RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
PLOD3-201ENST00000223127 KDM6AO15550 1401 aaPredicted RBP16.11■□□□□ 0.17
PLOD3-201ENST00000223127 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
PLOD3-201ENST00000223127 EVA1CP58658 441 aa16.11■□□□□ 0.17
PLOD3-201ENST00000223127 RPAP2Q8IXW5 612 aaPredicted RBP16.11■□□□□ 0.17
PLOD3-201ENST00000223127 SLC52A2Q9HAB3 445 aa16.11■□□□□ 0.17
PLOD3-201ENST00000223127 WDR17Q8IZU2 1322 aa16.1■□□□□ 0.17
PLOD3-201ENST00000223127 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
PLOD3-201ENST00000223127 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
PLOD3-201ENST00000223127 PI4KAP2A4QPH2 592 aa16.1■□□□□ 0.17
PLOD3-201ENST00000223127 PI4KAP1Q8N8J0 262 aa16.1■□□□□ 0.17
PLOD3-201ENST00000223127 HOXB7P09629 217 aa16.09■□□□□ 0.17
PLOD3-201ENST00000223127 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
PLOD3-201ENST00000223127 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
PLOD3-201ENST00000223127 KIF2CQ99661 725 aa16.09■□□□□ 0.17
PLOD3-201ENST00000223127 DCTPP1Q9H773 170 aa16.09■□□□□ 0.17
PLOD3-201ENST00000223127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.09■□□□□ 0.17
PLOD3-201ENST00000223127 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
PLOD3-201ENST00000223127 CD2BP2O95400 341 aaKnown RBP16.09■□□□□ 0.17
PLOD3-201ENST00000223127 GNAI2P04899 355 aa16.09■□□□□ 0.17
PLOD3-201ENST00000223127 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.16
PLOD3-201ENST00000223127 TPM2P07951 284 aa16.08■□□□□ 0.16
PLOD3-201ENST00000223127 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
PLOD3-201ENST00000223127 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
PLOD3-201ENST00000223127 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
PLOD3-201ENST00000223127 DCAF5Q96JK2 942 aa16.08■□□□□ 0.16
PLOD3-201ENST00000223127 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
PLOD3-201ENST00000223127 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-201ENST00000223127 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
PLOD3-201ENST00000223127 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
PLOD3-201ENST00000223127 LRRFIP2Q9Y608 721 aaKnown RBP16.07■□□□□ 0.16
PLOD3-201ENST00000223127 AK9Q5TCS8 1911 aa16.06■□□□□ 0.16
PLOD3-201ENST00000223127 GNAI3P08754 354 aa16.06■□□□□ 0.16
PLOD3-201ENST00000223127 CABP4P57796 275 aa16.06■□□□□ 0.16
PLOD3-201ENST00000223127 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-201ENST00000223127 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
PLOD3-201ENST00000223127 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
PLOD3-201ENST00000223127 COL5A2P05997 1499 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-201ENST00000223127 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
PLOD3-201ENST00000223127 SRCIN1Q9C0H9 1055 aa16.06■□□□□ 0.16
PLOD3-201ENST00000223127 HMMRO75330 724 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 PTMSP20962 102 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 PIP4K2AP48426 406 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-201ENST00000223127 CCDC173Q0VFZ6 552 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
PLOD3-201ENST00000223127 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-201ENST00000223127 MYL6BP14649 208 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-201ENST00000223127 PPP1R9BQ96SB3 815 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
PLOD3-201ENST00000223127 SSFA2P28290 1259 aa16.04■□□□□ 0.16
PLOD3-201ENST00000223127 BMP2KLQ5H9B9 411 aa16.04■□□□□ 0.16
PLOD3-201ENST00000223127 MAP3K2Q9Y2U5 619 aa16.04■□□□□ 0.16
PLOD3-201ENST00000223127 K7ELQ4 463 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-201ENST00000223127 IL2RBP14784 551 aa16.04■□□□□ 0.16
PLOD3-201ENST00000223127 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
PLOD3-201ENST00000223127 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
PLOD3-201ENST00000223127 NASPP49321 788 aaPredicted RBP16.03■□□□□ 0.16
PLOD3-201ENST00000223127 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
PLOD3-201ENST00000223127 CARD10Q9BWT7 1032 aa16.03■□□□□ 0.16
PLOD3-201ENST00000223127 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
PLOD3-201ENST00000223127 ABCC6O95255 1503 aa16.02■□□□□ 0.16
PLOD3-201ENST00000223127 BEND3Q5T5X7 828 aa16.02■□□□□ 0.16
PLOD3-201ENST00000223127 ADCY9O60503 1353 aa16.02■□□□□ 0.16
PLOD3-201ENST00000223127 USP16Q9Y5T5 823 aa16.02■□□□□ 0.15
PLOD3-201ENST00000223127 PLEKHM2Q8IWE5 1019 aa16.01■□□□□ 0.15
PLOD3-201ENST00000223127 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
PLOD3-201ENST00000223127 PCDH11XQ9BZA7 1347 aa16.01■□□□□ 0.15
PLOD3-201ENST00000223127 PCDH11YQ9BZA8 1340 aa16.01■□□□□ 0.15
PLOD3-201ENST00000223127 ZSCAN30Q86W11 494 aa16.01■□□□□ 0.15
PLOD3-201ENST00000223127 CACNA1FO60840 1977 aa16.01■□□□□ 0.15
PLOD3-201ENST00000223127 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
PLOD3-201ENST00000223127 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
PLOD3-201ENST00000223127 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
PLOD3-201ENST00000223127 ATP8B2P98198 1209 aa16■□□□□ 0.15
PLOD3-201ENST00000223127 PDIA6Q15084 440 aa16■□□□□ 0.15
PLOD3-201ENST00000223127 KSR2Q6VAB6 950 aa16■□□□□ 0.15
PLOD3-201ENST00000223127 CLEC17AQ6ZS10 378 aa16■□□□□ 0.15
PLOD3-201ENST00000223127 TBC1D9Q6ZT07 1266 aa16■□□□□ 0.15
PLOD3-201ENST00000223127 NHSL1Q5SYE7 1610 aa16■□□□□ 0.15
PLOD3-201ENST00000223127 SCN11AQ9UI33 1791 aa15.99■□□□□ 0.15
PLOD3-201ENST00000223127 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
PLOD3-201ENST00000223127 FMNL2Q96PY5 1086 aa15.99■□□□□ 0.15
PLOD3-201ENST00000223127 SIPA1L3O60292 1781 aaPredicted RBP15.99■□□□□ 0.15
PLOD3-201ENST00000223127 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
PLOD3-201ENST00000223127 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
PLOD3-201ENST00000223127 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
PLOD3-201ENST00000223127 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
PLOD3-201ENST00000223127 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
PLOD3-201ENST00000223127 PTCD1O75127 700 aaKnown RBP15.98■□□□□ 0.15
PLOD3-201ENST00000223127 BAG4O95429 457 aaKnown RBP15.98■□□□□ 0.15
PLOD3-201ENST00000223127 ADAMTS2O95450 1211 aa15.98■□□□□ 0.15
PLOD3-201ENST00000223127 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
PLOD3-201ENST00000223127 PDCL3Q9H2J4 239 aa15.98■□□□□ 0.15
PLOD3-201ENST00000223127 C9orf78Q9NZ63 289 aaPredicted RBP15.98■□□□□ 0.15
PLOD3-201ENST00000223127 ABCA3Q99758 1704 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms