RNA–Protein interactions for RNA: ENST00000226524.3

PF4V1-201, Transcript of platelet factor 4 variant 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4V1, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1-201ENST00000226524 KIF13BQ9NQT8 1826 aa14.29□□□□□ -0.12
PF4V1-201ENST00000226524 PXDNLA1KZ92 1463 aa14.28□□□□□ -0.12
PF4V1-201ENST00000226524 CANXP27824 592 aaKnown RBP14.28□□□□□ -0.12
PF4V1-201ENST00000226524 IL6STP40189 918 aaPredicted RBP14.28□□□□□ -0.12
PF4V1-201ENST00000226524 FKBP8Q14318 412 aa14.28□□□□□ -0.12
PF4V1-201ENST00000226524 RALBP1Q15311 655 aa14.28□□□□□ -0.12
PF4V1-201ENST00000226524 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
PF4V1-201ENST00000226524 SRP68Q9UHB9 627 aaKnown RBP14.28□□□□□ -0.12
PF4V1-201ENST00000226524 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
PF4V1-201ENST00000226524 BCS1LQ9Y276 419 aa14.28□□□□□ -0.12
PF4V1-201ENST00000226524 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
PF4V1-201ENST00000226524 UBR2Q8IWV8 1755 aa14.27□□□□□ -0.12
PF4V1-201ENST00000226524 A0A0G2JLW4 131 aa14.27□□□□□ -0.13
PF4V1-201ENST00000226524 TM4SF1P30408 202 aa14.27□□□□□ -0.13
PF4V1-201ENST00000226524 PNISRQ8TF01 805 aaKnown RBP14.27□□□□□ -0.13
PF4V1-201ENST00000226524 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
PF4V1-201ENST00000226524 GPBP1L1Q9HC44 474 aaPredicted RBP14.27□□□□□ -0.13
PF4V1-201ENST00000226524 UTRNP46939 3433 aa14.27□□□□□ -0.13
PF4V1-201ENST00000226524 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
PF4V1-201ENST00000226524 DPEP1P16444 411 aa14.26□□□□□ -0.13
PF4V1-201ENST00000226524 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
PF4V1-201ENST00000226524 C1QTNF8P60827 252 aa14.26□□□□□ -0.13
PF4V1-201ENST00000226524 DALRD3Q5D0E6 543 aaKnown RBP14.26□□□□□ -0.13
PF4V1-201ENST00000226524 POLRMTO00411 1230 aaKnown RBP14.25□□□□□ -0.13
PF4V1-201ENST00000226524 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
PF4V1-201ENST00000226524 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
PF4V1-201ENST00000226524 ARHGAP27Q6ZUM4 889 aa14.24□□□□□ -0.13
PF4V1-201ENST00000226524 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
PF4V1-201ENST00000226524 NPHP1O15259 732 aa14.23□□□□□ -0.13
PF4V1-201ENST00000226524 SERPINB2P05120 415 aa14.23□□□□□ -0.13
PF4V1-201ENST00000226524 DDR1Q08345 913 aa14.23□□□□□ -0.13
PF4V1-201ENST00000226524 NFIXQ14938 502 aa14.23□□□□□ -0.13
PF4V1-201ENST00000226524 ZNF652Q9Y2D9 606 aa14.23□□□□□ -0.13
PF4V1-201ENST00000226524 ZNF330Q9Y3S2 320 aaPredicted RBP14.23□□□□□ -0.13
PF4V1-201ENST00000226524 SIPA1L3O60292 1781 aaPredicted RBP14.23□□□□□ -0.13
PF4V1-201ENST00000226524 RGL2O15211 777 aa14.22□□□□□ -0.13
PF4V1-201ENST00000226524 MCM10Q7L590 875 aa14.22□□□□□ -0.13
PF4V1-201ENST00000226524 WWC3Q9ULE0 1092 aa14.22□□□□□ -0.13
PF4V1-201ENST00000226524 H0YIN7 160 aa14.21□□□□□ -0.13
PF4V1-201ENST00000226524 PDE6BP35913 854 aa14.21□□□□□ -0.13
PF4V1-201ENST00000226524 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.13
PF4V1-201ENST00000226524 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.13
PF4V1-201ENST00000226524 SETDB2Q96T68 719 aa14.21□□□□□ -0.13
PF4V1-201ENST00000226524 GOLGB1Q14789 3259 aaKnown RBP14.21□□□□□ -0.13
PF4V1-201ENST00000226524 N4BP2Q86UW6 1770 aaPredicted RBP14.21□□□□□ -0.13
PF4V1-201ENST00000226524 ADCY9O60503 1353 aa14.21□□□□□ -0.14
PF4V1-201ENST00000226524 CARMIL3Q8ND23 1372 aa14.21□□□□□ -0.14
PF4V1-201ENST00000226524 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
PF4V1-201ENST00000226524 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
PF4V1-201ENST00000226524 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
PF4V1-201ENST00000226524 KCNA3P22001 575 aa14.19□□□□□ -0.14
PF4V1-201ENST00000226524 ST5P78524 1137 aa14.19□□□□□ -0.14
PF4V1-201ENST00000226524 TTLL6Q8N841 843 aa14.19□□□□□ -0.14
PF4V1-201ENST00000226524 TBC1D2BQ9UPU7 963 aa14.19□□□□□ -0.14
PF4V1-201ENST00000226524 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
PF4V1-201ENST00000226524 MYBBP1AQ9BQG0 1328 aaKnown RBP14.18□□□□□ -0.14
PF4V1-201ENST00000226524 A1BGP04217 495 aa14.18□□□□□ -0.14
PF4V1-201ENST00000226524 BICDL1Q6ZP65 573 aa14.18□□□□□ -0.14
PF4V1-201ENST00000226524 BRIP1Q9BX63 1249 aa14.18□□□□□ -0.14
PF4V1-201ENST00000226524 BCL2L12Q9HB09 334 aa14.18□□□□□ -0.14
PF4V1-201ENST00000226524 ARFGEF1Q9Y6D6 1849 aa14.18□□□□□ -0.14
PF4V1-201ENST00000226524 CHRNA5P30532 468 aa14.17□□□□□ -0.14
PF4V1-201ENST00000226524 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
PF4V1-201ENST00000226524 C2CD5Q86YS7 1000 aa14.17□□□□□ -0.14
PF4V1-201ENST00000226524 CNBD1Q8NA66 436 aa14.17□□□□□ -0.14
PF4V1-201ENST00000226524 PLEKHF1Q96S99 279 aa14.17□□□□□ -0.14
PF4V1-201ENST00000226524 BABAM1Q9NWV8 329 aa14.17□□□□□ -0.14
PF4V1-201ENST00000226524 USP16Q9Y5T5 823 aa14.17□□□□□ -0.14
PF4V1-201ENST00000226524 KDM2BQ8NHM5 1336 aa14.16□□□□□ -0.14
PF4V1-201ENST00000226524 ZC3H4Q9UPT8 1303 aaKnown RBP14.16□□□□□ -0.14
PF4V1-201ENST00000226524 BRCA1P38398 1863 aaKnown RBP14.16□□□□□ -0.14
PF4V1-201ENST00000226524 NRXN2Q9P2S2 1712 aa14.16□□□□□ -0.14
PF4V1-201ENST00000226524 KCNQ3O43525 872 aa14.16□□□□□ -0.14
PF4V1-201ENST00000226524 DCTN1Q14203 1278 aa14.16□□□□□ -0.14
PF4V1-201ENST00000226524 TBC1D9BQ66K14 1250 aa14.16□□□□□ -0.14
PF4V1-201ENST00000226524 ZNF526Q8TF50 670 aaPredicted RBP14.16□□□□□ -0.14
PF4V1-201ENST00000226524 SCN7AQ01118 1682 aa14.15□□□□□ -0.14
PF4V1-201ENST00000226524 CAMTA2O94983 1202 aa14.15□□□□□ -0.14
PF4V1-201ENST00000226524 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
PF4V1-201ENST00000226524 SOGA3Q5TF21 947 aa14.15□□□□□ -0.14
PF4V1-201ENST00000226524 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
PF4V1-201ENST00000226524 AFDNP55196 1824 aaKnown RBP14.14□□□□□ -0.15
PF4V1-201ENST00000226524 ZEB1P37275 1124 aaPredicted RBP14.14□□□□□ -0.15
PF4V1-201ENST00000226524 C9orf131Q5VYM1 1079 aa14.14□□□□□ -0.15
PF4V1-201ENST00000226524 NBPF5PQ86XG9 351 aaPredicted RBP14.14□□□□□ -0.15
PF4V1-201ENST00000226524 C16orf71Q8IYS4 520 aaPredicted RBP14.14□□□□□ -0.15
PF4V1-201ENST00000226524 CNKSR1Q969H4 720 aa14.14□□□□□ -0.15
PF4V1-201ENST00000226524 ERBB4Q15303 1308 aa14.14□□□□□ -0.15
PF4V1-201ENST00000226524 RIPK4P57078 832 aa14.13□□□□□ -0.15
PF4V1-201ENST00000226524 PRR5LQ6MZQ0 368 aa14.13□□□□□ -0.15
PF4V1-201ENST00000226524 KIF6Q6ZMV9 814 aa14.13□□□□□ -0.15
PF4V1-201ENST00000226524 ZNF622Q969S3 477 aaKnown RBP eCLIP14.13□□□□□ -0.15
PF4V1-201ENST00000226524 RNF181Q9P0P0 153 aa14.13□□□□□ -0.15
PF4V1-201ENST00000226524 ERVV-1B6SEH8 477 aa14.12□□□□□ -0.15
PF4V1-201ENST00000226524 LMNB1P20700 586 aa14.12□□□□□ -0.15
PF4V1-201ENST00000226524 GTF2E1P29083 439 aaPredicted RBP14.12□□□□□ -0.15
PF4V1-201ENST00000226524 STYK1Q6J9G0 422 aa14.12□□□□□ -0.15
PF4V1-201ENST00000226524 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
PF4V1-201ENST00000226524 TSPYL4Q9UJ04 414 aa14.12□□□□□ -0.15
PF4V1-201ENST00000226524 TOMM70O94826 608 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms