RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 MEGF6O75095 1541 aa11.73□□□□□ -0.53
EXOSC9-201ENST00000243498 EXOC5O00471 708 aa11.72□□□□□ -0.53
EXOSC9-201ENST00000243498 RNMTO43148 476 aaKnown RBP11.72□□□□□ -0.53
EXOSC9-201ENST00000243498 EXOSC9Q06265 439 aaKnown RBP11.72□□□□□ -0.53
EXOSC9-201ENST00000243498 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
EXOSC9-201ENST00000243498 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
EXOSC9-201ENST00000243498 SOS1Q07889 1333 aaPredicted RBP11.72□□□□□ -0.53
EXOSC9-201ENST00000243498 VPS72Q15906 364 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 ERICH6BQ5W0A0 696 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 MPRIPQ6WCQ1 1025 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 BARGINQ6ZT62 677 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 TSR2Q969E8 191 aaKnown RBP11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 MBIPQ9NS73 344 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 USP21Q9UK80 565 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 SPATA31A1Q5TZJ5 1347 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.53
EXOSC9-201ENST00000243498 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 MS4A1P11836 297 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 EMP3P54852 163 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 MICALL2Q8IY33 904 aa11.7□□□□□ -0.54
EXOSC9-201ENST00000243498 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 NKX1-1Q15270 411 aaPredicted RBP11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 DDB1Q16531 1140 aa11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 TWISTNBQ3B726 338 aaPredicted RBP11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 LGR6Q9HBX8 967 aa11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 ADAMTS7Q9UKP4 1686 aa11.69□□□□□ -0.54
EXOSC9-201ENST00000243498 LRP6O75581 1613 aa11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 CYP27B1O15528 508 aa11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 CANXP27824 592 aaKnown RBP11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 CABP4P57796 275 aa11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 DDX54Q8TDD1 881 aaKnown RBP11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 TRPC5Q9UL62 973 aaPredicted RBP11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
EXOSC9-201ENST00000243498 DISP2A7MBM2 1401 aa11.67□□□□□ -0.54
EXOSC9-201ENST00000243498 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
EXOSC9-201ENST00000243498 RARSP54136 660 aaKnown RBP11.67□□□□□ -0.54
EXOSC9-201ENST00000243498 MS4A4AQ96JQ5 239 aa11.67□□□□□ -0.54
EXOSC9-201ENST00000243498 SLC52A2Q9HAB3 445 aa11.67□□□□□ -0.54
EXOSC9-201ENST00000243498 BCL9LQ86UU0 1499 aa11.66□□□□□ -0.54
EXOSC9-201ENST00000243498 STK25O00506 426 aa11.66□□□□□ -0.54
EXOSC9-201ENST00000243498 VAMP4O75379 141 aa11.66□□□□□ -0.54
EXOSC9-201ENST00000243498 HOXB7P09629 217 aa11.66□□□□□ -0.54
EXOSC9-201ENST00000243498 CACNA1FO60840 1977 aa11.66□□□□□ -0.54
EXOSC9-201ENST00000243498 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 AFF2P51816 1311 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 KIF16BQ96L93 1317 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 DOK7Q18PE1 504 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 TTC5Q8N0Z6 440 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 KDM3BQ7LBC6 1761 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 TNS2Q63HR2 1409 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 SHANK3Q9BYB0 1731 aa11.65□□□□□ -0.54
EXOSC9-201ENST00000243498 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
EXOSC9-201ENST00000243498 ZNF772Q68DY9 489 aaPredicted RBP11.64□□□□□ -0.55
EXOSC9-201ENST00000243498 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
EXOSC9-201ENST00000243498 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 HOXB3P14651 431 aaPredicted RBP11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 CCDC30Q5VVM6 783 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 C8orf58Q8NAV2 365 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 NFATC2IPQ8NCF5 419 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 MRC1P22897 1456 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 KDM6AO15550 1401 aaPredicted RBP11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 A0A0G2JS52 829 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 MYT1Q01538 1121 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 PDE3AQ14432 1141 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 ZNF790Q6PG37 636 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 TMOD3Q9NYL9 352 aa11.63□□□□□ -0.55
EXOSC9-201ENST00000243498 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
EXOSC9-201ENST00000243498 BCAR3O75815 825 aa11.62□□□□□ -0.55
EXOSC9-201ENST00000243498 FAM98CQ17RN3 349 aaKnown RBP11.62□□□□□ -0.55
EXOSC9-201ENST00000243498 TSPYL6Q8N831 410 aa11.62□□□□□ -0.55
EXOSC9-201ENST00000243498 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
EXOSC9-201ENST00000243498 ARHGAP45Q92619 1136 aa11.62□□□□□ -0.55
EXOSC9-201ENST00000243498 FRAT1Q92837 279 aaPredicted RBP11.62□□□□□ -0.55
EXOSC9-201ENST00000243498 RIMBP2O15034 1052 aa11.61□□□□□ -0.55
EXOSC9-201ENST00000243498 ATRNO75882 1429 aa11.61□□□□□ -0.55
EXOSC9-201ENST00000243498 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
EXOSC9-201ENST00000243498 CHMP4BQ9H444 224 aaKnown RBP11.61□□□□□ -0.55
EXOSC9-201ENST00000243498 QTRT2Q9H974 415 aaKnown RBP11.61□□□□□ -0.55
EXOSC9-201ENST00000243498 RGL2O15211 777 aa11.6□□□□□ -0.55
EXOSC9-201ENST00000243498 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms