RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ZNF790Q6PG37 636 aa24■■□□□ 1.43
PFN1-201ENST00000225655 ZBTB1Q9Y2K1 713 aa24■■□□□ 1.43
PFN1-201ENST00000225655 ADCY9O60503 1353 aa24■■□□□ 1.43
PFN1-201ENST00000225655 COL15A1P39059 1388 aa24■■□□□ 1.43
PFN1-201ENST00000225655 ATP10DQ9P241 1426 aa24■■□□□ 1.43
PFN1-201ENST00000225655 RALBP1Q15311 655 aa23.99■■□□□ 1.43
PFN1-201ENST00000225655 USPL1Q5W0Q7 1092 aa23.99■■□□□ 1.43
PFN1-201ENST00000225655 ZNF496Q96IT1 587 aaPredicted RBP23.99■■□□□ 1.43
PFN1-201ENST00000225655 GIGYF1O75420 1035 aaPredicted RBP23.98■■□□□ 1.43
PFN1-201ENST00000225655 FCHSD2O94868 740 aa23.98■■□□□ 1.43
PFN1-201ENST00000225655 STARD3NLO95772 234 aa23.98■■□□□ 1.43
PFN1-201ENST00000225655 DPEP1P16444 411 aa23.98■■□□□ 1.43
PFN1-201ENST00000225655 TM4SF1P30408 202 aa23.98■■□□□ 1.43
PFN1-201ENST00000225655 C1QTNF8P60827 252 aa23.98■■□□□ 1.43
PFN1-201ENST00000225655 NARFQ9UHQ1 456 aa23.98■■□□□ 1.43
PFN1-201ENST00000225655 HEG1Q9ULI3 1381 aa23.97■■□□□ 1.43
PFN1-201ENST00000225655 POLRMTO00411 1230 aaKnown RBP23.96■■□□□ 1.43
PFN1-201ENST00000225655 TEX13AQ9BXU3 409 aaPredicted RBP23.96■■□□□ 1.43
PFN1-201ENST00000225655 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
PFN1-201ENST00000225655 KCNA3P22001 575 aa23.94■■□□□ 1.42
PFN1-201ENST00000225655 CANXP27824 592 aaKnown RBP23.94■■□□□ 1.42
PFN1-201ENST00000225655 FMNL2Q96PY5 1086 aa23.94■■□□□ 1.42
PFN1-201ENST00000225655 ARFGEF1Q9Y6D6 1849 aa23.94■■□□□ 1.42
PFN1-201ENST00000225655 EIF5P55010 431 aaKnown RBP23.93■■□□□ 1.42
PFN1-201ENST00000225655 AFDNP55196 1824 aaKnown RBP23.93■■□□□ 1.42
PFN1-201ENST00000225655 NRXN2Q9P2S2 1712 aa23.93■■□□□ 1.42
PFN1-201ENST00000225655 BTBD11A6QL63 1104 aa23.92■■□□□ 1.42
PFN1-201ENST00000225655 ANP32CO43423 234 aa23.92■■□□□ 1.42
PFN1-201ENST00000225655 NFIXQ14938 502 aa23.92■■□□□ 1.42
PFN1-201ENST00000225655 BCL2L12Q9HB09 334 aa23.92■■□□□ 1.42
PFN1-201ENST00000225655 A0A087WZG4 1122 aa23.91■■□□□ 1.42
PFN1-201ENST00000225655 RTF1Q92541 710 aaKnown RBP23.91■■□□□ 1.42
PFN1-201ENST00000225655 PIM2Q9P1W9 311 aa23.91■■□□□ 1.42
PFN1-201ENST00000225655 GPBP1L1Q9HC44 474 aaPredicted RBP23.9■■□□□ 1.42
PFN1-201ENST00000225655 HTATSF1O43719 755 aaKnown RBP23.89■■□□□ 1.41
PFN1-201ENST00000225655 MCM10Q7L590 875 aa23.89■■□□□ 1.41
PFN1-201ENST00000225655 SCN7AQ01118 1682 aa23.89■■□□□ 1.41
PFN1-201ENST00000225655 KCNQ3O43525 872 aa23.88■■□□□ 1.41
PFN1-201ENST00000225655 MYBBP1AQ9BQG0 1328 aaKnown RBP23.87■■□□□ 1.41
PFN1-201ENST00000225655 IL6STP40189 918 aaPredicted RBP23.87■■□□□ 1.41
PFN1-201ENST00000225655 ARHGAP27Q6ZUM4 889 aa23.87■■□□□ 1.41
PFN1-201ENST00000225655 PRKRIP1Q9H875 184 aaPredicted RBP23.87■■□□□ 1.41
PFN1-201ENST00000225655 CHRNA5P30532 468 aa23.86■■□□□ 1.41
PFN1-201ENST00000225655 DALRD3Q5D0E6 543 aaKnown RBP23.86■■□□□ 1.41
PFN1-201ENST00000225655 SERPINB2P05120 415 aa23.85■■□□□ 1.41
PFN1-201ENST00000225655 ZNF526Q8TF50 670 aaPredicted RBP23.85■■□□□ 1.41
PFN1-201ENST00000225655 DLEC1Q9Y238 1755 aa23.85■■□□□ 1.41
PFN1-201ENST00000225655 SENP3-EIF4A1A0A087X0R7 540 aa23.84■■□□□ 1.41
PFN1-201ENST00000225655 A1BGP04217 495 aa23.84■■□□□ 1.41
PFN1-201ENST00000225655 DLG5Q8TDM6 1919 aa23.84■■□□□ 1.41
PFN1-201ENST00000225655 NEFMP07197 916 aa23.83■■□□□ 1.41
PFN1-201ENST00000225655 DCTN1Q14203 1278 aa23.83■■□□□ 1.41
PFN1-201ENST00000225655 ZNF330Q9Y3S2 320 aaPredicted RBP23.83■■□□□ 1.41
PFN1-201ENST00000225655 SNRPA1P09661 255 aaKnown RBP23.82■■□□□ 1.4
PFN1-201ENST00000225655 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
PFN1-201ENST00000225655 TBC1D2BQ9UPU7 963 aa23.82■■□□□ 1.4
PFN1-201ENST00000225655 USP16Q9Y5T5 823 aa23.82■■□□□ 1.4
PFN1-201ENST00000225655 TBC1D9BQ66K14 1250 aa23.81■■□□□ 1.4
PFN1-201ENST00000225655 BICDL1Q6ZP65 573 aa23.81■■□□□ 1.4
PFN1-201ENST00000225655 PLEKHF1Q96S99 279 aa23.81■■□□□ 1.4
PFN1-201ENST00000225655 BCORQ6W2J9 1755 aa23.8■■□□□ 1.4
PFN1-201ENST00000225655 TAF7Q15545 349 aaPredicted RBP23.8■■□□□ 1.4
PFN1-201ENST00000225655 DIEXFQ68CQ4 756 aaKnown RBP23.79■■□□□ 1.4
PFN1-201ENST00000225655 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
PFN1-201ENST00000225655 PRAMEF22A3QJZ6 481 aa23.78■■□□□ 1.4
PFN1-201ENST00000225655 CAMTA2O94983 1202 aa23.78■■□□□ 1.4
PFN1-201ENST00000225655 PNNQ9H307 717 aaKnown RBP23.78■■□□□ 1.4
PFN1-201ENST00000225655 ANKRD31Q8N7Z5 1873 aa23.77■■□□□ 1.4
PFN1-201ENST00000225655 KDM3BQ7LBC6 1761 aa23.77■■□□□ 1.4
PFN1-201ENST00000225655 SBF1O95248 1867 aa23.77■■□□□ 1.4
PFN1-201ENST00000225655 NFE2L2Q16236 605 aa23.76■■□□□ 1.39
PFN1-201ENST00000225655 C9orf131Q5VYM1 1079 aa23.76■■□□□ 1.39
PFN1-201ENST00000225655 DZIP3Q86Y13 1208 aaKnown RBP23.76■■□□□ 1.39
PFN1-201ENST00000225655 C2CD5Q86YS7 1000 aa23.76■■□□□ 1.39
PFN1-201ENST00000225655 LAMB4A4D0S4 1761 aa23.75■■□□□ 1.39
PFN1-201ENST00000225655 H0YIN7 160 aa23.75■■□□□ 1.39
PFN1-201ENST00000225655 KIF3CO14782 793 aa23.75■■□□□ 1.39
PFN1-201ENST00000225655 SETDB2Q96T68 719 aa23.75■■□□□ 1.39
PFN1-201ENST00000225655 BRIP1Q9BX63 1249 aa23.75■■□□□ 1.39
PFN1-201ENST00000225655 PIP4K2AP48426 406 aaPredicted RBP23.74■■□□□ 1.39
PFN1-201ENST00000225655 PRR5LQ6MZQ0 368 aa23.74■■□□□ 1.39
PFN1-201ENST00000225655 TTLL6Q8N841 843 aa23.74■■□□□ 1.39
PFN1-201ENST00000225655 PNISRQ8TF01 805 aaKnown RBP23.74■■□□□ 1.39
PFN1-201ENST00000225655 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
PFN1-201ENST00000225655 MAPK8IP3Q9UPT6 1336 aa23.74■■□□□ 1.39
PFN1-201ENST00000225655 CLEC4GQ6UXB4 293 aa23.73■■□□□ 1.39
PFN1-201ENST00000225655 MIS18AQ9NYP9 233 aa23.73■■□□□ 1.39
PFN1-201ENST00000225655 NBPF26B4DH59 902 aa23.72■■□□□ 1.39
PFN1-201ENST00000225655 PDE6BP35913 854 aa23.72■■□□□ 1.39
PFN1-201ENST00000225655 NBPF10Q6P3W6 841 aaKnown RBP23.72■■□□□ 1.39
PFN1-201ENST00000225655 NBPF15Q8N660 670 aa23.72■■□□□ 1.39
PFN1-201ENST00000225655 COL11A2P13942 1736 aaPredicted RBP23.71■■□□□ 1.39
PFN1-201ENST00000225655 RGL2O15211 777 aa23.71■■□□□ 1.39
PFN1-201ENST00000225655 CNBD1Q8NA66 436 aa23.71■■□□□ 1.39
PFN1-201ENST00000225655 RNF181Q9P0P0 153 aa23.71■■□□□ 1.39
PFN1-201ENST00000225655 ZNF652Q9Y2D9 606 aa23.7■■□□□ 1.38
PFN1-201ENST00000225655 THUMPD2Q9BTF0 503 aaKnown RBP23.69■■□□□ 1.38
PFN1-201ENST00000225655 NPHP1O15259 732 aa23.67■■□□□ 1.38
PFN1-201ENST00000225655 EIF4A1P60842 406 aaKnown RBP23.67■■□□□ 1.38
PFN1-201ENST00000225655 ST5P78524 1137 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms