RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 CCDC24Q8N4L8 307 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 DNAAF2Q9NVR5 837 aaKnown RBP10.59□□□□□ -0.71
CCL1-201ENST00000225842 WBP1LQ9NX94 342 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 CHIC2Q9UKJ5 165 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 NOD1Q9Y239 953 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 TMEM94Q12767 1356 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 STRCP1A6NGW2 1772 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 SPATA31A6Q5VVP1 1343 aa10.58□□□□□ -0.71
CCL1-201ENST00000225842 CDC42BPBQ9Y5S2 1711 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 UNCXA6NJT0 531 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 KIF3BO15066 747 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 ANKRD13DQ6ZTN6 518 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 TRIM50Q86XT4 487 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 UNC93B1Q9H1C4 597 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 KDM5DQ9BY66 1539 aa10.58□□□□□ -0.72
CCL1-201ENST00000225842 ARHGAP35Q9NRY4 1499 aa10.57□□□□□ -0.72
CCL1-201ENST00000225842 OXLD1Q5BKU9 147 aa10.57□□□□□ -0.72
CCL1-201ENST00000225842 CCDC85AQ96PX6 553 aaPredicted RBP10.57□□□□□ -0.72
CCL1-201ENST00000225842 DOLKQ9UPQ8 538 aa10.57□□□□□ -0.72
CCL1-201ENST00000225842 SYCP2Q9BX26 1530 aa10.57□□□□□ -0.72
CCL1-201ENST00000225842 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
CCL1-201ENST00000225842 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
CCL1-201ENST00000225842 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
CCL1-201ENST00000225842 TLL1O43897 1013 aa10.56□□□□□ -0.72
CCL1-201ENST00000225842 PRMT3O60678 531 aa10.56□□□□□ -0.72
CCL1-201ENST00000225842 ATP1A2P50993 1020 aa10.56□□□□□ -0.72
CCL1-201ENST00000225842 PTCRAQ6ISU1 281 aaPredicted RBP10.56□□□□□ -0.72
CCL1-201ENST00000225842 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
CCL1-201ENST00000225842 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
CCL1-201ENST00000225842 ROBO1Q9Y6N7 1651 aa10.55□□□□□ -0.72
CCL1-201ENST00000225842 IGSF3O75054 1194 aa10.55□□□□□ -0.72
CCL1-201ENST00000225842 LTKP29376 864 aa10.55□□□□□ -0.72
CCL1-201ENST00000225842 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
CCL1-201ENST00000225842 DNAJC14Q6Y2X3 702 aaPredicted RBP10.55□□□□□ -0.72
CCL1-201ENST00000225842 BIN2Q9UBW5 565 aaPredicted RBP10.55□□□□□ -0.72
CCL1-201ENST00000225842 CFDP1Q9UEE9 299 aaPredicted RBP10.55□□□□□ -0.72
CCL1-201ENST00000225842 LRP6O75581 1613 aa10.55□□□□□ -0.72
CCL1-201ENST00000225842 DHX29Q7Z478 1369 aaKnown RBP10.54□□□□□ -0.72
CCL1-201ENST00000225842 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
CCL1-201ENST00000225842 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
CCL1-201ENST00000225842 KIAA1107Q9UPP5 1409 aa10.54□□□□□ -0.72
CCL1-201ENST00000225842 EID1Q9Y6B2 187 aa10.54□□□□□ -0.72
CCL1-201ENST00000225842 LRRC9Q6ZRR7 1453 aa10.54□□□□□ -0.72
CCL1-201ENST00000225842 SCAF11Q99590 1463 aaKnown RBP10.54□□□□□ -0.72
CCL1-201ENST00000225842 RBM47A0AV96 593 aaKnown RBP10.53□□□□□ -0.72
CCL1-201ENST00000225842 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
CCL1-201ENST00000225842 GTF2IP78347 998 aa10.53□□□□□ -0.72
CCL1-201ENST00000225842 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
CCL1-201ENST00000225842 LGR5O75473 907 aa10.52□□□□□ -0.73
CCL1-201ENST00000225842 DKK1O94907 266 aa10.52□□□□□ -0.73
CCL1-201ENST00000225842 KCNA6P17658 529 aa10.52□□□□□ -0.73
CCL1-201ENST00000225842 AFF2P51816 1311 aa10.52□□□□□ -0.73
CCL1-201ENST00000225842 MSH6P52701 1360 aa10.52□□□□□ -0.73
CCL1-201ENST00000225842 FGD6Q6ZV73 1430 aa10.51□□□□□ -0.73
CCL1-201ENST00000225842 PLEKHH2Q8IVE3 1493 aa10.51□□□□□ -0.73
CCL1-201ENST00000225842 ADH1BP00325 375 aa10.51□□□□□ -0.73
CCL1-201ENST00000225842 MARSP56192 900 aaKnown RBP10.51□□□□□ -0.73
CCL1-201ENST00000225842 RBM6P78332 1123 aaKnown RBP10.51□□□□□ -0.73
CCL1-201ENST00000225842 AGERQ15109 404 aa10.51□□□□□ -0.73
CCL1-201ENST00000225842 NOM1Q5C9Z4 860 aaKnown RBP10.51□□□□□ -0.73
CCL1-201ENST00000225842 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
CCL1-201ENST00000225842 RBM19Q9Y4C8 960 aaKnown RBP10.51□□□□□ -0.73
CCL1-201ENST00000225842 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
CCL1-201ENST00000225842 SETBP1Q9Y6X0 1596 aa10.51□□□□□ -0.73
CCL1-201ENST00000225842 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 ABL1P00519 1130 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 SEC13P55735 322 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 PSME1Q06323 249 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 LINC01559Q495D7 138 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 CCDC102BQ68D86 513 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 SIX5Q8N196 739 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 TPCN2Q8NHX9 752 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
CCL1-201ENST00000225842 ATAD2Q6PL18 1390 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 RGS12O14924 1447 aa10.5□□□□□ -0.73
CCL1-201ENST00000225842 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
CCL1-201ENST00000225842 SH3RF1Q7Z6J0 888 aa10.49□□□□□ -0.73
CCL1-201ENST00000225842 BAP1Q92560 729 aa10.49□□□□□ -0.73
CCL1-201ENST00000225842 FOXJ1Q92949 421 aa10.49□□□□□ -0.73
CCL1-201ENST00000225842 ZPR1O75312 459 aa10.48□□□□□ -0.73
CCL1-201ENST00000225842 ERCC3P19447 782 aa10.48□□□□□ -0.73
CCL1-201ENST00000225842 ERFEQ4G0M1 354 aa10.48□□□□□ -0.73
CCL1-201ENST00000225842 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
CCL1-201ENST00000225842 ANO2Q9NQ90 1003 aa10.48□□□□□ -0.73
CCL1-201ENST00000225842 CXXC1Q9P0U4 656 aaPredicted RBP10.48□□□□□ -0.73
CCL1-201ENST00000225842 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
CCL1-201ENST00000225842 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
CCL1-201ENST00000225842 LOC105371045A0A1W2PR82 267 aa10.47□□□□□ -0.73
CCL1-201ENST00000225842 ZNF211Q13398 564 aaPredicted RBP10.47□□□□□ -0.73
CCL1-201ENST00000225842 OCLNQ16625 522 aa10.47□□□□□ -0.73
CCL1-201ENST00000225842 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
CCL1-201ENST00000225842 SLC26A8Q96RN1 970 aa10.47□□□□□ -0.73
CCL1-201ENST00000225842 BCL2L13Q9BXK5 485 aa10.47□□□□□ -0.73
CCL1-201ENST00000225842 MAP3K1Q13233 1512 aa10.47□□□□□ -0.73
CCL1-201ENST00000225842 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.73
CCL1-201ENST00000225842 BPHLQ86WA6 291 aaPredicted RBP10.46□□□□□ -0.73
CCL1-201ENST00000225842 MRRFQ96E11 262 aaKnown RBP10.46□□□□□ -0.73
CCL1-201ENST00000225842 SLC10A4Q96EP9 437 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms