RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 LETM1O95202 739 aaPredicted RBP18.68■□□□□ 0.58
DDX55-201ENST00000238146 MAP4K4O95819 1239 aaPredicted RBP18.68■□□□□ 0.58
DDX55-201ENST00000238146 UBE2HP62256 183 aa18.68■□□□□ 0.58
DDX55-201ENST00000238146 TPRNQ4KMQ1 711 aa18.68■□□□□ 0.58
DDX55-201ENST00000238146 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
DDX55-201ENST00000238146 SGSM2O43147 1006 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 SYT1P21579 422 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 C17orf53Q8N3J3 647 aaPredicted RBP18.67■□□□□ 0.58
DDX55-201ENST00000238146 STX6O43752 255 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 AK2P54819 239 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 SSH3Q8TE77 659 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 PLEKHG3A1L390 1219 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 NUTM2FA1L443 756 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 RASEFQ8IZ41 740 aa18.67■□□□□ 0.58
DDX55-201ENST00000238146 LARP6Q9BRS8 491 aaKnown RBP18.67■□□□□ 0.58
DDX55-201ENST00000238146 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
DDX55-201ENST00000238146 RIMS1Q86UR5 1692 aaKnown RBP18.66■□□□□ 0.58
DDX55-201ENST00000238146 USP6P35125 1406 aa18.66■□□□□ 0.58
DDX55-201ENST00000238146 RUFY3Q7L099 469 aa18.66■□□□□ 0.58
DDX55-201ENST00000238146 PI4K2BQ8TCG2 481 aa18.66■□□□□ 0.58
DDX55-201ENST00000238146 TSC1Q92574 1164 aa18.66■□□□□ 0.58
DDX55-201ENST00000238146 KDRP35968 1356 aa18.66■□□□□ 0.58
DDX55-201ENST00000238146 ROBO2Q9HCK4 1378 aa18.66■□□□□ 0.58
DDX55-201ENST00000238146 KDM4AO75164 1064 aa18.66■□□□□ 0.58
DDX55-201ENST00000238146 UBTFL1P0CB47 393 aaPredicted RBP18.66■□□□□ 0.58
DDX55-201ENST00000238146 HMGN5P82970 282 aaKnown RBP18.66■□□□□ 0.58
DDX55-201ENST00000238146 SMAP1Q8IYB5 467 aaPredicted RBP18.66■□□□□ 0.58
DDX55-201ENST00000238146 LSG1Q9H089 658 aaKnown RBP18.66■□□□□ 0.58
DDX55-201ENST00000238146 F13A1P00488 732 aa18.65■□□□□ 0.58
DDX55-201ENST00000238146 GTF2F1P35269 517 aaKnown RBP eCLIP18.65■□□□□ 0.58
DDX55-201ENST00000238146 CCDC94Q9BW85 323 aaPredicted RBP18.65■□□□□ 0.58
DDX55-201ENST00000238146 SPTLC3Q9NUV7 552 aa18.65■□□□□ 0.58
DDX55-201ENST00000238146 LIMCH1Q9UPQ0 1083 aa18.65■□□□□ 0.58
DDX55-201ENST00000238146 NALCNQ8IZF0 1738 aa18.65■□□□□ 0.58
DDX55-201ENST00000238146 EYA1Q99502 592 aa18.65■□□□□ 0.58
DDX55-201ENST00000238146 FUCA2Q9BTY2 467 aa18.65■□□□□ 0.58
DDX55-201ENST00000238146 FIBPO43427 364 aa18.64■□□□□ 0.57
DDX55-201ENST00000238146 ZNF710Q8N1W2 664 aa18.64■□□□□ 0.57
DDX55-201ENST00000238146 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.64■□□□□ 0.57
DDX55-201ENST00000238146 RAB11FIP3O75154 756 aa18.64■□□□□ 0.57
DDX55-201ENST00000238146 SURF6O75683 361 aaKnown RBP18.64■□□□□ 0.57
DDX55-201ENST00000238146 PPP1R42Q7Z4L9 355 aa18.63■□□□□ 0.57
DDX55-201ENST00000238146 SMC3Q9UQE7 1217 aa18.63■□□□□ 0.57
DDX55-201ENST00000238146 GIMAP6Q6P9H5 292 aa18.63■□□□□ 0.57
DDX55-201ENST00000238146 RHPN1Q8TCX5 695 aa18.63■□□□□ 0.57
DDX55-201ENST00000238146 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
DDX55-201ENST00000238146 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
DDX55-201ENST00000238146 MLECQ14165 292 aa18.62■□□□□ 0.57
DDX55-201ENST00000238146 ATP6V1DQ9Y5K8 247 aa18.62■□□□□ 0.57
DDX55-201ENST00000238146 IGSF1Q8N6C5 1336 aa18.62■□□□□ 0.57
DDX55-201ENST00000238146 POLA2Q14181 598 aa18.62■□□□□ 0.57
DDX55-201ENST00000238146 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
DDX55-201ENST00000238146 FLT4P35916 1363 aa18.62■□□□□ 0.57
DDX55-201ENST00000238146 AGLP35573 1532 aa18.61■□□□□ 0.57
DDX55-201ENST00000238146 AP5Z1O43299 807 aa18.61■□□□□ 0.57
DDX55-201ENST00000238146 LARGE1O95461 756 aa18.61■□□□□ 0.57
DDX55-201ENST00000238146 CPA1P15085 419 aa18.61■□□□□ 0.57
DDX55-201ENST00000238146 SBNO1A3KN83 1393 aa18.61■□□□□ 0.57
DDX55-201ENST00000238146 PLCB2Q00722 1185 aa18.6■□□□□ 0.57
DDX55-201ENST00000238146 CNTROBQ8N137 903 aa18.6■□□□□ 0.57
DDX55-201ENST00000238146 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
DDX55-201ENST00000238146 PXDNLA1KZ92 1463 aa18.6■□□□□ 0.57
DDX55-201ENST00000238146 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
DDX55-201ENST00000238146 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
DDX55-201ENST00000238146 DNM1Q05193 864 aaKnown RBP18.59■□□□□ 0.57
DDX55-201ENST00000238146 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
DDX55-201ENST00000238146 KIF1BPQ96EK5 621 aa18.59■□□□□ 0.57
DDX55-201ENST00000238146 HYPKQ9NX55 129 aa18.59■□□□□ 0.57
DDX55-201ENST00000238146 DTNBO60941 627 aa18.59■□□□□ 0.57
DDX55-201ENST00000238146 CASTP20810 708 aaKnown RBP18.59■□□□□ 0.57
DDX55-201ENST00000238146 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
DDX55-201ENST00000238146 MTMR6Q9Y217 621 aa18.59■□□□□ 0.57
DDX55-201ENST00000238146 KIF3AQ9Y496 699 aa18.59■□□□□ 0.57
DDX55-201ENST00000238146 GJB2P29033 226 aa18.58■□□□□ 0.57
DDX55-201ENST00000238146 HDGFP51858 240 aaKnown RBP18.58■□□□□ 0.57
DDX55-201ENST00000238146 IL17REQ8NFR9 667 aa18.58■□□□□ 0.57
DDX55-201ENST00000238146 KIAA1524Q8TCG1 905 aa18.58■□□□□ 0.57
DDX55-201ENST00000238146 PRDM10Q9NQV6 1147 aa18.58■□□□□ 0.57
DDX55-201ENST00000238146 TOPAZ1Q8N9V7 1692 aa18.58■□□□□ 0.57
DDX55-201ENST00000238146 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.56
DDX55-201ENST00000238146 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
DDX55-201ENST00000238146 AMPHP49418 695 aa18.58■□□□□ 0.56
DDX55-201ENST00000238146 CCDC83Q8IWF9 413 aa18.58■□□□□ 0.56
DDX55-201ENST00000238146 KCNF1Q9H3M0 494 aa18.58■□□□□ 0.56
DDX55-201ENST00000238146 FAM177BA6PVY3 158 aa18.57■□□□□ 0.56
DDX55-201ENST00000238146 LRRC37A3O60309 1634 aa18.57■□□□□ 0.56
DDX55-201ENST00000238146 N4BP2Q86UW6 1770 aaPredicted RBP18.57■□□□□ 0.56
DDX55-201ENST00000238146 CACNA1FO60840 1977 aa18.57■□□□□ 0.56
DDX55-201ENST00000238146 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
DDX55-201ENST00000238146 PYCARDQ9ULZ3 195 aa18.57■□□□□ 0.56
DDX55-201ENST00000238146 TAF7Q15545 349 aaPredicted RBP18.56■□□□□ 0.56
DDX55-201ENST00000238146 HDGFL1Q5TGJ6 251 aa18.56■□□□□ 0.56
DDX55-201ENST00000238146 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
DDX55-201ENST00000238146 TTC21AQ8NDW8 1320 aa18.56■□□□□ 0.56
DDX55-201ENST00000238146 NBPF7P0C2Y1 421 aaPredicted RBP18.56■□□□□ 0.56
DDX55-201ENST00000238146 ADCK5Q3MIX3 580 aa18.56■□□□□ 0.56
DDX55-201ENST00000238146 VPS53Q5VIR6 699 aa18.55■□□□□ 0.56
DDX55-201ENST00000238146 PTH1RQ03431 593 aa18.55■□□□□ 0.56
DDX55-201ENST00000238146 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
DDX55-201ENST00000238146 PDRG1Q9NUG6 133 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms