RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 HSPA6P17066 643 aa24.25■■□□□ 1.47
APH1A-201ENST00000236017 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
APH1A-201ENST00000236017 IL17REQ8NFR9 667 aa24.25■■□□□ 1.47
APH1A-201ENST00000236017 TEX13AQ9BXU3 409 aaPredicted RBP24.25■■□□□ 1.47
APH1A-201ENST00000236017 COL15A1P39059 1388 aa24.25■■□□□ 1.47
APH1A-201ENST00000236017 CHRNA5P30532 468 aa24.24■■□□□ 1.47
APH1A-201ENST00000236017 NFIXQ14938 502 aa24.24■■□□□ 1.47
APH1A-201ENST00000236017 N4BP2Q86UW6 1770 aaPredicted RBP24.24■■□□□ 1.47
APH1A-201ENST00000236017 A0A087WZG4 1122 aa24.23■■□□□ 1.47
APH1A-201ENST00000236017 NUDCQ9Y266 331 aa24.23■■□□□ 1.47
APH1A-201ENST00000236017 KCPQ6ZWJ8 1503 aa24.23■■□□□ 1.47
APH1A-201ENST00000236017 KIAA1551Q9HCM1 1747 aa24.23■■□□□ 1.47
APH1A-201ENST00000236017 COL3A1P02461 1466 aaPredicted RBP24.22■■□□□ 1.47
APH1A-201ENST00000236017 C9orf131Q5VYM1 1079 aa24.22■■□□□ 1.47
APH1A-201ENST00000236017 ZNF790Q6PG37 636 aa24.22■■□□□ 1.47
APH1A-201ENST00000236017 SERPINB2P05120 415 aa24.21■■□□□ 1.47
APH1A-201ENST00000236017 ZNF496Q96IT1 587 aaPredicted RBP24.21■■□□□ 1.47
APH1A-201ENST00000236017 EIF5P55010 431 aaKnown RBP24.2■■□□□ 1.46
APH1A-201ENST00000236017 BCL2L12Q9HB09 334 aa24.2■■□□□ 1.46
APH1A-201ENST00000236017 PRKAR2BP31323 418 aa24.19■■□□□ 1.46
APH1A-201ENST00000236017 HEG1Q9ULI3 1381 aa24.18■■□□□ 1.46
APH1A-201ENST00000236017 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
APH1A-201ENST00000236017 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
APH1A-201ENST00000236017 FMNL2Q96PY5 1086 aa24.18■■□□□ 1.46
APH1A-201ENST00000236017 TOMM70O94826 608 aa24.17■■□□□ 1.46
APH1A-201ENST00000236017 PHACTR3Q96KR7 559 aa24.17■■□□□ 1.46
APH1A-201ENST00000236017 RSPH6AQ9H0K4 717 aa24.17■■□□□ 1.46
APH1A-201ENST00000236017 BICDL1Q6ZP65 573 aa24.16■■□□□ 1.46
APH1A-201ENST00000236017 RNF181Q9P0P0 153 aa24.16■■□□□ 1.46
APH1A-201ENST00000236017 BTBD11A6QL63 1104 aa24.15■■□□□ 1.46
APH1A-201ENST00000236017 U2AF1L5P0DN76 240 aaPredicted RBP24.15■■□□□ 1.46
APH1A-201ENST00000236017 U2AF1Q01081 240 aaKnown RBP eCLIP24.15■■□□□ 1.46
APH1A-201ENST00000236017 NMRK2Q9NPI5 230 aa24.15■■□□□ 1.46
APH1A-201ENST00000236017 IL6STP40189 918 aaPredicted RBP24.14■■□□□ 1.45
APH1A-201ENST00000236017 ZNF330Q9Y3S2 320 aaPredicted RBP24.14■■□□□ 1.45
APH1A-201ENST00000236017 CEMIPQ8WUJ3 1361 aa24.14■■□□□ 1.45
APH1A-201ENST00000236017 H0YIN7 160 aa24.13■■□□□ 1.45
APH1A-201ENST00000236017 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
APH1A-201ENST00000236017 C2CD5Q86YS7 1000 aa24.13■■□□□ 1.45
APH1A-201ENST00000236017 TTLL6Q8N841 843 aa24.13■■□□□ 1.45
APH1A-201ENST00000236017 RTF1Q92541 710 aaKnown RBP24.13■■□□□ 1.45
APH1A-201ENST00000236017 TBC1D2BQ9UPU7 963 aa24.13■■□□□ 1.45
APH1A-201ENST00000236017 KDM2BQ8NHM5 1336 aa24.12■■□□□ 1.45
APH1A-201ENST00000236017 C16orf71Q8IYS4 520 aaPredicted RBP24.12■■□□□ 1.45
APH1A-201ENST00000236017 TBC1D9BQ66K14 1250 aa24.11■■□□□ 1.45
APH1A-201ENST00000236017 PDZRN3Q9UPQ7 1066 aa24.11■■□□□ 1.45
APH1A-201ENST00000236017 BRCA1P38398 1863 aaKnown RBP24.11■■□□□ 1.45
APH1A-201ENST00000236017 KCNQ3O43525 872 aa24.1■■□□□ 1.45
APH1A-201ENST00000236017 A1BGP04217 495 aa24.1■■□□□ 1.45
APH1A-201ENST00000236017 APLP1P51693 650 aa24.1■■□□□ 1.45
APH1A-201ENST00000236017 ARFGEF1Q9Y6D6 1849 aa24.08■■□□□ 1.45
APH1A-201ENST00000236017 PDE6BP35913 854 aa24.08■■□□□ 1.45
APH1A-201ENST00000236017 RBM46Q8TBY0 533 aaKnown RBP24.08■■□□□ 1.45
APH1A-201ENST00000236017 BRIP1Q9BX63 1249 aa24.08■■□□□ 1.45
APH1A-201ENST00000236017 UBR2Q8IWV8 1755 aa24.08■■□□□ 1.44
APH1A-201ENST00000236017 SETDB2Q96T68 719 aa24.07■■□□□ 1.44
APH1A-201ENST00000236017 VIRMAQ69YN4 1812 aaKnown RBP24.06■■□□□ 1.44
APH1A-201ENST00000236017 HTATSF1O43719 755 aaKnown RBP24.06■■□□□ 1.44
APH1A-201ENST00000236017 LMNB1P20700 586 aa24.06■■□□□ 1.44
APH1A-201ENST00000236017 MCM10Q7L590 875 aa24.06■■□□□ 1.44
APH1A-201ENST00000236017 ZNF622Q969S3 477 aaKnown RBP eCLIP24.06■■□□□ 1.44
APH1A-201ENST00000236017 USP16Q9Y5T5 823 aa24.06■■□□□ 1.44
APH1A-201ENST00000236017 ZC3H4Q9UPT8 1303 aaKnown RBP24.06■■□□□ 1.44
APH1A-201ENST00000236017 NPHP1O15259 732 aa24.05■■□□□ 1.44
APH1A-201ENST00000236017 SNRPA1P09661 255 aaKnown RBP24.05■■□□□ 1.44
APH1A-201ENST00000236017 RASSF7Q02833 373 aa24.05■■□□□ 1.44
APH1A-201ENST00000236017 DZIP3Q86Y13 1208 aaKnown RBP24.05■■□□□ 1.44
APH1A-201ENST00000236017 RRAGCQ9HB90 399 aa24.05■■□□□ 1.44
APH1A-201ENST00000236017 CARMIL3Q8ND23 1372 aa24.04■■□□□ 1.44
APH1A-201ENST00000236017 CAMTA2O94983 1202 aa24.04■■□□□ 1.44
APH1A-201ENST00000236017 PRR5LQ6MZQ0 368 aa24.04■■□□□ 1.44
APH1A-201ENST00000236017 NEFMP07197 916 aa24.03■■□□□ 1.44
APH1A-201ENST00000236017 NRXN2Q9P2S2 1712 aa24.03■■□□□ 1.44
APH1A-201ENST00000236017 FSTL1Q12841 308 aa24.02■■□□□ 1.44
APH1A-201ENST00000236017 AFDNP55196 1824 aaKnown RBP24.01■■□□□ 1.43
APH1A-201ENST00000236017 ST5P78524 1137 aa24.01■■□□□ 1.43
APH1A-201ENST00000236017 DCTN1Q14203 1278 aa24.01■■□□□ 1.43
APH1A-201ENST00000236017 CLEC4GQ6UXB4 293 aa24.01■■□□□ 1.43
APH1A-201ENST00000236017 CCDC24Q8N4L8 307 aa24.01■■□□□ 1.43
APH1A-201ENST00000236017 CNBD1Q8NA66 436 aa24.01■■□□□ 1.43
APH1A-201ENST00000236017 CEP350Q5VT06 3117 aa24.01■■□□□ 1.43
APH1A-201ENST00000236017 TAF7Q15545 349 aaPredicted RBP24■■□□□ 1.43
APH1A-201ENST00000236017 PRAMEF22A3QJZ6 481 aa23.99■■□□□ 1.43
APH1A-201ENST00000236017 GLTPD2A6NH11 291 aa23.99■■□□□ 1.43
APH1A-201ENST00000236017 PIP4K2AP48426 406 aaPredicted RBP23.99■■□□□ 1.43
APH1A-201ENST00000236017 CNKSR1Q969H4 720 aa23.99■■□□□ 1.43
APH1A-201ENST00000236017 ZNF652Q9Y2D9 606 aa23.99■■□□□ 1.43
APH1A-201ENST00000236017 C21orf2O43822 256 aa23.98■■□□□ 1.43
APH1A-201ENST00000236017 SIPA1L3O60292 1781 aaPredicted RBP23.98■■□□□ 1.43
APH1A-201ENST00000236017 NFKBIEO00221 500 aa23.97■■□□□ 1.43
APH1A-201ENST00000236017 PRELPP51888 382 aa23.97■■□□□ 1.43
APH1A-201ENST00000236017 ZNF219Q9P2Y4 722 aaPredicted RBP23.97■■□□□ 1.43
APH1A-201ENST00000236017 VEGFAP15692 232 aaPredicted RBP23.96■■□□□ 1.43
APH1A-201ENST00000236017 STYK1Q6J9G0 422 aa23.96■■□□□ 1.43
APH1A-201ENST00000236017 NBPF5PQ86XG9 351 aaPredicted RBP23.96■■□□□ 1.43
APH1A-201ENST00000236017 DNAJC5GQ8N7S2 189 aa23.96■■□□□ 1.43
APH1A-201ENST00000236017 DPY19L2Q6NUT2 758 aa23.95■■□□□ 1.42
APH1A-201ENST00000236017 SMC1BQ8NDV3 1235 aa23.95■■□□□ 1.42
APH1A-201ENST00000236017 PNISRQ8TF01 805 aaKnown RBP23.95■■□□□ 1.42
APH1A-201ENST00000236017 MASTLQ96GX5 879 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms