RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 NFIXQ14938 502 aa21.37■■□□□ 1.01
NME3-201ENST00000219302 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
NME3-201ENST00000219302 BCL2L12Q9HB09 334 aa21.37■■□□□ 1.01
NME3-201ENST00000219302 KCPQ6ZWJ8 1503 aa21.36■■□□□ 1.01
NME3-201ENST00000219302 APLP1P51693 650 aa21.36■■□□□ 1.01
NME3-201ENST00000219302 ZBTB1Q9Y2K1 713 aa21.36■■□□□ 1.01
NME3-201ENST00000219302 CC2D1BQ5T0F9 858 aaKnown RBP21.35■■□□□ 1.01
NME3-201ENST00000219302 DNAJC5GQ8N7S2 189 aa21.35■■□□□ 1.01
NME3-201ENST00000219302 COL15A1P39059 1388 aa21.33■■□□□ 1
NME3-201ENST00000219302 RBM46Q8TBY0 533 aaKnown RBP21.32■■□□□ 1
NME3-201ENST00000219302 RNF181Q9P0P0 153 aa21.32■■□□□ 1
NME3-201ENST00000219302 SERPINB2P05120 415 aa21.31■■□□□ 1
NME3-201ENST00000219302 EIF5P55010 431 aaKnown RBP21.31■■□□□ 1
NME3-201ENST00000219302 IL17REQ8NFR9 667 aa21.31■■□□□ 1
NME3-201ENST00000219302 VIRMAQ69YN4 1812 aaKnown RBP21.3■■□□□ 1
NME3-201ENST00000219302 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
NME3-201ENST00000219302 NPC1L1Q9UHC9 1359 aa21.3■■□□□ 1
NME3-201ENST00000219302 SBF1O95248 1867 aa21.29■■□□□ 1
NME3-201ENST00000219302 AFDNP55196 1824 aaKnown RBP21.29■■□□□ 1
NME3-201ENST00000219302 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
NME3-201ENST00000219302 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
NME3-201ENST00000219302 COL3A1P02461 1466 aaPredicted RBP21.28■■□□□ 1
NME3-201ENST00000219302 STARD3NLO95772 234 aa21.28■■□□□ 1
NME3-201ENST00000219302 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
NME3-201ENST00000219302 RRAGCQ9HB90 399 aa21.28■■□□□ 1
NME3-201ENST00000219302 PRELPP51888 382 aa21.27■■□□□ 1
NME3-201ENST00000219302 UBR2Q8IWV8 1755 aa21.27■■□□□ 1
NME3-201ENST00000219302 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
NME3-201ENST00000219302 RASSF7Q02833 373 aa21.26■□□□□ 0.99
NME3-201ENST00000219302 FSTL1Q12841 308 aa21.26■□□□□ 0.99
NME3-201ENST00000219302 ZNF790Q6PG37 636 aa21.26■□□□□ 0.99
NME3-201ENST00000219302 C16orf71Q8IYS4 520 aaPredicted RBP21.26■□□□□ 0.99
NME3-201ENST00000219302 TTC5Q8N0Z6 440 aa21.26■□□□□ 0.99
NME3-201ENST00000219302 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
NME3-201ENST00000219302 TTLL6Q8N841 843 aa21.25■□□□□ 0.99
NME3-201ENST00000219302 GAS2L2Q8NHY3 880 aa21.25■□□□□ 0.99
NME3-201ENST00000219302 HEG1Q9ULI3 1381 aa21.24■□□□□ 0.99
NME3-201ENST00000219302 A0A087WZG4 1122 aa21.24■□□□□ 0.99
NME3-201ENST00000219302 TEFQ10587 303 aa21.24■□□□□ 0.99
NME3-201ENST00000219302 BICDL1Q6ZP65 573 aa21.24■□□□□ 0.99
NME3-201ENST00000219302 C2CD5Q86YS7 1000 aa21.24■□□□□ 0.99
NME3-201ENST00000219302 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
NME3-201ENST00000219302 ZC3H4Q9UPT8 1303 aaKnown RBP21.24■□□□□ 0.99
NME3-201ENST00000219302 CARMIL3Q8ND23 1372 aa21.23■□□□□ 0.99
NME3-201ENST00000219302 LMNB1P20700 586 aa21.23■□□□□ 0.99
NME3-201ENST00000219302 TBC1D9BQ66K14 1250 aa21.23■□□□□ 0.99
NME3-201ENST00000219302 H0YIN7 160 aa21.22■□□□□ 0.99
NME3-201ENST00000219302 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
NME3-201ENST00000219302 PHACTR3Q96KR7 559 aa21.22■□□□□ 0.99
NME3-201ENST00000219302 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
NME3-201ENST00000219302 HTRA3P83110 453 aa21.21■□□□□ 0.99
NME3-201ENST00000219302 TBC1D2BQ9UPU7 963 aa21.21■□□□□ 0.99
NME3-201ENST00000219302 CEMIPQ8WUJ3 1361 aa21.21■□□□□ 0.99
NME3-201ENST00000219302 GLTPD2A6NH11 291 aa21.2■□□□□ 0.98
NME3-201ENST00000219302 NFKBIEO00221 500 aa21.2■□□□□ 0.98
NME3-201ENST00000219302 A1BGP04217 495 aa21.2■□□□□ 0.98
NME3-201ENST00000219302 BRIP1Q9BX63 1249 aa21.2■□□□□ 0.98
NME3-201ENST00000219302 DLEC1Q9Y238 1755 aa21.2■□□□□ 0.98
NME3-201ENST00000219302 KCNQ3O43525 872 aa21.19■□□□□ 0.98
NME3-201ENST00000219302 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
NME3-201ENST00000219302 PRR5LQ6MZQ0 368 aa21.18■□□□□ 0.98
NME3-201ENST00000219302 KLRG1Q96E93 195 aa21.18■□□□□ 0.98
NME3-201ENST00000219302 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
NME3-201ENST00000219302 PDZRN3Q9UPQ7 1066 aa21.18■□□□□ 0.98
NME3-201ENST00000219302 SIPA1L3O60292 1781 aaPredicted RBP21.18■□□□□ 0.98
NME3-201ENST00000219302 CAMTA2O94983 1202 aa21.17■□□□□ 0.98
NME3-201ENST00000219302 PRKAR2BP31323 418 aa21.17■□□□□ 0.98
NME3-201ENST00000219302 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
NME3-201ENST00000219302 SMC1BQ8NDV3 1235 aa21.17■□□□□ 0.98
NME3-201ENST00000219302 WDR90Q96KV7 1748 aa21.17■□□□□ 0.98
NME3-201ENST00000219302 TNRC6CQ9HCJ0 1690 aaKnown RBP21.16■□□□□ 0.98
NME3-201ENST00000219302 VEGFAP15692 232 aaPredicted RBP21.16■□□□□ 0.98
NME3-201ENST00000219302 PDE6BP35913 854 aa21.16■□□□□ 0.98
NME3-201ENST00000219302 CCDC24Q8N4L8 307 aa21.16■□□□□ 0.98
NME3-201ENST00000219302 ZNF330Q9Y3S2 320 aaPredicted RBP21.16■□□□□ 0.98
NME3-201ENST00000219302 BTBD11A6QL63 1104 aa21.15■□□□□ 0.98
NME3-201ENST00000219302 POTECB2RU33 542 aa21.15■□□□□ 0.98
NME3-201ENST00000219302 ZNF622Q969S3 477 aaKnown RBP eCLIP21.15■□□□□ 0.98
NME3-201ENST00000219302 USP16Q9Y5T5 823 aa21.15■□□□□ 0.98
NME3-201ENST00000219302 ANKRD31Q8N7Z5 1873 aa21.15■□□□□ 0.98
NME3-201ENST00000219302 C21orf2O43822 256 aa21.14■□□□□ 0.97
NME3-201ENST00000219302 SETDB2Q96T68 719 aa21.13■□□□□ 0.97
NME3-201ENST00000219302 CCDC88AQ3V6T2 1871 aa21.12■□□□□ 0.97
NME3-201ENST00000219302 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
NME3-201ENST00000219302 SCN7AQ01118 1682 aa21.12■□□□□ 0.97
NME3-201ENST00000219302 PRAMEF22A3QJZ6 481 aa21.11■□□□□ 0.97
NME3-201ENST00000219302 DZIP3Q86Y13 1208 aaKnown RBP21.11■□□□□ 0.97
NME3-201ENST00000219302 ZNF219Q9P2Y4 722 aaPredicted RBP21.11■□□□□ 0.97
NME3-201ENST00000219302 SRGNP10124 158 aa21.1■□□□□ 0.97
NME3-201ENST00000219302 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
NME3-201ENST00000219302 CNBD1Q8NA66 436 aa21.1■□□□□ 0.97
NME3-201ENST00000219302 NUDCQ9Y266 331 aa21.1■□□□□ 0.97
NME3-201ENST00000219302 LTBP3Q9NS15 1303 aa21.09■□□□□ 0.97
NME3-201ENST00000219302 PPP2R1AP30153 589 aa21.09■□□□□ 0.97
NME3-201ENST00000219302 PIP4K2AP48426 406 aaPredicted RBP21.09■□□□□ 0.97
NME3-201ENST00000219302 STYK1Q6J9G0 422 aa21.09■□□□□ 0.97
NME3-201ENST00000219302 DPY19L2Q6NUT2 758 aa21.09■□□□□ 0.97
NME3-201ENST00000219302 CLEC4GQ6UXB4 293 aa21.09■□□□□ 0.97
NME3-201ENST00000219302 MCM10Q7L590 875 aa21.09■□□□□ 0.97
NME3-201ENST00000219302 CNKSR1Q969H4 720 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms