RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 FERMT3Q86UX7 667 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
NEFM-201ENST00000221166 RUFY2Q8WXA3 655 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 IL25Q9H293 177 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 RGS12O14924 1447 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 INTS4Q96HW7 963 aaKnown RBP13.43□□□□□ -0.26
NEFM-201ENST00000221166 SIL1Q9H173 461 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 PREX1Q8TCU6 1659 aa13.43□□□□□ -0.26
NEFM-201ENST00000221166 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 SPC24Q8NBT2 197 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 DNAAF4Q8WXU2 420 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 LIMCH1Q9UPQ0 1083 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 SOS1Q07889 1333 aaPredicted RBP13.42□□□□□ -0.26
NEFM-201ENST00000221166 STX6O43752 255 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 RAB11FIP3O75154 756 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
NEFM-201ENST00000221166 DRC7Q8IY82 874 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 PA2G4Q9UQ80 394 aaKnown RBP13.42□□□□□ -0.26
NEFM-201ENST00000221166 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 NECAB1Q8N987 351 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 ZMYND15Q9H091 742 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 CUL4AQ13619 759 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 HS1BP3Q53T59 392 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 LGR6Q9HBX8 967 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
NEFM-201ENST00000221166 SNX14Q9Y5W7 946 aa13.42□□□□□ -0.26
NEFM-201ENST00000221166 CRB1P82279 1406 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 FGD1P98174 961 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 ZNF530Q6P9A1 599 aaPredicted RBP13.41□□□□□ -0.26
NEFM-201ENST00000221166 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
NEFM-201ENST00000221166 ZSCAN22P10073 491 aaPredicted RBP13.41□□□□□ -0.26
NEFM-201ENST00000221166 HOXC9P31274 260 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 AACSQ86V21 672 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 PDCL3Q9H2J4 239 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 BTBD11A6QL63 1104 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 KCNQ3O43525 872 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 ADCY5O95622 1261 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 SYT1P21579 422 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 STK3Q13188 491 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 C17orf53Q8N3J3 647 aaPredicted RBP13.41□□□□□ -0.26
NEFM-201ENST00000221166 CYP46A1Q9Y6A2 500 aa13.41□□□□□ -0.26
NEFM-201ENST00000221166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.41□□□□□ -0.26
NEFM-201ENST00000221166 GJB2P29033 226 aa13.4□□□□□ -0.26
NEFM-201ENST00000221166 HSPA4P34932 840 aa13.4□□□□□ -0.26
NEFM-201ENST00000221166 SIRT1Q96EB6 747 aa13.4□□□□□ -0.26
NEFM-201ENST00000221166 CCDC8Q9H0W5 538 aaPredicted RBP13.4□□□□□ -0.26
NEFM-201ENST00000221166 G3BP1Q13283 466 aaKnown RBP eCLIP13.4□□□□□ -0.26
NEFM-201ENST00000221166 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
NEFM-201ENST00000221166 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
NEFM-201ENST00000221166 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
NEFM-201ENST00000221166 SGSM2O43147 1006 aa13.4□□□□□ -0.26
NEFM-201ENST00000221166 DNM1Q05193 864 aaKnown RBP13.4□□□□□ -0.26
NEFM-201ENST00000221166 PSME1Q06323 249 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 CAMK4Q16566 473 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 USP6P35125 1406 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 GLRX3O76003 335 aaKnown RBP13.39□□□□□ -0.27
NEFM-201ENST00000221166 FOSBP53539 338 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 SSH3Q8TE77 659 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 CDC42BPGQ6DT37 1551 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 ARHGEF10O15013 1369 aa13.39□□□□□ -0.27
NEFM-201ENST00000221166 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
NEFM-201ENST00000221166 PDLIM2Q96JY6 352 aa13.38□□□□□ -0.27
NEFM-201ENST00000221166 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
NEFM-201ENST00000221166 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
NEFM-201ENST00000221166 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
NEFM-201ENST00000221166 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
NEFM-201ENST00000221166 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
NEFM-201ENST00000221166 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
NEFM-201ENST00000221166 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
NEFM-201ENST00000221166 MAP3K2Q9Y2U5 619 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 ANKRD26Q9UPS8 1709 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
NEFM-201ENST00000221166 F13A1P00488 732 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
NEFM-201ENST00000221166 CWF19L2Q2TBE0 894 aaKnown RBP13.37□□□□□ -0.27
NEFM-201ENST00000221166 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 RUFY3Q7L099 469 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 TSC1Q92574 1164 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 DLC1Q96QB1 1528 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 RAD50Q92878 1312 aa13.37□□□□□ -0.27
NEFM-201ENST00000221166 UBE2HP62256 183 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 PTH1RQ03431 593 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 TFIP11Q9UBB9 837 aaKnown RBP13.36□□□□□ -0.27
NEFM-201ENST00000221166 MCM5P33992 734 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 ESCO1Q5FWF5 840 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 FAM184AQ8NB25 1140 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms