RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.31□□□□□ -0.28
APOBEC3D-201ENST00000216099 SMC5Q8IY18 1101 aa13.31□□□□□ -0.28
APOBEC3D-201ENST00000216099 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
APOBEC3D-201ENST00000216099 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
APOBEC3D-201ENST00000216099 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
APOBEC3D-201ENST00000216099 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
APOBEC3D-201ENST00000216099 ABCC6O95255 1503 aa13.3□□□□□ -0.28
APOBEC3D-201ENST00000216099 RGS12O14924 1447 aa13.3□□□□□ -0.28
APOBEC3D-201ENST00000216099 CLSTN1O94985 981 aa13.3□□□□□ -0.28
APOBEC3D-201ENST00000216099 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
APOBEC3D-201ENST00000216099 ZBTB7BO15156 539 aaPredicted RBP13.29□□□□□ -0.28
APOBEC3D-201ENST00000216099 PTPRCP08575 1304 aa13.29□□□□□ -0.28
APOBEC3D-201ENST00000216099 SIPA1L3O60292 1781 aaPredicted RBP13.29□□□□□ -0.28
APOBEC3D-201ENST00000216099 ORAI2Q96SN7 254 aa13.29□□□□□ -0.28
APOBEC3D-201ENST00000216099 ADAMTS7Q9UKP4 1686 aa13.28□□□□□ -0.28
APOBEC3D-201ENST00000216099 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
APOBEC3D-201ENST00000216099 FOXO3O43524 673 aa13.28□□□□□ -0.28
APOBEC3D-201ENST00000216099 COL18A1P39060 1754 aa13.28□□□□□ -0.28
APOBEC3D-201ENST00000216099 STRCQ7RTU9 1775 aa13.28□□□□□ -0.28
APOBEC3D-201ENST00000216099 RFX1P22670 979 aa13.28□□□□□ -0.28
APOBEC3D-201ENST00000216099 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
APOBEC3D-201ENST00000216099 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
APOBEC3D-201ENST00000216099 GIMAP6Q6P9H5 292 aa13.27□□□□□ -0.29
APOBEC3D-201ENST00000216099 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
APOBEC3D-201ENST00000216099 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
APOBEC3D-201ENST00000216099 FOSBP53539 338 aa13.27□□□□□ -0.29
APOBEC3D-201ENST00000216099 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.29
APOBEC3D-201ENST00000216099 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
APOBEC3D-201ENST00000216099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
APOBEC3D-201ENST00000216099 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
APOBEC3D-201ENST00000216099 MARCH6O60337 910 aa13.26□□□□□ -0.29
APOBEC3D-201ENST00000216099 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
APOBEC3D-201ENST00000216099 CEMIPQ8WUJ3 1361 aa13.25□□□□□ -0.29
APOBEC3D-201ENST00000216099 GCP02774 474 aa13.25□□□□□ -0.29
APOBEC3D-201ENST00000216099 SND1Q7KZF4 910 aaKnown RBP eCLIP13.25□□□□□ -0.29
APOBEC3D-201ENST00000216099 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
APOBEC3D-201ENST00000216099 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
APOBEC3D-201ENST00000216099 RTL5Q5HYW3 569 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3D-201ENST00000216099 DCAF8Q5TAQ9 597 aa13.24□□□□□ -0.29
APOBEC3D-201ENST00000216099 GCC1Q96CN9 775 aa13.24□□□□□ -0.29
APOBEC3D-201ENST00000216099 LTV1Q96GA3 475 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3D-201ENST00000216099 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3D-201ENST00000216099 NUCB1Q02818 461 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 POM121CA8CG34 1229 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 ATF3P18847 181 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 SCN11AQ9UI33 1791 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
APOBEC3D-201ENST00000216099 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3D-201ENST00000216099 IL17REQ8NFR9 667 aa13.22□□□□□ -0.29
APOBEC3D-201ENST00000216099 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
APOBEC3D-201ENST00000216099 PXDNQ92626 1479 aa13.22□□□□□ -0.29
APOBEC3D-201ENST00000216099 NUBP1P53384 320 aa13.22□□□□□ -0.29
APOBEC3D-201ENST00000216099 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
APOBEC3D-201ENST00000216099 GPR37O15354 613 aa13.21□□□□□ -0.29
APOBEC3D-201ENST00000216099 RYDENQ9NUL5 291 aaKnown RBP13.21□□□□□ -0.29
APOBEC3D-201ENST00000216099 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.3
APOBEC3D-201ENST00000216099 ATP10DQ9P241 1426 aa13.21□□□□□ -0.3
APOBEC3D-201ENST00000216099 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
APOBEC3D-201ENST00000216099 ANKRD62A6NC57 917 aa13.2□□□□□ -0.3
APOBEC3D-201ENST00000216099 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
APOBEC3D-201ENST00000216099 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
APOBEC3D-201ENST00000216099 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
APOBEC3D-201ENST00000216099 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
APOBEC3D-201ENST00000216099 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
APOBEC3D-201ENST00000216099 AKAP4Q5JQC9 854 aa13.19□□□□□ -0.3
APOBEC3D-201ENST00000216099 CCDC30Q5VVM6 783 aa13.19□□□□□ -0.3
APOBEC3D-201ENST00000216099 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
APOBEC3D-201ENST00000216099 STK31Q9BXU1 1019 aa13.19□□□□□ -0.3
APOBEC3D-201ENST00000216099 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
APOBEC3D-201ENST00000216099 ABCA3Q99758 1704 aa13.19□□□□□ -0.3
APOBEC3D-201ENST00000216099 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
APOBEC3D-201ENST00000216099 SIRT2Q8IXJ6 389 aa13.18□□□□□ -0.3
APOBEC3D-201ENST00000216099 ANKRD24Q8TF21 1146 aa13.18□□□□□ -0.3
APOBEC3D-201ENST00000216099 HOXB7P09629 217 aa13.18□□□□□ -0.3
APOBEC3D-201ENST00000216099 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
APOBEC3D-201ENST00000216099 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
APOBEC3D-201ENST00000216099 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
APOBEC3D-201ENST00000216099 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
APOBEC3D-201ENST00000216099 ANKRD44Q8N8A2 993 aa13.17□□□□□ -0.3
APOBEC3D-201ENST00000216099 PARP4Q9UKK3 1724 aaKnown RBP13.17□□□□□ -0.3
APOBEC3D-201ENST00000216099 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
APOBEC3D-201ENST00000216099 SNRKQ9NRH2 765 aa13.17□□□□□ -0.3
APOBEC3D-201ENST00000216099 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
APOBEC3D-201ENST00000216099 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
APOBEC3D-201ENST00000216099 RIPOR2Q9Y4F9 1068 aa13.16□□□□□ -0.3
APOBEC3D-201ENST00000216099 ERBB3P21860 1342 aa13.16□□□□□ -0.3
APOBEC3D-201ENST00000216099 FECHP22830 423 aa13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 KCNA1Q09470 495 aa13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 G2E3Q7L622 706 aa13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 DCTPP1Q9H773 170 aa13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 CPDO75976 1380 aa13.15□□□□□ -0.3
APOBEC3D-201ENST00000216099 NHSL1Q5SYE7 1610 aa13.15□□□□□ -0.31
APOBEC3D-201ENST00000216099 SEC24BO95487 1268 aa13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms