RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.58
TGFB1-201ENST00000221930 NCAPD2Q15021 1401 aa18.64■□□□□ 0.58
TGFB1-201ENST00000221930 ALS2Q96Q42 1657 aa18.64■□□□□ 0.57
TGFB1-201ENST00000221930 CACNA1FO60840 1977 aa18.64■□□□□ 0.57
TGFB1-201ENST00000221930 LGR6Q9HBX8 967 aa18.64■□□□□ 0.57
TGFB1-201ENST00000221930 CWC22Q9HCG8 908 aaKnown RBP18.64■□□□□ 0.57
TGFB1-201ENST00000221930 CHMLP26374 656 aa18.63■□□□□ 0.57
TGFB1-201ENST00000221930 CAVIN1Q6NZI2 390 aaKnown RBP18.63■□□□□ 0.57
TGFB1-201ENST00000221930 LMBRD1Q9NUN5 540 aa18.63■□□□□ 0.57
TGFB1-201ENST00000221930 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
TGFB1-201ENST00000221930 PRPF40AO75400 957 aaKnown RBP18.62■□□□□ 0.57
TGFB1-201ENST00000221930 MAP4K4O95819 1239 aaPredicted RBP18.62■□□□□ 0.57
TGFB1-201ENST00000221930 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
TGFB1-201ENST00000221930 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
TGFB1-201ENST00000221930 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
TGFB1-201ENST00000221930 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
TGFB1-201ENST00000221930 ERBB4Q15303 1308 aa18.61■□□□□ 0.57
TGFB1-201ENST00000221930 ANXA1P04083 346 aa18.61■□□□□ 0.57
TGFB1-201ENST00000221930 IL25Q9H293 177 aa18.61■□□□□ 0.57
TGFB1-201ENST00000221930 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
TGFB1-201ENST00000221930 KCNQ3O43525 872 aa18.6■□□□□ 0.57
TGFB1-201ENST00000221930 SURF6O75683 361 aaKnown RBP18.6■□□□□ 0.57
TGFB1-201ENST00000221930 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
TGFB1-201ENST00000221930 NBPF7P0C2Y1 421 aaPredicted RBP18.6■□□□□ 0.57
TGFB1-201ENST00000221930 TRIM44Q96DX7 344 aaPredicted RBP18.6■□□□□ 0.57
TGFB1-201ENST00000221930 UPF3BQ9BZI7 483 aaKnown RBP18.6■□□□□ 0.57
TGFB1-201ENST00000221930 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
TGFB1-201ENST00000221930 IP6K1Q92551 441 aa18.59■□□□□ 0.57
TGFB1-201ENST00000221930 CHPF2Q9P2E5 772 aa18.59■□□□□ 0.57
TGFB1-201ENST00000221930 TPM2P07951 284 aa18.59■□□□□ 0.57
TGFB1-201ENST00000221930 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
TGFB1-201ENST00000221930 C19orf44Q9H6X5 657 aa18.59■□□□□ 0.57
TGFB1-201ENST00000221930 STAP2Q9UGK3 403 aa18.59■□□□□ 0.57
TGFB1-201ENST00000221930 N4BP2Q86UW6 1770 aaPredicted RBP18.59■□□□□ 0.57
TGFB1-201ENST00000221930 SSH3Q8TE77 659 aa18.59■□□□□ 0.57
TGFB1-201ENST00000221930 SRCIN1Q9C0H9 1055 aa18.59■□□□□ 0.57
TGFB1-201ENST00000221930 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.57
TGFB1-201ENST00000221930 ESPNB1AK53 854 aa18.58■□□□□ 0.56
TGFB1-201ENST00000221930 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
TGFB1-201ENST00000221930 ZSCAN23Q3MJ62 389 aa18.58■□□□□ 0.56
TGFB1-201ENST00000221930 LRRC59Q96AG4 307 aaKnown RBP18.58■□□□□ 0.56
TGFB1-201ENST00000221930 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.56
TGFB1-201ENST00000221930 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
TGFB1-201ENST00000221930 MCCP23508 829 aa18.58■□□□□ 0.56
TGFB1-201ENST00000221930 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
TGFB1-201ENST00000221930 RBM27Q9P2N5 1060 aaKnown RBP18.58■□□□□ 0.56
TGFB1-201ENST00000221930 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
TGFB1-201ENST00000221930 EIF4A1P60842 406 aaKnown RBP18.57■□□□□ 0.56
TGFB1-201ENST00000221930 GPT2Q8TD30 523 aa18.57■□□□□ 0.56
TGFB1-201ENST00000221930 PSME1Q06323 249 aa18.56■□□□□ 0.56
TGFB1-201ENST00000221930 MPRIPQ6WCQ1 1025 aa18.56■□□□□ 0.56
TGFB1-201ENST00000221930 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
TGFB1-201ENST00000221930 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
TGFB1-201ENST00000221930 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
TGFB1-201ENST00000221930 FOXD4L6Q3SYB3 417 aaPredicted RBP18.55■□□□□ 0.56
TGFB1-201ENST00000221930 FOXD4L3Q6VB84 417 aaPredicted RBP18.55■□□□□ 0.56
TGFB1-201ENST00000221930 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
TGFB1-201ENST00000221930 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
TGFB1-201ENST00000221930 TEFQ10587 303 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
TGFB1-201ENST00000221930 DNAAF4Q8WXU2 420 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 BTBD11A6QL63 1104 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 ZNF445P59923 1031 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 POLA2Q14181 598 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 BEND3Q5T5X7 828 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 PRIM1P49642 420 aaKnown RBP18.53■□□□□ 0.56
TGFB1-201ENST00000221930 ANAPC15P60006 121 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
TGFB1-201ENST00000221930 PI4K2BQ8TCG2 481 aa18.53■□□□□ 0.56
TGFB1-201ENST00000221930 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
TGFB1-201ENST00000221930 MCM2P49736 904 aa18.52■□□□□ 0.56
TGFB1-201ENST00000221930 ADAMTS7Q9UKP4 1686 aa18.52■□□□□ 0.56
TGFB1-201ENST00000221930 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.56
TGFB1-201ENST00000221930 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.55
TGFB1-201ENST00000221930 RAB11FIP3O75154 756 aa18.51■□□□□ 0.55
TGFB1-201ENST00000221930 CUL4AQ13619 759 aa18.51■□□□□ 0.55
TGFB1-201ENST00000221930 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
TGFB1-201ENST00000221930 ANP32BQ92688 251 aaKnown RBP18.51■□□□□ 0.55
TGFB1-201ENST00000221930 RBSNQ9H1K0 784 aa18.51■□□□□ 0.55
TGFB1-201ENST00000221930 TMEM63CQ9P1W3 806 aa18.51■□□□□ 0.55
TGFB1-201ENST00000221930 CCDC173Q0VFZ6 552 aa18.5■□□□□ 0.55
TGFB1-201ENST00000221930 LMOD2Q6P5Q4 547 aa18.5■□□□□ 0.55
TGFB1-201ENST00000221930 BBXQ8WY36 941 aaPredicted RBP18.5■□□□□ 0.55
TGFB1-201ENST00000221930 KIF1BPQ96EK5 621 aa18.5■□□□□ 0.55
TGFB1-201ENST00000221930 XIRP1Q702N8 1843 aaKnown RBP18.5■□□□□ 0.55
TGFB1-201ENST00000221930 BRD1O95696 1058 aa18.5■□□□□ 0.55
TGFB1-201ENST00000221930 LARP6Q9BRS8 491 aaKnown RBP18.5■□□□□ 0.55
TGFB1-201ENST00000221930 AOX1Q06278 1338 aa18.49■□□□□ 0.55
TGFB1-201ENST00000221930 SYCE3A1L190 88 aa18.49■□□□□ 0.55
TGFB1-201ENST00000221930 PRAMEF22A3QJZ6 481 aa18.49■□□□□ 0.55
TGFB1-201ENST00000221930 HSPA4P34932 840 aa18.49■□□□□ 0.55
TGFB1-201ENST00000221930 OS9Q13438 667 aaPredicted RBP18.49■□□□□ 0.55
TGFB1-201ENST00000221930 CWC27Q6UX04 472 aaKnown RBP18.49■□□□□ 0.55
TGFB1-201ENST00000221930 ARHGEF25Q86VW2 580 aa18.49■□□□□ 0.55
TGFB1-201ENST00000221930 NAP1L2Q9ULW6 460 aaPredicted RBP18.49■□□□□ 0.55
TGFB1-201ENST00000221930 PROSER3Q2NL68 480 aa18.48■□□□□ 0.55
TGFB1-201ENST00000221930 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
TGFB1-201ENST00000221930 ADCY9O60503 1353 aa18.48■□□□□ 0.55
TGFB1-201ENST00000221930 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms