RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TUBGCP6Q96RT7 1819 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 ZNF335Q9H4Z2 1342 aaPredicted RBP9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 OSBPL3Q9H4L5 887 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 SALL3Q9BXA9 1300 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 SSH3Q8TE77 659 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 ABCC6O95255 1503 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 SRGAP3O43295 1099 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 MX1P20591 662 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 CASC1Q6TDU7 716 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 IL1RAPL2Q9NP60 686 aa9.84□□□□□ -0.83
HMGXB4-201ENST00000216106 CPDO75976 1380 aa9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 PKD1L3Q7Z443 1732 aa9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 KDM4FA0A1W2PPD8 638 aa9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 CYP27B1O15528 508 aa9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 AIMP1Q12904 312 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 SNX21Q969T3 373 aa9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 CWF19L2Q2TBE0 894 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 SURF6O75683 361 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-201ENST00000216106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.841e-6■■■□□ 18.2
HMGXB4-201ENST00000216106 POLA2Q14181 598 aa9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 KSR2Q6VAB6 950 aa9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 PRDM11Q9NQV5 511 aa9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 HYPKQ9NX55 129 aa9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 USP26Q9BXU7 913 aa9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 SLAIN2Q9P270 581 aa9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 MYL6BP14649 208 aa9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 ZNF496Q96IT1 587 aaPredicted RBP9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 DDX21Q9NR30 783 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 C9orf78Q9NZ63 289 aaPredicted RBP9.82□□□□□ -0.84
HMGXB4-201ENST00000216106 PDIA6Q15084 440 aa9.81□□□□□ -0.84
HMGXB4-201ENST00000216106 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
HMGXB4-201ENST00000216106 EIF5BO60841 1220 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-201ENST00000216106 NUTM1Q86Y26 1132 aa9.81□□□□□ -0.84
HMGXB4-201ENST00000216106 MRC1P22897 1456 aa9.81□□□□□ -0.84
HMGXB4-201ENST00000216106 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
HMGXB4-201ENST00000216106 RILPL2Q969X0 211 aa9.81□□□□□ -0.84
HMGXB4-201ENST00000216106 PIP4K2AP48426 406 aaPredicted RBP9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 TTC5Q8N0Z6 440 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 RHPN1Q8TCX5 695 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 CHMP5Q9NZZ3 219 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 SOS2Q07890 1332 aaPredicted RBP9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 DDX58O95786 925 aaKnown RBP9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 TOM1L2Q6ZVM7 507 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 ABCA3Q99758 1704 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 PARP4Q9UKK3 1724 aaKnown RBP9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 ERC2O15083 957 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 RAB11FIP3O75154 756 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 ALDH1L1O75891 902 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 REC8O95072 547 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 FOXD4L1Q9NU39 408 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 AK9Q5TCS8 1911 aa9.8□□□□□ -0.84
HMGXB4-201ENST00000216106 K7ELQ4 463 aaPredicted RBP9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 GSE1Q14687 1217 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 STAP2Q9UGK3 403 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 WDR17Q8IZU2 1322 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 HSP90AA1P07900 732 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 CABP4P57796 275 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 RIC3Q7Z5B4 369 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 UNC5CLQ8IV45 518 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 LINS1Q8NG48 757 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 KIF1BPQ96EK5 621 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 USP16Q9Y5T5 823 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 COL5A2P05997 1499 aaPredicted RBP9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 OS9Q13438 667 aaPredicted RBP9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 XAGE3Q8WTP9 111 aa9.79□□□□□ -0.84
HMGXB4-201ENST00000216106 PLEKHG2Q9H7P9 1386 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 GRM8O00222 908 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 RABEP1Q15276 862 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 COPS6Q7L5N1 327 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 MAP4K4O95819 1239 aaPredicted RBP9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 IGKV5-2P06315 115 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 FMNL2Q96PY5 1086 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 PA2G4Q9UQ80 394 aaKnown RBP9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 DDIT3P35638 169 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 MTX1Q13505 466 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 SUCLG2Q96I99 432 aa9.78□□□□□ -0.84
HMGXB4-201ENST00000216106 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 STRN4Q9NRL3 753 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 GLI3P10071 1580 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 AOX1Q06278 1338 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 PCDH11XQ9BZA7 1347 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 PCDH11YQ9BZA8 1340 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 CHMLP26374 656 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 BICC1Q9H694 974 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 LARP1Q6PKG0 1096 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 ZCRB1Q8TBF4 217 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 PI4K2BQ8TCG2 481 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 KAZALD1Q96I82 304 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 MYD88Q99836 296 aa9.77□□□□□ -0.85
HMGXB4-201ENST00000216106 LAMB4A4D0S4 1761 aa9.76□□□□□ -0.85
HMGXB4-201ENST00000216106 NEXNQ0ZGT2 675 aa9.76□□□□□ -0.85
HMGXB4-201ENST00000216106 AFDNP55196 1824 aaKnown RBP9.76□□□□□ -0.85
HMGXB4-201ENST00000216106 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms