RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 ZNF790Q6PG37 636 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 ARXQ96QS3 562 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 LOC102724428A0A0B4J2F2 783 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 PLSCR1O15162 318 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 BAG6P46379 1132 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 SIK1P57059 783 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 ZNF827Q17R98 1081 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 KCPQ6ZWJ8 1503 aa14.47□□□□□ -0.09
CDKL1-201ENST00000216378 CCNL1Q9UK58 526 aaPredicted RBP14.46□□□□□ -0.09
CDKL1-201ENST00000216378 TAF7Q15545 349 aaPredicted RBP14.46□□□□□ -0.1
CDKL1-201ENST00000216378 PANK1Q8TE04 598 aa14.46□□□□□ -0.1
CDKL1-201ENST00000216378 PSDA5PKW4 1024 aaPredicted RBP14.45□□□□□ -0.1
CDKL1-201ENST00000216378 HTATSF1O43719 755 aaKnown RBP14.45□□□□□ -0.1
CDKL1-201ENST00000216378 DNAJC10Q8IXB1 793 aa14.45□□□□□ -0.1
CDKL1-201ENST00000216378 CLUAP1Q96AJ1 413 aa14.45□□□□□ -0.1
CDKL1-201ENST00000216378 MBIPQ9NS73 344 aa14.45□□□□□ -0.1
CDKL1-201ENST00000216378 ATP6V1AP38606 617 aa14.45□□□□□ -0.1
CDKL1-201ENST00000216378 LY75O60449 1722 aa14.44□□□□□ -0.1
CDKL1-201ENST00000216378 ELL2O00472 640 aaPredicted RBP14.44□□□□□ -0.1
CDKL1-201ENST00000216378 TAF7LQ5H9L4 462 aa14.44□□□□□ -0.1
CDKL1-201ENST00000216378 CCDC125Q86Z20 511 aa14.44□□□□□ -0.1
CDKL1-201ENST00000216378 PAPPAQ13219 1627 aa14.44□□□□□ -0.1
CDKL1-201ENST00000216378 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
CDKL1-201ENST00000216378 EXOSC9Q06265 439 aaKnown RBP14.43□□□□□ -0.1
CDKL1-201ENST00000216378 TSPYL4Q9UJ04 414 aa14.43□□□□□ -0.1
CDKL1-201ENST00000216378 USP16Q9Y5T5 823 aa14.43□□□□□ -0.1
CDKL1-201ENST00000216378 CHL1O00533 1208 aa14.43□□□□□ -0.1
CDKL1-201ENST00000216378 ZNF853P0CG23 659 aa14.43□□□□□ -0.1
CDKL1-201ENST00000216378 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
CDKL1-201ENST00000216378 TSPYL6Q8N831 410 aa14.43□□□□□ -0.1
CDKL1-201ENST00000216378 NECTIN2Q92692 538 aa14.43□□□□□ -0.1
CDKL1-201ENST00000216378 EIF4A1P60842 406 aaKnown RBP14.42□□□□□ -0.1
CDKL1-201ENST00000216378 NUP188Q5SRE5 1749 aa14.42□□□□□ -0.1
CDKL1-201ENST00000216378 MYH14Q7Z406 1995 aaKnown RBP14.42□□□□□ -0.1
CDKL1-201ENST00000216378 COG6Q9Y2V7 657 aa14.42□□□□□ -0.1
CDKL1-201ENST00000216378 RARSP54136 660 aaKnown RBP14.41□□□□□ -0.1
CDKL1-201ENST00000216378 R3HDM1Q15032 1099 aaKnown RBP14.41□□□□□ -0.1
CDKL1-201ENST00000216378 WDR63Q8IWG1 891 aa14.41□□□□□ -0.1
CDKL1-201ENST00000216378 C8orf58Q8NAV2 365 aa14.41□□□□□ -0.1
CDKL1-201ENST00000216378 UBR2Q8IWV8 1755 aa14.41□□□□□ -0.1
CDKL1-201ENST00000216378 RREB1Q92766 1687 aa14.41□□□□□ -0.1
CDKL1-201ENST00000216378 KDM3BQ7LBC6 1761 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 TJP1Q07157 1748 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 ANXA1P04083 346 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 A1BGP04217 495 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 RLBP1P12271 317 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 CCDC27Q2M243 656 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 TTC5Q8N0Z6 440 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 CFAP44Q96MT7 982 aa14.4□□□□□ -0.1
CDKL1-201ENST00000216378 C5P01031 1676 aa14.39□□□□□ -0.11
CDKL1-201ENST00000216378 HEG1Q9ULI3 1381 aa14.39□□□□□ -0.11
CDKL1-201ENST00000216378 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
CDKL1-201ENST00000216378 INTS5Q6P9B9 1019 aaKnown RBP14.39□□□□□ -0.11
CDKL1-201ENST00000216378 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
CDKL1-201ENST00000216378 TAF1LQ8IZX4 1826 aa14.38□□□□□ -0.11
CDKL1-201ENST00000216378 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
CDKL1-201ENST00000216378 PHF14O94880 888 aa14.38□□□□□ -0.11
CDKL1-201ENST00000216378 SMARCC1Q92922 1105 aaPredicted RBP14.38□□□□□ -0.11
CDKL1-201ENST00000216378 ZBTB1Q9Y2K1 713 aa14.38□□□□□ -0.11
CDKL1-201ENST00000216378 CYP19A1P11511 503 aaPredicted RBP14.38□□□□□ -0.11
CDKL1-201ENST00000216378 CRKLP46109 303 aaKnown RBP14.38□□□□□ -0.11
CDKL1-201ENST00000216378 PROSER3Q2NL68 480 aa14.38□□□□□ -0.11
CDKL1-201ENST00000216378 FMNL2Q96PY5 1086 aa14.37□□□□□ -0.11
CDKL1-201ENST00000216378 MYH16Q9H6N6 1097 aa14.37□□□□□ -0.11
CDKL1-201ENST00000216378 NBPF26B4DH59 902 aa14.37□□□□□ -0.11
CDKL1-201ENST00000216378 EIF2S2P20042 333 aaKnown RBP14.37□□□□□ -0.11
CDKL1-201ENST00000216378 SLC27A3Q5K4L6 730 aa14.37□□□□□ -0.11
CDKL1-201ENST00000216378 NBPF14Q5TI25 921 aa14.37□□□□□ -0.11
CDKL1-201ENST00000216378 NBPF10Q6P3W6 841 aaKnown RBP14.37□□□□□ -0.11
CDKL1-201ENST00000216378 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
CDKL1-201ENST00000216378 IFT57Q9NWB7 429 aa14.37□□□□□ -0.11
CDKL1-201ENST00000216378 SLC15A2Q16348 729 aa14.36□□□□□ -0.11
CDKL1-201ENST00000216378 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
CDKL1-201ENST00000216378 C4BP0C0L5 1744 aa14.36□□□□□ -0.11
CDKL1-201ENST00000216378 GNPATO15228 680 aa14.35□□□□□ -0.11
CDKL1-201ENST00000216378 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
CDKL1-201ENST00000216378 RGPD3A6NKT7 1758 aaPredicted RBP14.35□□□□□ -0.11
CDKL1-201ENST00000216378 RGPD4Q7Z3J3 1758 aa14.35□□□□□ -0.11
CDKL1-201ENST00000216378 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
CDKL1-201ENST00000216378 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
CDKL1-201ENST00000216378 ZNF428Q96B54 188 aa14.35□□□□□ -0.11
CDKL1-201ENST00000216378 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
CDKL1-201ENST00000216378 PNPLA7Q6ZV29 1317 aa14.35□□□□□ -0.11
CDKL1-201ENST00000216378 COL5A3P25940 1745 aaPredicted RBP14.35□□□□□ -0.11
CDKL1-201ENST00000216378 COL23A1Q86Y22 540 aaPredicted RBP14.34□□□□□ -0.11
CDKL1-201ENST00000216378 SMC4Q9NTJ3 1288 aa14.34□□□□□ -0.11
CDKL1-201ENST00000216378 TFCP2L1Q9NZI6 479 aa14.34□□□□□ -0.11
CDKL1-201ENST00000216378 BRPF3Q9ULD4 1205 aa14.34□□□□□ -0.11
CDKL1-201ENST00000216378 GNAI1P63096 354 aa14.34□□□□□ -0.11
CDKL1-201ENST00000216378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.33□□□□□ -0.12
CDKL1-201ENST00000216378 SNRPA1P09661 255 aaKnown RBP14.33□□□□□ -0.12
CDKL1-201ENST00000216378 PDIA6Q15084 440 aa14.33□□□□□ -0.12
CDKL1-201ENST00000216378 MYL6BP14649 208 aa14.33□□□□□ -0.12
CDKL1-201ENST00000216378 SRP68Q9UHB9 627 aaKnown RBP14.33□□□□□ -0.12
CDKL1-201ENST00000216378 IGHDP01880 384 aa14.32□□□□□ -0.12
CDKL1-201ENST00000216378 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
CDKL1-201ENST00000216378 ZBTB7AO95365 584 aa14.31□□□□□ -0.12
CDKL1-201ENST00000216378 LRP10Q7Z4F1 713 aa14.31□□□□□ -0.12
CDKL1-201ENST00000216378 AK7Q96M32 723 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms