RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ATG3Q9NT62 314 aa14.85□□□□□ -0.03
SF3B6-201ENST00000233468 ASAP1Q9ULH1 1129 aa14.85□□□□□ -0.03
SF3B6-201ENST00000233468 GIGYF1O75420 1035 aaPredicted RBP14.84□□□□□ -0.03
SF3B6-201ENST00000233468 TTC5Q8N0Z6 440 aa14.84□□□□□ -0.03
SF3B6-201ENST00000233468 AK7Q96M32 723 aa14.84□□□□□ -0.03
SF3B6-201ENST00000233468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.83□□□□□ -0.04
SF3B6-201ENST00000233468 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
SF3B6-201ENST00000233468 GRIN3BO60391 1043 aa14.83□□□□□ -0.04
SF3B6-201ENST00000233468 SIK1P57059 783 aa14.83□□□□□ -0.04
SF3B6-201ENST00000233468 ITPK1Q13572 414 aa14.83□□□□□ -0.04
SF3B6-201ENST00000233468 FLAD1Q8NFF5 587 aa14.83□□□□□ -0.04
SF3B6-201ENST00000233468 IL17REQ8NFR9 667 aa14.83□□□□□ -0.04
SF3B6-201ENST00000233468 CD2APQ9Y5K6 639 aa14.83□□□□□ -0.04
SF3B6-201ENST00000233468 ATP6V1AP38606 617 aa14.82□□□□□ -0.04
SF3B6-201ENST00000233468 RIPK4P57078 832 aa14.82□□□□□ -0.04
SF3B6-201ENST00000233468 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
SF3B6-201ENST00000233468 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
SF3B6-201ENST00000233468 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
SF3B6-201ENST00000233468 CEMIPQ8WUJ3 1361 aa14.81□□□□□ -0.04
SF3B6-201ENST00000233468 BTBD11A6QL63 1104 aa14.8□□□□□ -0.04
SF3B6-201ENST00000233468 TMPOP42166 694 aaKnown RBP14.8□□□□□ -0.04
SF3B6-201ENST00000233468 MCM10Q7L590 875 aa14.8□□□□□ -0.04
SF3B6-201ENST00000233468 ATP10DQ9P241 1426 aa14.8□□□□□ -0.04
SF3B6-201ENST00000233468 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
SF3B6-201ENST00000233468 GNPATO15228 680 aa14.79□□□□□ -0.04
SF3B6-201ENST00000233468 PTCD1O75127 700 aaKnown RBP14.79□□□□□ -0.04
SF3B6-201ENST00000233468 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
SF3B6-201ENST00000233468 SLC4A9Q96Q91 983 aa14.79□□□□□ -0.04
SF3B6-201ENST00000233468 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
SF3B6-201ENST00000233468 MRC1P22897 1456 aa14.78□□□□□ -0.04
SF3B6-201ENST00000233468 CCER2I3L3R5 266 aa14.78□□□□□ -0.04
SF3B6-201ENST00000233468 SSFA2P28290 1259 aa14.78□□□□□ -0.04
SF3B6-201ENST00000233468 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
SF3B6-201ENST00000233468 ZNF790Q6PG37 636 aa14.78□□□□□ -0.04
SF3B6-201ENST00000233468 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
SF3B6-201ENST00000233468 ZNF526Q8TF50 670 aaPredicted RBP14.78□□□□□ -0.04
SF3B6-201ENST00000233468 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
SF3B6-201ENST00000233468 CALD1Q05682 793 aaKnown RBP14.77□□□□□ -0.05
SF3B6-201ENST00000233468 DCTN1Q14203 1278 aa14.77□□□□□ -0.05
SF3B6-201ENST00000233468 NEUROD2Q15784 382 aa14.77□□□□□ -0.05
SF3B6-201ENST00000233468 TEX13AQ9BXU3 409 aaPredicted RBP14.77□□□□□ -0.05
SF3B6-201ENST00000233468 KIAA1551Q9HCM1 1747 aa14.77□□□□□ -0.05
SF3B6-201ENST00000233468 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
SF3B6-201ENST00000233468 SLC39A6Q13433 755 aa14.76□□□□□ -0.05
SF3B6-201ENST00000233468 FMNL2Q96PY5 1086 aa14.76□□□□□ -0.05
SF3B6-201ENST00000233468 BABAM1Q9NWV8 329 aa14.76□□□□□ -0.05
SF3B6-201ENST00000233468 KIF13BQ9NQT8 1826 aa14.76□□□□□ -0.05
SF3B6-201ENST00000233468 APAF1O14727 1248 aa14.75□□□□□ -0.05
SF3B6-201ENST00000233468 STARD3NLO95772 234 aa14.75□□□□□ -0.05
SF3B6-201ENST00000233468 RC3H1Q5TC82 1133 aaKnown RBP14.75□□□□□ -0.05
SF3B6-201ENST00000233468 RRP7AQ9Y3A4 280 aaKnown RBP14.75□□□□□ -0.05
SF3B6-201ENST00000233468 ADCY9O60503 1353 aa14.74□□□□□ -0.05
SF3B6-201ENST00000233468 MMP10P09238 476 aa14.74□□□□□ -0.05
SF3B6-201ENST00000233468 FAM9BQ8IZU0 186 aa14.74□□□□□ -0.05
SF3B6-201ENST00000233468 NGEFQ8N5V2 710 aa14.74□□□□□ -0.05
SF3B6-201ENST00000233468 GPBP1L1Q9HC44 474 aaPredicted RBP14.73□□□□□ -0.05
SF3B6-201ENST00000233468 RTCBQ9Y3I0 505 aaKnown RBP14.73□□□□□ -0.05
SF3B6-201ENST00000233468 ZNF831Q5JPB2 1677 aa14.73□□□□□ -0.05
SF3B6-201ENST00000233468 CICQ96RK0 1608 aaPredicted RBP14.73□□□□□ -0.05
SF3B6-201ENST00000233468 C4AP0C0L4 1744 aa14.72□□□□□ -0.05
SF3B6-201ENST00000233468 CNTNAP4Q9C0A0 1308 aa14.72□□□□□ -0.05
SF3B6-201ENST00000233468 ADAMTS7Q9UKP4 1686 aa14.72□□□□□ -0.05
SF3B6-201ENST00000233468 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
SF3B6-201ENST00000233468 ZNF496Q96IT1 587 aaPredicted RBP14.72□□□□□ -0.05
SF3B6-201ENST00000233468 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.05
SF3B6-201ENST00000233468 PXDNLA1KZ92 1463 aa14.71□□□□□ -0.05
SF3B6-201ENST00000233468 A0A0G2JLW4 131 aa14.71□□□□□ -0.05
SF3B6-201ENST00000233468 SNRPA1P09661 255 aaKnown RBP14.71□□□□□ -0.05
SF3B6-201ENST00000233468 TRAPPC3LQ5T215 181 aa14.71□□□□□ -0.05
SF3B6-201ENST00000233468 NPM2Q86SE8 214 aaKnown RBP14.71□□□□□ -0.05
SF3B6-201ENST00000233468 TSPYL4Q9UJ04 414 aa14.71□□□□□ -0.05
SF3B6-201ENST00000233468 TRIM35Q9UPQ4 493 aa14.71□□□□□ -0.05
SF3B6-201ENST00000233468 HEG1Q9ULI3 1381 aa14.71□□□□□ -0.06
SF3B6-201ENST00000233468 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
SF3B6-201ENST00000233468 BRCA1P38398 1863 aaKnown RBP14.7□□□□□ -0.06
SF3B6-201ENST00000233468 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
SF3B6-201ENST00000233468 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
SF3B6-201ENST00000233468 DNAJC10Q8IXB1 793 aa14.7□□□□□ -0.06
SF3B6-201ENST00000233468 THUMPD2Q9BTF0 503 aaKnown RBP14.7□□□□□ -0.06
SF3B6-201ENST00000233468 RPS6KA4O75676 772 aa14.69□□□□□ -0.06
SF3B6-201ENST00000233468 GYS1P13807 737 aa14.69□□□□□ -0.06
SF3B6-201ENST00000233468 CRKLP46109 303 aaKnown RBP14.69□□□□□ -0.06
SF3B6-201ENST00000233468 CCDC87Q9NVE4 849 aa14.69□□□□□ -0.06
SF3B6-201ENST00000233468 CYP19A1P11511 503 aaPredicted RBP14.68□□□□□ -0.06
SF3B6-201ENST00000233468 GNAI1P63096 354 aa14.68□□□□□ -0.06
SF3B6-201ENST00000233468 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
SF3B6-201ENST00000233468 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
SF3B6-201ENST00000233468 TJP1Q07157 1748 aa14.68□□□□□ -0.06
SF3B6-201ENST00000233468 KCNQ3O43525 872 aa14.67□□□□□ -0.06
SF3B6-201ENST00000233468 DPEP1P16444 411 aa14.67□□□□□ -0.06
SF3B6-201ENST00000233468 RFC4P35249 363 aa14.67□□□□□ -0.06
SF3B6-201ENST00000233468 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
SF3B6-201ENST00000233468 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
SF3B6-201ENST00000233468 BCS1LQ9Y276 419 aa14.67□□□□□ -0.06
SF3B6-201ENST00000233468 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
SF3B6-201ENST00000233468 C10orf71Q711Q0 1435 aa14.66□□□□□ -0.06
SF3B6-201ENST00000233468 A0A087WZG4 1122 aa14.66□□□□□ -0.06
SF3B6-201ENST00000233468 CHL1O00533 1208 aa14.66□□□□□ -0.06
SF3B6-201ENST00000233468 KIF3CO14782 793 aa14.66□□□□□ -0.06
SF3B6-201ENST00000233468 EIF4A1P60842 406 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms