RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 HSPA4P34932 840 aa22.39■■□□□ 1.17
CACTIN-201ENST00000221899 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.17
CACTIN-201ENST00000221899 USHBP1Q8N6Y0 703 aa22.38■■□□□ 1.17
CACTIN-201ENST00000221899 PTPRUQ92729 1446 aa22.38■■□□□ 1.17
CACTIN-201ENST00000221899 EIF2S2P20042 333 aaKnown RBP22.38■■□□□ 1.17
CACTIN-201ENST00000221899 PLPPR3Q6T4P5 718 aa22.38■■□□□ 1.17
CACTIN-201ENST00000221899 SYAP1Q96A49 352 aaPredicted RBP22.38■■□□□ 1.17
CACTIN-201ENST00000221899 WDR33Q9C0J8 1336 aaKnown RBP22.37■■□□□ 1.17
CACTIN-201ENST00000221899 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
CACTIN-201ENST00000221899 SSH3Q8TE77 659 aa22.37■■□□□ 1.17
CACTIN-201ENST00000221899 TAF7Q15545 349 aaPredicted RBP22.36■■□□□ 1.17
CACTIN-201ENST00000221899 FAM13BQ9NYF5 915 aa22.36■■□□□ 1.17
CACTIN-201ENST00000221899 SRGAP3O43295 1099 aa22.36■■□□□ 1.17
CACTIN-201ENST00000221899 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
CACTIN-201ENST00000221899 CNPY2Q9Y2B0 182 aa22.36■■□□□ 1.17
CACTIN-201ENST00000221899 UQCRHLA0A096LP55 91 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 HTATSF1O43719 755 aaKnown RBP22.35■■□□□ 1.17
CACTIN-201ENST00000221899 UQCRHP07919 91 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 PI4K2BQ8TCG2 481 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 RPAP1Q9BWH6 1393 aaPredicted RBP22.35■■□□□ 1.17
CACTIN-201ENST00000221899 UBR1Q8IWV7 1749 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 CPA1P15085 419 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 HOXC9P31274 260 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 SNX14Q9Y5W7 946 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
CACTIN-201ENST00000221899 NBPF7P0C2Y1 421 aaPredicted RBP22.34■■□□□ 1.17
CACTIN-201ENST00000221899 CWC27Q6UX04 472 aaKnown RBP22.34■■□□□ 1.17
CACTIN-201ENST00000221899 RASEFQ8IZ41 740 aa22.34■■□□□ 1.17
CACTIN-201ENST00000221899 PDCL3Q9H2J4 239 aa22.34■■□□□ 1.17
CACTIN-201ENST00000221899 AK2P54819 239 aa22.34■■□□□ 1.17
CACTIN-201ENST00000221899 SPG7Q9UQ90 795 aa22.34■■□□□ 1.17
CACTIN-201ENST00000221899 AOX1Q06278 1338 aa22.34■■□□□ 1.17
CACTIN-201ENST00000221899 SGSM2O43147 1006 aa22.33■■□□□ 1.17
CACTIN-201ENST00000221899 RAD50Q92878 1312 aa22.33■■□□□ 1.17
CACTIN-201ENST00000221899 TCHHQ07283 1943 aa22.33■■□□□ 1.17
CACTIN-201ENST00000221899 CEBPAP49715 358 aaPredicted RBP22.33■■□□□ 1.16
CACTIN-201ENST00000221899 IL17RAQ96F46 866 aa22.32■■□□□ 1.16
CACTIN-201ENST00000221899 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.32■■□□□ 1.16
CACTIN-201ENST00000221899 PLEKHG1Q9ULL1 1385 aa22.32■■□□□ 1.16
CACTIN-201ENST00000221899 ANXA1P04083 346 aa22.32■■□□□ 1.16
CACTIN-201ENST00000221899 TERF1P54274 439 aa22.32■■□□□ 1.16
CACTIN-201ENST00000221899 RAB11FIP3O75154 756 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 PHF14O94880 888 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 MCM5P33992 734 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 ZNF830Q96NB3 372 aaPredicted RBP22.31■■□□□ 1.16
CACTIN-201ENST00000221899 LSG1Q9H089 658 aaKnown RBP22.31■■□□□ 1.16
CACTIN-201ENST00000221899 LRRC37A3O60309 1634 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 RGPD8O14715 1765 aaPredicted RBP22.31■■□□□ 1.16
CACTIN-201ENST00000221899 POLA2Q14181 598 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 RUFY3Q7L099 469 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 C14orf37Q86TY3 774 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 USP25Q9UHP3 1055 aa22.31■■□□□ 1.16
CACTIN-201ENST00000221899 ZMYND15Q9H091 742 aa22.3■■□□□ 1.16
CACTIN-201ENST00000221899 CSPP1Q1MSJ5 1256 aa22.3■■□□□ 1.16
CACTIN-201ENST00000221899 CNTROBQ8N137 903 aa22.3■■□□□ 1.16
CACTIN-201ENST00000221899 FIBPO43427 364 aa22.29■■□□□ 1.16
CACTIN-201ENST00000221899 KIF1BPQ96EK5 621 aa22.29■■□□□ 1.16
CACTIN-201ENST00000221899 TTC14Q96N46 770 aa22.29■■□□□ 1.16
CACTIN-201ENST00000221899 PIK3C2AO00443 1686 aa22.29■■□□□ 1.16
CACTIN-201ENST00000221899 ZSCAN22P10073 491 aaPredicted RBP22.29■■□□□ 1.16
CACTIN-201ENST00000221899 SYT1P21579 422 aa22.29■■□□□ 1.16
CACTIN-201ENST00000221899 OS9Q13438 667 aaPredicted RBP22.29■■□□□ 1.16
CACTIN-201ENST00000221899 CHPF2Q9P2E5 772 aa22.29■■□□□ 1.16
CACTIN-201ENST00000221899 PLEKHG5O94827 1062 aa22.28■■□□□ 1.16
CACTIN-201ENST00000221899 LARGE1O95461 756 aa22.28■■□□□ 1.16
CACTIN-201ENST00000221899 DDX54Q8TDD1 881 aaKnown RBP22.28■■□□□ 1.16
CACTIN-201ENST00000221899 ARID3AQ99856 593 aa22.28■■□□□ 1.16
CACTIN-201ENST00000221899 PI4KAP2A4QPH2 592 aa22.28■■□□□ 1.16
CACTIN-201ENST00000221899 STX6O43752 255 aa22.28■■□□□ 1.16
CACTIN-201ENST00000221899 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
CACTIN-201ENST00000221899 CASTP20810 708 aaKnown RBP22.28■■□□□ 1.16
CACTIN-201ENST00000221899 PI4KAP1Q8N8J0 262 aa22.28■■□□□ 1.16
CACTIN-201ENST00000221899 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
CACTIN-201ENST00000221899 ABTB2Q8N961 1025 aa22.27■■□□□ 1.16
CACTIN-201ENST00000221899 LIMCH1Q9UPQ0 1083 aa22.27■■□□□ 1.16
CACTIN-201ENST00000221899 SMC3Q9UQE7 1217 aa22.27■■□□□ 1.16
CACTIN-201ENST00000221899 KCNQ3O43525 872 aa22.27■■□□□ 1.15
CACTIN-201ENST00000221899 CCDC183Q5T5S1 534 aa22.27■■□□□ 1.15
CACTIN-201ENST00000221899 LGR6Q9HBX8 967 aa22.27■■□□□ 1.15
CACTIN-201ENST00000221899 EID1Q9Y6B2 187 aa22.27■■□□□ 1.15
CACTIN-201ENST00000221899 KIAA2012Q0VF49 1180 aa22.26■■□□□ 1.15
CACTIN-201ENST00000221899 CCDC83Q8IWF9 413 aa22.26■■□□□ 1.15
CACTIN-201ENST00000221899 NWD1Q149M9 1564 aa22.25■■□□□ 1.15
CACTIN-201ENST00000221899 BEND3Q5T5X7 828 aa22.25■■□□□ 1.15
CACTIN-201ENST00000221899 DNAAF4Q8WXU2 420 aa22.25■■□□□ 1.15
CACTIN-201ENST00000221899 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
CACTIN-201ENST00000221899 EPB41L2O43491 1005 aaKnown RBP22.24■■□□□ 1.15
CACTIN-201ENST00000221899 F13A1P00488 732 aa22.24■■□□□ 1.15
CACTIN-201ENST00000221899 PLCB2Q00722 1185 aa22.24■■□□□ 1.15
CACTIN-201ENST00000221899 PTH1RQ03431 593 aa22.24■■□□□ 1.15
CACTIN-201ENST00000221899 ADCK5Q3MIX3 580 aa22.24■■□□□ 1.15
CACTIN-201ENST00000221899 DNTTIP2Q5QJE6 756 aaKnown RBP22.24■■□□□ 1.15
CACTIN-201ENST00000221899 TMEM87AQ8NBN3 555 aa22.24■■□□□ 1.15
CACTIN-201ENST00000221899 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
CACTIN-201ENST00000221899 ADCY5O95622 1261 aa22.24■■□□□ 1.15
CACTIN-201ENST00000221899 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.24■■□□□ 1.15
CACTIN-201ENST00000221899 SASS6Q6UVJ0 657 aa22.23■■□□□ 1.15
CACTIN-201ENST00000221899 C17orf53Q8N3J3 647 aaPredicted RBP22.23■■□□□ 1.15
CACTIN-201ENST00000221899 CACNA1FO60840 1977 aa22.23■■□□□ 1.15
CACTIN-201ENST00000221899 EIF4A1P60842 406 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms