RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 A6NNZ2 444 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 CETN2P41208 172 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 SEPT7Q16181 437 aaKnown RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 TUBB8Q3ZCM7 444 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 FMNL3Q8IVF7 1028 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 ABTB2Q8N961 1025 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 EVI5LQ96CN4 794 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 LRRC27Q9C0I9 530 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 GGNBP2Q9H3C7 697 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 POTEJP0CG39 1038 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 PPP4R3BQ5MIZ7 849 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 NUTM2DQ5VT03 806 aaPredicted RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 TTF1Q15361 905 aaPredicted RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 WWC2Q6AWC2 1192 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 CCDC91Q7Z6B0 441 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 RNF41Q9H4P4 317 aaPredicted RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 LAMC1P11047 1609 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 NUCB1Q02818 461 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 SPA17Q15506 151 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 CFAP70Q5T0N1 1121 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 ALS2CR12Q96Q35 445 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 CTR9Q6PD62 1173 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 LARP1Q6PKG0 1096 aaKnown RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 TAOK3Q9H2K8 898 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 SYCE3A1L190 88 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 GCOM1H8Y6P7 765 aaPredicted RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 MYZAPP0CAP1 466 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 IFI16Q16666 785 aaKnown RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 AACSQ86V21 672 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 CEP152O94986 1710 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 NLRP6P59044 892 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 TUBB2AQ13885 445 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 FKBP15Q5T1M5 1219 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 KIAA1328Q86T90 577 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 TMEM57Q8N5G2 664 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 TUBB2BQ9BVA1 445 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 KIF24Q5T7B8 1368 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 PPIP5K1Q6PFW1 1433 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 MYO1BO43795 1136 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 HSP90AB3PQ58FF7 597 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 CCDC12Q8WUD4 166 aaPredicted RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 TAF4BQ92750 862 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 TSG101Q99816 390 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 V9GYY5 206 aaPredicted RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 TET3O43151 1660 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 SRGAP3O43295 1099 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 DUSP27Q5VZP5 1158 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 LRSAM1Q6UWE0 723 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 SPC24Q8NBT2 197 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 INTS4Q96HW7 963 aaKnown RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 JAKMIP1Q96N16 626 aaKnown RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 UBAC1Q9BSL1 405 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 A0A087WZG4 1122 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 USO1O60763 962 aaKnown RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 CKAP4Q07065 602 aaKnown RBP5.13□□□□□ -1.59
CHD9-201ENST00000219084 CCDC178Q5BJE1 867 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 FEZ1Q99689 392 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 CLIP2Q9UDT6 1046 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 ABCC1P33527 1531 aa5.13□□□□□ -1.59
CHD9-201ENST00000219084 CCDC61Q9Y6R9 512 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 AOX1Q06278 1338 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 REREQ9P2R6 1566 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 BMS1Q14692 1282 aaKnown RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 NBPF1Q3BBV0 1214 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 GIGYF2Q6Y7W6 1299 aaKnown RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 HOOK3Q86VS8 718 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 TNPO1Q92973 898 aaKnown RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 RMND1Q9NWS8 449 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 ABCC10Q5T3U5 1492 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 BTBD11A6QL63 1104 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 KRT18P05783 430 aaKnown RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 SOGA3Q5TF21 947 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 DNAJC2Q99543 621 aaKnown RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 AMPD3Q01432 767 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 BBXQ8WY36 941 aaPredicted RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 YEATS4O95619 227 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 CCDC172P0C7W6 258 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 TOP1P11387 765 aaKnown RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 TTC22Q5TAA0 569 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 TBC1D2Q9BYX2 928 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 STMN4Q9H169 189 aaPredicted RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 CNNM1Q9NRU3 951 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 TTC21AQ8NDW8 1320 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 NF2P35240 595 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 SLF2Q8IX21 1173 aa5.12□□□□□ -1.59
CHD9-201ENST00000219084 NUP153P49790 1475 aaKnown RBP5.12□□□□□ -1.59
CHD9-201ENST00000219084 TRAPPC8Q9Y2L5 1435 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 CFAP100Q494V2 611 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 SULT6B1Q6IMI4 303 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 DENND4BO75064 1496 aaPredicted RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 TAF7Q15545 349 aaPredicted RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 KCNG4Q8TDN1 519 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 TSR2Q969E8 191 aaKnown RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 USP25Q9UHP3 1055 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 ZNF652Q9Y2D9 606 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 TRPM2O94759 1503 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 ATP7AQ04656 1500 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 STX6O43752 255 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 KRT222Q8N1A0 295 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 PRM3Q9NNZ6 103 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms