ1 1483 aa21.65■■□□□ 1.06
PTPN12-201ENST00000248594 TULP2O00295 520 aa21.64■■□□□ 1.06
PTPN12-201ENST00000248594 NCKAP5LQ9HCH0 1330 aa21.64■■□□□ 1.05
PTPN12-201ENST00000248594 ERCC4Q92889 916 aaPredicted RBP21.64■■□□□ 1.05
PTPN12-201ENST00000248594 DRC1Q96MC2 740 aa21.64■■□□□ 1.05
PTPN12-201ENST00000248594 SPG7Q9UQ90 795 aa21.64■■□□□ 1.05
PTPN12-201ENST00000248594 CLCN6P51797 869 aa21.64■■□□□ 1.05
PTPN12-201ENST00000248594 TCEANC2Q96MN5 208 aa21.64■■□□□ 1.05
PTPN12-201ENST00000248594 FUCA2Q9BTY2 467 aa21.64■■□□□ 1.05
PTPN12-201ENST00000248594 LARGE1O95461 756 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 ERO1AQ96HE7 468 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 FMNL2Q96PY5 1086 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 CABP1Q9NZU7 370 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 CCDC69A6NI79 296 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 TMCO3Q6UWJ1 677 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 NUTM1Q86Y26 1132 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 TSPYL1Q9H0U9 437 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 IL25Q9H293 177 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 ADGRL1O94910 1474 aa21.63■■□□□ 1.05
PTPN12-201ENST00000248594 CASTP20810 708 aaKnown RBP21.62■■□□□ 1.05
PTPN12-201ENST00000248594 RRS1Q15050 365 aaKnown RBP21.62■■□□□ 1.05
PTPN12-201ENST00000248594 ATP10AO60312 1499 aa21.62■■□□□ 1.05
PTPN12-201ENST00000248594 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
PTPN12-201ENST00000248594 GNAI1P63096 354 aa21.62■■□□□ 1.05
PTPN12-201ENST00000248594 SMARCE1Q969G3 411 aa21.62■■□□□ 1.05
PTPN12-201ENST00000248594 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
PTPN12-201ENST00000248594 PTPRTO14522 1441 aa21.62■■□□□ 1.05
PTPN12-201ENST00000248594 RAPGEF3O95398 923 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 TTC6Q86TZ1 520 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 MAST1Q9Y2H9 1570 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 HMMRO75330 724 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 CHMLP26374 656 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 MNS1Q8NEH6 495 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 EMILIN1Q9Y6C2 1016 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 STK3Q13188 491 aa21.61■■□□□ 1.05
PTPN12-201ENST00000248594 LARP1BQ659C4 914 aaKnown RBP21.61■■□□□ 1.05
PTPN12-201ENST00000248594 PNMA6AP0CW24 399 aaPredicted RBP21.6■■□□□ 1.05
PTPN12-201ENST00000248594 ZSCAN26Q16670 478 aa21.6■■□□□ 1.05
PTPN12-201ENST00000248594 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.6■■□□□ 1.05
PTPN12-201ENST00000248594 RAD50Q92878 1312 aa21.6■■□□□ 1.05
PTPN12-201ENST00000248594 MYO1CO00159 1063 aa21.6■■□□□ 1.05
PTPN12-201ENST00000248594 UBXN4Q92575 508 aa21.6■■□□□ 1.05
PTPN12-201ENST00000248594 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
PTPN12-201ENST00000248594 SART3Q15020 963 aaKnown RBP21.6■■□□□ 1.05
PTPN12-201ENST00000248594 SYCP1Q15431 976 aa21.6■■□□□ 1.05
PTPN12-201ENST00000248594 WAPLQ7Z5K2 1190 aa21.6■■□□□ 1.05
PTPN12-201ENST00000248594 ABCC4O15439 1325 aa21.59■■□□□ 1.05
PTPN12-201ENST00000248594 RPAP1Q9BWH6 1393 aaPredicted RBP21.59■■□□□ 1.05
PTPN12-201ENST00000248594 CWC27Q6UX04 472 aaKnown RBP21.59■■□□□ 1.05
PTPN12-201ENST00000248594 RPAP2Q8IXW5 612 aaPredicted RBP21.59■■□□□ 1.05
PTPN12-201ENST00000248594 SNW1Q13573 536 aaKnown RBP21.59■■□□□ 1.05
PTPN12-201ENST00000248594 EP400NLQ6ZTU2 488 aa21.59■■□□□ 1.05
PTPN12-201ENST00000248594 IL16Q14005 1332 aa21.59■■□□□ 1.05
PTPN12-201ENST00000248594 PPFIA3O75145 1194 aa21.58■■□□□ 1.05
PTPN12-201ENST00000248594 LRRC8AQ8IWT6 810 aa21.58■■□□□ 1.05
PTPN12-201ENST00000248594 KRT85P78386 507 aa21.58■■□□□ 1.05
PTPN12-201ENST00000248594 E2F4Q16254 413 aa21.58■■□□□ 1.05
PTPN12-201ENST00000248594 GPS2Q13227 327 aa21.58■■□□□ 1.04
PTPN12-201ENST00000248594 DHX16O60231 1041 aaKnown RBP21.57■■□□□ 1.04
PTPN12-201ENST00000248594 RASEFQ8IZ41 740 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 SPATA32Q96LK8 384 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 URI1O94763 535 aaPredicted RBP21.57■■□□□ 1.04
PTPN12-201ENST00000248594 TPM4P67936 248 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 ARHGAP45Q92619 1136 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 LIMCH1Q9UPQ0 1083 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 KDM5AP29375 1690 aaKnown RBP21.57■■□□□ 1.04
PTPN12-201ENST00000248594 OAS2P29728 719 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms