RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 PXDNQ92626 1479 aa19.08■□□□□ 0.64
DDX1-201ENST00000233084 CDK12Q9NYV4 1490 aaPredicted RBP19.08■□□□□ 0.64
DDX1-201ENST00000233084 SMARCA5O60264 1052 aaPredicted RBP19.08■□□□□ 0.64
DDX1-201ENST00000233084 HCLS1P14317 486 aaPredicted RBP19.08■□□□□ 0.64
DDX1-201ENST00000233084 ELL2O00472 640 aaPredicted RBP19.07■□□□□ 0.64
DDX1-201ENST00000233084 INTS3Q68E01 1043 aaKnown RBP19.07■□□□□ 0.64
DDX1-201ENST00000233084 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
DDX1-201ENST00000233084 OTUD7AQ8TE49 926 aaPredicted RBP19.07■□□□□ 0.64
DDX1-201ENST00000233084 SPTLC3Q9NUV7 552 aa19.07■□□□□ 0.64
DDX1-201ENST00000233084 TTC22Q5TAA0 569 aa19.06■□□□□ 0.64
DDX1-201ENST00000233084 NEK4P51957 841 aa19.06■□□□□ 0.64
DDX1-201ENST00000233084 PYCARDQ9ULZ3 195 aa19.06■□□□□ 0.64
DDX1-201ENST00000233084 DIAPH3Q9NSV4 1193 aa19.05■□□□□ 0.64
DDX1-201ENST00000233084 LTN1O94822 1766 aa19.05■□□□□ 0.64
DDX1-201ENST00000233084 SPC24Q8NBT2 197 aa19.05■□□□□ 0.64
DDX1-201ENST00000233084 TMX3Q96JJ7 454 aa19.05■□□□□ 0.64
DDX1-201ENST00000233084 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
DDX1-201ENST00000233084 SOX12O15370 315 aa19.04■□□□□ 0.64
DDX1-201ENST00000233084 PDIA4P13667 645 aaKnown RBP19.04■□□□□ 0.64
DDX1-201ENST00000233084 ANKRD7Q92527 254 aa19.04■□□□□ 0.64
DDX1-201ENST00000233084 NHSL1Q5SYE7 1610 aa19.04■□□□□ 0.64
DDX1-201ENST00000233084 NFAT5O94916 1531 aa19.04■□□□□ 0.64
DDX1-201ENST00000233084 PHF14O94880 888 aa19.04■□□□□ 0.64
DDX1-201ENST00000233084 TAF3Q5VWG9 929 aa19.04■□□□□ 0.64
DDX1-201ENST00000233084 PLEKHF1Q96S99 279 aa19.03■□□□□ 0.64
DDX1-201ENST00000233084 SDSP20132 328 aa19.03■□□□□ 0.64
DDX1-201ENST00000233084 KCNJ4P48050 445 aa19.03■□□□□ 0.64
DDX1-201ENST00000233084 BRD1O95696 1058 aa19.02■□□□□ 0.64
DDX1-201ENST00000233084 USP48Q86UV5 1035 aa19.02■□□□□ 0.64
DDX1-201ENST00000233084 SLIT3O75094 1523 aa19.02■□□□□ 0.64
DDX1-201ENST00000233084 IPO4Q8TEX9 1081 aaKnown RBP19.02■□□□□ 0.64
DDX1-201ENST00000233084 SBNO1A3KN83 1393 aa19.02■□□□□ 0.63
DDX1-201ENST00000233084 ALDH1L2Q3SY69 923 aa19.02■□□□□ 0.63
DDX1-201ENST00000233084 CASC1Q6TDU7 716 aa19.02■□□□□ 0.63
DDX1-201ENST00000233084 FAM184AQ8NB25 1140 aa19.01■□□□□ 0.63
DDX1-201ENST00000233084 OGFRQ9NZT2 677 aa19.01■□□□□ 0.63
DDX1-201ENST00000233084 MAP3K19Q56UN5 1328 aa19.01■□□□□ 0.63
DDX1-201ENST00000233084 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
DDX1-201ENST00000233084 KIAA1524Q8TCG1 905 aa19.01■□□□□ 0.63
DDX1-201ENST00000233084 KCNF1Q9H3M0 494 aa19.01■□□□□ 0.63
DDX1-201ENST00000233084 ROBO1Q9Y6N7 1651 aa19■□□□□ 0.63
DDX1-201ENST00000233084 MED1Q15648 1581 aaPredicted RBP19■□□□□ 0.63
DDX1-201ENST00000233084 DIAPH1O60610 1272 aaKnown RBP19■□□□□ 0.63
DDX1-201ENST00000233084 NAA30Q147X3 362 aaPredicted RBP19■□□□□ 0.63
DDX1-201ENST00000233084 UVSSAQ2YD98 709 aa19■□□□□ 0.63
DDX1-201ENST00000233084 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
DDX1-201ENST00000233084 FEZ1Q99689 392 aa19■□□□□ 0.63
DDX1-201ENST00000233084 NCBP1Q09161 790 aaKnown RBP18.99■□□□□ 0.63
DDX1-201ENST00000233084 PHRF1Q9P1Y6 1649 aaKnown RBP18.99■□□□□ 0.63
DDX1-201ENST00000233084 KDM4AO75164 1064 aa18.98■□□□□ 0.63
DDX1-201ENST00000233084 IRX5P78411 483 aaPredicted RBP18.98■□□□□ 0.63
DDX1-201ENST00000233084 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
DDX1-201ENST00000233084 TSPYL6Q8N831 410 aa18.98■□□□□ 0.63
DDX1-201ENST00000233084 THUMPD2Q9BTF0 503 aaKnown RBP18.98■□□□□ 0.63
DDX1-201ENST00000233084 REC8O95072 547 aa18.97■□□□□ 0.63
DDX1-201ENST00000233084 IL13P35225 146 aa18.97■□□□□ 0.63
DDX1-201ENST00000233084 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
DDX1-201ENST00000233084 SOS2Q07890 1332 aaPredicted RBP18.97■□□□□ 0.63
DDX1-201ENST00000233084 RGPD1P0DJD0 1748 aa18.97■□□□□ 0.63
DDX1-201ENST00000233084 AP5Z1O43299 807 aa18.97■□□□□ 0.63
DDX1-201ENST00000233084 CTIFO43310 598 aaKnown RBP18.97■□□□□ 0.63
DDX1-201ENST00000233084 FLT4P35916 1363 aa18.96■□□□□ 0.63
DDX1-201ENST00000233084 SPATA31A3Q5VYP0 1347 aa18.96■□□□□ 0.63
DDX1-201ENST00000233084 CFAP44Q96MT7 982 aa18.96■□□□□ 0.63
DDX1-201ENST00000233084 IL16Q14005 1332 aa18.96■□□□□ 0.63
DDX1-201ENST00000233084 HSP90AB2PQ58FF8 381 aa18.96■□□□□ 0.63
DDX1-201ENST00000233084 MRPL50Q8N5N7 158 aaKnown RBP18.96■□□□□ 0.63
DDX1-201ENST00000233084 ERICH4A6NGS2 130 aa18.95■□□□□ 0.62
DDX1-201ENST00000233084 SLFN14P0C7P3 912 aa18.95■□□□□ 0.62
DDX1-201ENST00000233084 CTNNA3Q9UI47 895 aa18.95■□□□□ 0.62
DDX1-201ENST00000233084 CCDC183Q5T5S1 534 aa18.95■□□□□ 0.62
DDX1-201ENST00000233084 C16orf45Q96MC5 204 aaPredicted RBP18.95■□□□□ 0.62
DDX1-201ENST00000233084 ERC2O15083 957 aa18.94■□□□□ 0.62
DDX1-201ENST00000233084 GIMAP6Q6P9H5 292 aa18.94■□□□□ 0.62
DDX1-201ENST00000233084 KCNH5Q8NCM2 988 aa18.94■□□□□ 0.62
DDX1-201ENST00000233084 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
DDX1-201ENST00000233084 GCP02774 474 aa18.94■□□□□ 0.62
DDX1-201ENST00000233084 EIF4A2Q14240 407 aaKnown RBP18.94■□□□□ 0.62
DDX1-201ENST00000233084 DCTPP1Q9H773 170 aa18.94■□□□□ 0.62
DDX1-201ENST00000233084 CNPY2Q9Y2B0 182 aa18.94■□□□□ 0.62
DDX1-201ENST00000233084 VAMP4O75379 141 aa18.93■□□□□ 0.62
DDX1-201ENST00000233084 GABPB1Q06547 395 aaPredicted RBP18.93■□□□□ 0.62
DDX1-201ENST00000233084 HOXC9P31274 260 aa18.92■□□□□ 0.62
DDX1-201ENST00000233084 UPF3BQ9BZI7 483 aaKnown RBP18.92■□□□□ 0.62
DDX1-201ENST00000233084 AHDC1Q5TGY3 1603 aaPredicted RBP18.92■□□□□ 0.62
DDX1-201ENST00000233084 RTL1A6NKG5 1358 aa18.92■□□□□ 0.62
DDX1-201ENST00000233084 ARHGEF10O15013 1369 aa18.92■□□□□ 0.62
DDX1-201ENST00000233084 ABCA3Q99758 1704 aa18.92■□□□□ 0.62
DDX1-201ENST00000233084 MX1P20591 662 aa18.92■□□□□ 0.62
DDX1-201ENST00000233084 AMPHP49418 695 aa18.92■□□□□ 0.62
DDX1-201ENST00000233084 PALD1Q9ULE6 856 aa18.92■□□□□ 0.62
DDX1-201ENST00000233084 PTGS1P23219 599 aa18.91■□□□□ 0.62
DDX1-201ENST00000233084 TRERF1Q96PN7 1200 aa18.91■□□□□ 0.62
DDX1-201ENST00000233084 RGPD5Q99666 1765 aa18.91■□□□□ 0.62
DDX1-201ENST00000233084 DDX41Q9UJV9 622 aaKnown RBP18.91■□□□□ 0.62
DDX1-201ENST00000233084 CHMP4AQ9BY43 222 aa18.9■□□□□ 0.62
DDX1-201ENST00000233084 TCHHQ07283 1943 aa18.89■□□□□ 0.62
DDX1-201ENST00000233084 TSHZ3Q63HK5 1081 aa18.89■□□□□ 0.62
DDX1-201ENST00000233084 SRCIN1Q9C0H9 1055 aa18.89■□□□□ 0.62
DDX1-201ENST00000233084 IFT57Q9NWB7 429 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms