RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 SCN11AQ9UI33 1791 aa21.43■■□□□ 1.02
LIM2-201ENST00000221973 TRAPPC3LQ5T215 181 aa21.43■■□□□ 1.02
LIM2-201ENST00000221973 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
LIM2-201ENST00000221973 KIF13BQ9NQT8 1826 aa21.43■■□□□ 1.02
LIM2-201ENST00000221973 RPS6KA4O75676 772 aa21.42■■□□□ 1.02
LIM2-201ENST00000221973 CICQ96RK0 1608 aaPredicted RBP21.42■■□□□ 1.02
LIM2-201ENST00000221973 SLC52A2Q9HAB3 445 aa21.42■■□□□ 1.02
LIM2-201ENST00000221973 WWC3Q9ULE0 1092 aa21.42■■□□□ 1.02
LIM2-201ENST00000221973 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
LIM2-201ENST00000221973 TJP1Q07157 1748 aa21.41■■□□□ 1.02
LIM2-201ENST00000221973 PTCD1O75127 700 aaKnown RBP21.41■■□□□ 1.02
LIM2-201ENST00000221973 GYS1P13807 737 aa21.41■■□□□ 1.02
LIM2-201ENST00000221973 ADRA2BP18089 450 aa21.41■■□□□ 1.02
LIM2-201ENST00000221973 C4AP0C0L4 1744 aa21.41■■□□□ 1.02
LIM2-201ENST00000221973 ADCY9O60503 1353 aa21.4■■□□□ 1.02
LIM2-201ENST00000221973 LAS1LQ9Y4W2 734 aaKnown RBP21.4■■□□□ 1.02
LIM2-201ENST00000221973 CEP350Q5VT06 3117 aa21.4■■□□□ 1.02
LIM2-201ENST00000221973 PXDNLA1KZ92 1463 aa21.39■■□□□ 1.02
LIM2-201ENST00000221973 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
LIM2-201ENST00000221973 TAF7Q15545 349 aaPredicted RBP21.39■■□□□ 1.01
LIM2-201ENST00000221973 WDR63Q8IWG1 891 aa21.39■■□□□ 1.01
LIM2-201ENST00000221973 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
LIM2-201ENST00000221973 ADAMTS7Q9UKP4 1686 aa21.38■■□□□ 1.01
LIM2-201ENST00000221973 ZNF521Q96K83 1311 aa21.38■■□□□ 1.01
LIM2-201ENST00000221973 CRKLP46109 303 aaKnown RBP21.38■■□□□ 1.01
LIM2-201ENST00000221973 NLGN1Q8N2Q7 840 aa21.38■■□□□ 1.01
LIM2-201ENST00000221973 MRC1P22897 1456 aa21.38■■□□□ 1.01
LIM2-201ENST00000221973 C10orf71Q711Q0 1435 aa21.38■■□□□ 1.01
LIM2-201ENST00000221973 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
LIM2-201ENST00000221973 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
LIM2-201ENST00000221973 ZBED9Q6R2W3 1325 aa21.36■■□□□ 1.01
LIM2-201ENST00000221973 BTBD11A6QL63 1104 aa21.36■■□□□ 1.01
LIM2-201ENST00000221973 N4BP2Q86UW6 1770 aaPredicted RBP21.36■■□□□ 1.01
LIM2-201ENST00000221973 RFC4P35249 363 aa21.35■■□□□ 1.01
LIM2-201ENST00000221973 INTS5Q6P9B9 1019 aaKnown RBP21.35■■□□□ 1.01
LIM2-201ENST00000221973 VIRMAQ69YN4 1812 aaKnown RBP21.34■■□□□ 1.01
LIM2-201ENST00000221973 GOLGA2Q08379 1002 aa21.34■■□□□ 1.01
LIM2-201ENST00000221973 SLC39A6Q13433 755 aa21.34■■□□□ 1.01
LIM2-201ENST00000221973 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
LIM2-201ENST00000221973 SPINK5Q9NQ38 1064 aaPredicted RBP21.34■■□□□ 1.01
LIM2-201ENST00000221973 IFT57Q9NWB7 429 aa21.34■■□□□ 1.01
LIM2-201ENST00000221973 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
LIM2-201ENST00000221973 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
LIM2-201ENST00000221973 IL16Q14005 1332 aa21.33■■□□□ 1.01
LIM2-201ENST00000221973 TGFB2P61812 414 aa21.33■■□□□ 1.01
LIM2-201ENST00000221973 GNAI1P63096 354 aa21.33■■□□□ 1.01
LIM2-201ENST00000221973 KCPQ6ZWJ8 1503 aa21.33■■□□□ 1
LIM2-201ENST00000221973 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
LIM2-201ENST00000221973 A0A0G2JLW4 131 aa21.32■■□□□ 1
LIM2-201ENST00000221973 CHL1O00533 1208 aa21.32■■□□□ 1
LIM2-201ENST00000221973 ZNF853P0CG23 659 aa21.32■■□□□ 1
LIM2-201ENST00000221973 FKBP8Q14318 412 aa21.32■■□□□ 1
LIM2-201ENST00000221973 DNAJC10Q8IXB1 793 aa21.32■■□□□ 1
LIM2-201ENST00000221973 CDCA7LQ96GN5 454 aa21.32■■□□□ 1
LIM2-201ENST00000221973 KCNQ3O43525 872 aa21.31■■□□□ 1
LIM2-201ENST00000221973 MBIPQ9NS73 344 aa21.31■■□□□ 1
LIM2-201ENST00000221973 BRCA1P38398 1863 aaKnown RBP21.3■■□□□ 1
LIM2-201ENST00000221973 KCNA3P22001 575 aa21.3■■□□□ 1
LIM2-201ENST00000221973 DDR1Q08345 913 aa21.3■■□□□ 1
LIM2-201ENST00000221973 ZNF790Q6PG37 636 aa21.3■■□□□ 1
LIM2-201ENST00000221973 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
LIM2-201ENST00000221973 BABAM1Q9NWV8 329 aa21.3■■□□□ 1
LIM2-201ENST00000221973 CYP19A1P11511 503 aaPredicted RBP21.29■■□□□ 1
LIM2-201ENST00000221973 DPEP1P16444 411 aa21.29■■□□□ 1
LIM2-201ENST00000221973 TTC5Q8N0Z6 440 aa21.29■■□□□ 1
LIM2-201ENST00000221973 CCDC87Q9NVE4 849 aa21.29■■□□□ 1
LIM2-201ENST00000221973 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
LIM2-201ENST00000221973 E9PSI1 815 aa21.28■■□□□ 1
LIM2-201ENST00000221973 SLFN5Q08AF3 891 aa21.28■■□□□ 1
LIM2-201ENST00000221973 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
LIM2-201ENST00000221973 SOS1Q07889 1333 aaPredicted RBP21.28■■□□□ 1
LIM2-201ENST00000221973 TM4SF1P30408 202 aa21.27■■□□□ 1
LIM2-201ENST00000221973 UBR2Q8IWV8 1755 aa21.27■■□□□ 1
LIM2-201ENST00000221973 FANCIQ9NVI1 1328 aa21.27■□□□□ 0.99
LIM2-201ENST00000221973 SIPA1L3O60292 1781 aaPredicted RBP21.26■□□□□ 0.99
LIM2-201ENST00000221973 ZNF526Q8TF50 670 aaPredicted RBP21.26■□□□□ 0.99
LIM2-201ENST00000221973 GPBP1L1Q9HC44 474 aaPredicted RBP21.26■□□□□ 0.99
LIM2-201ENST00000221973 BCS1LQ9Y276 419 aa21.26■□□□□ 0.99
LIM2-201ENST00000221973 ZNF496Q96IT1 587 aaPredicted RBP21.25■□□□□ 0.99
LIM2-201ENST00000221973 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
LIM2-201ENST00000221973 EIF4A1P60842 406 aaKnown RBP21.24■□□□□ 0.99
LIM2-201ENST00000221973 KRT24Q2M2I5 525 aa21.23■□□□□ 0.99
LIM2-201ENST00000221973 USPL1Q5W0Q7 1092 aa21.23■□□□□ 0.99
LIM2-201ENST00000221973 VSIG10Q8N0Z9 540 aa21.23■□□□□ 0.99
LIM2-201ENST00000221973 FMNL2Q96PY5 1086 aa21.23■□□□□ 0.99
LIM2-201ENST00000221973 ZBTB1Q9Y2K1 713 aa21.23■□□□□ 0.99
LIM2-201ENST00000221973 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
LIM2-201ENST00000221973 TRMT2AQ8IZ69 625 aaKnown RBP21.22■□□□□ 0.99
LIM2-201ENST00000221973 BCL2L12Q9HB09 334 aa21.22■□□□□ 0.99
LIM2-201ENST00000221973 ARFGEF1Q9Y6D6 1849 aa21.21■□□□□ 0.99
LIM2-201ENST00000221973 COL15A1P39059 1388 aa21.21■□□□□ 0.99
LIM2-201ENST00000221973 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
LIM2-201ENST00000221973 KIF3CO14782 793 aa21.2■□□□□ 0.98
LIM2-201ENST00000221973 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
LIM2-201ENST00000221973 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
LIM2-201ENST00000221973 NARFQ9UHQ1 456 aa21.2■□□□□ 0.98
LIM2-201ENST00000221973 HEG1Q9ULI3 1381 aa21.2■□□□□ 0.98
LIM2-201ENST00000221973 NRXN2Q9P2S2 1712 aa21.19■□□□□ 0.98
LIM2-201ENST00000221973 KDM3BQ7LBC6 1761 aa21.19■□□□□ 0.98
LIM2-201ENST00000221973 ZPR1O75312 459 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms