RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 HMMRO75330 724 aa19.31■□□□□ 0.68
SNAPC1-201ENST00000216294 MX1P20591 662 aa19.31■□□□□ 0.68
SNAPC1-201ENST00000216294 HSP90AA2PQ14568 343 aaPredicted RBP19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 ANP32BQ92688 251 aaKnown RBP19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 LRRCC1Q9C099 1032 aa19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 STRCP1A6NGW2 1772 aa19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 GADD45BO75293 160 aaPredicted RBP19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 ATF3P18847 181 aa19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 ZNF445P59923 1031 aa19.3■□□□□ 0.68
SNAPC1-201ENST00000216294 PTMSP20962 102 aa19.29■□□□□ 0.68
SNAPC1-201ENST00000216294 ARHGEF25Q86VW2 580 aa19.29■□□□□ 0.68
SNAPC1-201ENST00000216294 IL17REQ8NFR9 667 aa19.29■□□□□ 0.68
SNAPC1-201ENST00000216294 ANXA1P04083 346 aa19.29■□□□□ 0.68
SNAPC1-201ENST00000216294 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
SNAPC1-201ENST00000216294 ZSCAN30Q86W11 494 aa19.29■□□□□ 0.68
SNAPC1-201ENST00000216294 STK31Q9BXU1 1019 aa19.29■□□□□ 0.68
SNAPC1-201ENST00000216294 CHMLP26374 656 aa19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 MST1RQ04912 1400 aa19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 SLIT3O75094 1523 aa19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 HTATSF1O43719 755 aaKnown RBP19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 CPA1P15085 419 aa19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 EIF2S2P20042 333 aaKnown RBP19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 CCT4P50991 539 aaKnown RBP19.28■□□□□ 0.68
SNAPC1-201ENST00000216294 MSNP26038 577 aaKnown RBP19.27■□□□□ 0.68
SNAPC1-201ENST00000216294 DDX54Q8TDD1 881 aaKnown RBP19.27■□□□□ 0.68
SNAPC1-201ENST00000216294 CWC22Q9HCG8 908 aaKnown RBP19.27■□□□□ 0.68
SNAPC1-201ENST00000216294 LRRC37A3O60309 1634 aa19.27■□□□□ 0.67
SNAPC1-201ENST00000216294 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.67
SNAPC1-201ENST00000216294 ARID3AQ99856 593 aa19.27■□□□□ 0.67
SNAPC1-201ENST00000216294 SALL3Q9BXA9 1300 aa19.26■□□□□ 0.67
SNAPC1-201ENST00000216294 AXIN2Q9Y2T1 843 aa19.26■□□□□ 0.67
SNAPC1-201ENST00000216294 KIF1AQ12756 1690 aa19.25■□□□□ 0.67
SNAPC1-201ENST00000216294 USP44Q9H0E7 712 aa19.25■□□□□ 0.67
SNAPC1-201ENST00000216294 OSBPL3Q9H4L5 887 aa19.25■□□□□ 0.67
SNAPC1-201ENST00000216294 R3HCC1Q9Y3T6 440 aaKnown RBP19.25■□□□□ 0.67
SNAPC1-201ENST00000216294 ANKRD24Q8TF21 1146 aa19.25■□□□□ 0.67
SNAPC1-201ENST00000216294 ZC3H6P61129 1189 aaKnown RBP19.24■□□□□ 0.67
SNAPC1-201ENST00000216294 RGPD2P0DJD1 1756 aa19.24■□□□□ 0.67
SNAPC1-201ENST00000216294 PHRF1Q9P1Y6 1649 aaKnown RBP19.24■□□□□ 0.67
SNAPC1-201ENST00000216294 ATP8B2P98198 1209 aa19.24■□□□□ 0.67
SNAPC1-201ENST00000216294 IBTKQ9P2D0 1353 aaPredicted RBP19.22■□□□□ 0.67
SNAPC1-201ENST00000216294 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
SNAPC1-201ENST00000216294 BRD1O95696 1058 aa19.22■□□□□ 0.67
SNAPC1-201ENST00000216294 LRSAM1Q6UWE0 723 aa19.22■□□□□ 0.67
SNAPC1-201ENST00000216294 LGR6Q9HBX8 967 aa19.22■□□□□ 0.67
SNAPC1-201ENST00000216294 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
SNAPC1-201ENST00000216294 KCNQ3O43525 872 aa19.21■□□□□ 0.67
SNAPC1-201ENST00000216294 NBPF7P0C2Y1 421 aaPredicted RBP19.21■□□□□ 0.67
SNAPC1-201ENST00000216294 TAF7Q15545 349 aaPredicted RBP19.21■□□□□ 0.67
SNAPC1-201ENST00000216294 VSIG10Q8N0Z9 540 aa19.21■□□□□ 0.67
SNAPC1-201ENST00000216294 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
SNAPC1-201ENST00000216294 DCCP43146 1447 aa19.21■□□□□ 0.67
SNAPC1-201ENST00000216294 MED1Q15648 1581 aaPredicted RBP19.2■□□□□ 0.66
SNAPC1-201ENST00000216294 ZNF830Q96NB3 372 aaPredicted RBP19.2■□□□□ 0.66
SNAPC1-201ENST00000216294 KDM4FA0A1W2PPD8 638 aa19.2■□□□□ 0.66
SNAPC1-201ENST00000216294 CCDC30Q5VVM6 783 aa19.2■□□□□ 0.66
SNAPC1-201ENST00000216294 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
SNAPC1-201ENST00000216294 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 CADPS2Q86UW7 1296 aa19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 RASEFQ8IZ41 740 aa19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 CABLES1Q8TDN4 633 aa19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 USP48Q86UV5 1035 aa19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 TUBGCP6Q96RT7 1819 aa19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 CEMIPQ8WUJ3 1361 aa19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 SOS1Q07889 1333 aaPredicted RBP19.19■□□□□ 0.66
SNAPC1-201ENST00000216294 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 GNAI3P08754 354 aa19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 PDLIM2Q96JY6 352 aa19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 PXDNQ92626 1479 aa19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 OFD1O75665 1012 aa19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 COL9A3Q14050 684 aaPredicted RBP19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 CNPY2Q9Y2B0 182 aa19.18■□□□□ 0.66
SNAPC1-201ENST00000216294 SRGAP3O43295 1099 aa19.17■□□□□ 0.66
SNAPC1-201ENST00000216294 CUL4AQ13619 759 aa19.17■□□□□ 0.66
SNAPC1-201ENST00000216294 MPRIPQ6WCQ1 1025 aa19.17■□□□□ 0.66
SNAPC1-201ENST00000216294 LMTK3Q96Q04 1460 aa19.17■□□□□ 0.66
SNAPC1-201ENST00000216294 MCCP23508 829 aa19.17■□□□□ 0.66
SNAPC1-201ENST00000216294 PLEKHO1Q53GL0 409 aaPredicted RBP19.16■□□□□ 0.66
SNAPC1-201ENST00000216294 ERBB3P21860 1342 aa19.16■□□□□ 0.66
SNAPC1-201ENST00000216294 NPHP3Q7Z494 1330 aa19.16■□□□□ 0.66
SNAPC1-201ENST00000216294 NCAPD2Q15021 1401 aa19.16■□□□□ 0.66
SNAPC1-201ENST00000216294 LARGE1O95461 756 aa19.16■□□□□ 0.66
SNAPC1-201ENST00000216294 AKAP4Q5JQC9 854 aa19.16■□□□□ 0.66
SNAPC1-201ENST00000216294 NOL7Q9UMY1 257 aaKnown RBP19.16■□□□□ 0.66
SNAPC1-201ENST00000216294 C17orf53Q8N3J3 647 aaPredicted RBP19.15■□□□□ 0.66
SNAPC1-201ENST00000216294 SRCIN1Q9C0H9 1055 aa19.15■□□□□ 0.66
SNAPC1-201ENST00000216294 FAM13BQ9NYF5 915 aa19.15■□□□□ 0.66
SNAPC1-201ENST00000216294 CHPF2Q9P2E5 772 aa19.15■□□□□ 0.66
SNAPC1-201ENST00000216294 PI4K2BQ8TCG2 481 aa19.14■□□□□ 0.65
SNAPC1-201ENST00000216294 RHPN1Q8TCX5 695 aa19.14■□□□□ 0.65
SNAPC1-201ENST00000216294 BABAM1Q9NWV8 329 aa19.14■□□□□ 0.65
SNAPC1-201ENST00000216294 PI4KAP2A4QPH2 592 aa19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 RRP9O43818 475 aaKnown RBP19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 AK2P54819 239 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1068.8 ms