RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ADAMTS2O95450 1211 aa12.41□□□□□ -0.42
USP11-201ENST00000218348 NAP1L5Q96NT1 182 aaPredicted RBP12.41□□□□□ -0.42
USP11-201ENST00000218348 PHAXQ9H814 394 aaKnown RBP12.41□□□□□ -0.42
USP11-201ENST00000218348 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
USP11-201ENST00000218348 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
USP11-201ENST00000218348 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
USP11-201ENST00000218348 ARHGAP45Q92619 1136 aa12.41□□□□□ -0.42
USP11-201ENST00000218348 C22orf23Q9BZE7 217 aa12.41□□□□□ -0.42
USP11-201ENST00000218348 FRAT2O75474 233 aaPredicted RBP12.4□□□□□ -0.42
USP11-201ENST00000218348 NFKBIBQ15653 356 aa12.4□□□□□ -0.42
USP11-201ENST00000218348 EXOC6BQ9Y2D4 811 aa12.4□□□□□ -0.42
USP11-201ENST00000218348 AFF2P51816 1311 aa12.4□□□□□ -0.42
USP11-201ENST00000218348 NUTM2BA6NNL0 878 aaPredicted RBP12.4□□□□□ -0.42
USP11-201ENST00000218348 NUTM2EB1AL46 878 aaPredicted RBP12.4□□□□□ -0.42
USP11-201ENST00000218348 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
USP11-201ENST00000218348 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.42
USP11-201ENST00000218348 NHSQ6T4R5 1651 aa12.4□□□□□ -0.42
USP11-201ENST00000218348 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 BCL9O00512 1426 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 TEFQ10587 303 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 ARXQ96QS3 562 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
USP11-201ENST00000218348 CSB-PGBD3P0DP91 1061 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 FLIIQ13045 1269 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
USP11-201ENST00000218348 TBC1D32Q96NH3 1257 aa12.39□□□□□ -0.43
USP11-201ENST00000218348 PRAMEF22A3QJZ6 481 aa12.38□□□□□ -0.43
USP11-201ENST00000218348 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
USP11-201ENST00000218348 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
USP11-201ENST00000218348 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
USP11-201ENST00000218348 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
USP11-201ENST00000218348 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
USP11-201ENST00000218348 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
USP11-201ENST00000218348 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
USP11-201ENST00000218348 CEP85Q6P2H3 762 aa12.37□□□□□ -0.43
USP11-201ENST00000218348 BECN1Q14457 450 aa12.37□□□□□ -0.43
USP11-201ENST00000218348 MAP3K5Q99683 1374 aa12.36□□□□□ -0.43
USP11-201ENST00000218348 PIP4K2AP48426 406 aaPredicted RBP12.36□□□□□ -0.43
USP11-201ENST00000218348 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
USP11-201ENST00000218348 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
USP11-201ENST00000218348 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
USP11-201ENST00000218348 RGS12O14924 1447 aa12.36□□□□□ -0.43
USP11-201ENST00000218348 SLC39A6Q13433 755 aa12.36□□□□□ -0.43
USP11-201ENST00000218348 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
USP11-201ENST00000218348 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
USP11-201ENST00000218348 AIMP1Q12904 312 aaKnown RBP12.36□□□□□ -0.43
USP11-201ENST00000218348 C1orf141Q5JVX7 400 aa12.35□□□□□ -0.43
USP11-201ENST00000218348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP11-201ENST00000218348 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
USP11-201ENST00000218348 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
USP11-201ENST00000218348 USP21Q9UK80 565 aa12.35□□□□□ -0.43
USP11-201ENST00000218348 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
USP11-201ENST00000218348 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
USP11-201ENST00000218348 LY75O60449 1722 aa12.34□□□□□ -0.43
USP11-201ENST00000218348 RGPD3A6NKT7 1758 aaPredicted RBP12.34□□□□□ -0.43
USP11-201ENST00000218348 RGPD4Q7Z3J3 1758 aa12.34□□□□□ -0.43
USP11-201ENST00000218348 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
USP11-201ENST00000218348 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
USP11-201ENST00000218348 GSPT1P15170 499 aaKnown RBP12.34□□□□□ -0.43
USP11-201ENST00000218348 IL1RAPL2Q9NP60 686 aa12.34□□□□□ -0.43
USP11-201ENST00000218348 C5P01031 1676 aa12.33□□□□□ -0.44
USP11-201ENST00000218348 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.44
USP11-201ENST00000218348 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
USP11-201ENST00000218348 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
USP11-201ENST00000218348 RREB1Q92766 1687 aa12.33□□□□□ -0.44
USP11-201ENST00000218348 CYP27B1O15528 508 aa12.33□□□□□ -0.44
USP11-201ENST00000218348 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
USP11-201ENST00000218348 PLEKHO1Q53GL0 409 aaPredicted RBP12.32□□□□□ -0.44
USP11-201ENST00000218348 NGLY1Q96IV0 654 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 PTPRCP08575 1304 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 USP35Q9P2H5 1018 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 BTAF1O14981 1849 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 MAP4K4O95819 1239 aaPredicted RBP12.32□□□□□ -0.44
USP11-201ENST00000218348 PROSER3Q2NL68 480 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 STRN4Q9NRL3 753 aa12.32□□□□□ -0.44
USP11-201ENST00000218348 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
USP11-201ENST00000218348 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
USP11-201ENST00000218348 GNAI2P04899 355 aa12.31□□□□□ -0.44
USP11-201ENST00000218348 HSP90AA1P07900 732 aaKnown RBP12.31□□□□□ -0.44
USP11-201ENST00000218348 TJP1Q07157 1748 aa12.31□□□□□ -0.44
USP11-201ENST00000218348 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
USP11-201ENST00000218348 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
USP11-201ENST00000218348 MYL6BP14649 208 aa12.31□□□□□ -0.44
USP11-201ENST00000218348 IL2RBP14784 551 aa12.31□□□□□ -0.44
USP11-201ENST00000218348 BMP2KLQ5H9B9 411 aa12.31□□□□□ -0.44
USP11-201ENST00000218348 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
USP11-201ENST00000218348 GTF2E1P29083 439 aaPredicted RBP12.3□□□□□ -0.44
USP11-201ENST00000218348 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
USP11-201ENST00000218348 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
USP11-201ENST00000218348 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
USP11-201ENST00000218348 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
USP11-201ENST00000218348 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
USP11-201ENST00000218348 EIF4A1P60842 406 aaKnown RBP12.3□□□□□ -0.44
USP11-201ENST00000218348 RILPL2Q969X0 211 aa12.3□□□□□ -0.44
USP11-201ENST00000218348 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
USP11-201ENST00000218348 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms