RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
CBX6-201ENST00000216083 CCT4P50991 539 aaKnown RBP18.29■□□□□ 0.52
CBX6-201ENST00000216083 DDRGK1Q96HY6 314 aa18.28■□□□□ 0.52
CBX6-201ENST00000216083 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
CBX6-201ENST00000216083 SHANK3Q9BYB0 1731 aa18.28■□□□□ 0.52
CBX6-201ENST00000216083 SMC5Q8IY18 1101 aa18.28■□□□□ 0.52
CBX6-201ENST00000216083 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
CBX6-201ENST00000216083 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
CBX6-201ENST00000216083 PDIA6Q15084 440 aa18.27■□□□□ 0.52
CBX6-201ENST00000216083 C8orf37Q96NL8 207 aa18.27■□□□□ 0.52
CBX6-201ENST00000216083 APBB1O00213 710 aa18.27■□□□□ 0.51
CBX6-201ENST00000216083 C5P01031 1676 aa18.26■□□□□ 0.51
CBX6-201ENST00000216083 FMNL2Q96PY5 1086 aa18.26■□□□□ 0.51
CBX6-201ENST00000216083 CACNA1FO60840 1977 aa18.26■□□□□ 0.51
CBX6-201ENST00000216083 A0A0G2JS52 829 aa18.26■□□□□ 0.51
CBX6-201ENST00000216083 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
CBX6-201ENST00000216083 CEP85Q6P2H3 762 aa18.26■□□□□ 0.51
CBX6-201ENST00000216083 MRC1P22897 1456 aa18.26■□□□□ 0.51
CBX6-201ENST00000216083 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
CBX6-201ENST00000216083 ADCY9O60503 1353 aa18.25■□□□□ 0.51
CBX6-201ENST00000216083 ATP10DQ9P241 1426 aa18.25■□□□□ 0.51
CBX6-201ENST00000216083 SYTL4Q96C24 671 aaPredicted RBP18.25■□□□□ 0.51
CBX6-201ENST00000216083 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
CBX6-201ENST00000216083 DNAAF4Q8WXU2 420 aa18.25■□□□□ 0.51
CBX6-201ENST00000216083 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
CBX6-201ENST00000216083 PLCH1Q4KWH8 1693 aa18.25■□□□□ 0.51
CBX6-201ENST00000216083 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
CBX6-201ENST00000216083 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
CBX6-201ENST00000216083 EXOC5O00471 708 aa18.24■□□□□ 0.51
CBX6-201ENST00000216083 USP44Q9H0E7 712 aa18.24■□□□□ 0.51
CBX6-201ENST00000216083 RRAGDQ9NQL2 400 aaPredicted RBP18.24■□□□□ 0.51
CBX6-201ENST00000216083 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
CBX6-201ENST00000216083 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
CBX6-201ENST00000216083 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 NGLY1Q96IV0 654 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 TMOD3Q9NYL9 352 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 PLEKHG2Q9H7P9 1386 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 CWF19L2Q2TBE0 894 aaKnown RBP18.23■□□□□ 0.51
CBX6-201ENST00000216083 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 PIGBQ92521 554 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 SRCIN1Q9C0H9 1055 aa18.23■□□□□ 0.51
CBX6-201ENST00000216083 LRRFIP2Q9Y608 721 aaKnown RBP18.23■□□□□ 0.51
CBX6-201ENST00000216083 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
CBX6-201ENST00000216083 BEND3Q5T5X7 828 aa18.22■□□□□ 0.51
CBX6-201ENST00000216083 COPS6Q7L5N1 327 aa18.22■□□□□ 0.51
CBX6-201ENST00000216083 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
CBX6-201ENST00000216083 SLKQ9H2G2 1235 aaPredicted RBP18.22■□□□□ 0.51
CBX6-201ENST00000216083 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
CBX6-201ENST00000216083 NUCB1Q02818 461 aa18.22■□□□□ 0.51
CBX6-201ENST00000216083 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
CBX6-201ENST00000216083 HYPKQ9NX55 129 aa18.21■□□□□ 0.51
CBX6-201ENST00000216083 GNAI2P04899 355 aa18.21■□□□□ 0.51
CBX6-201ENST00000216083 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
CBX6-201ENST00000216083 PNMA6EA0A0J9YXQ4 647 aa18.2■□□□□ 0.5
CBX6-201ENST00000216083 A1BGP04217 495 aa18.2■□□□□ 0.5
CBX6-201ENST00000216083 FAM161AQ3B820 660 aa18.2■□□□□ 0.5
CBX6-201ENST00000216083 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
CBX6-201ENST00000216083 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
CBX6-201ENST00000216083 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
CBX6-201ENST00000216083 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
CBX6-201ENST00000216083 SMARCA5O60264 1052 aaPredicted RBP18.19■□□□□ 0.5
CBX6-201ENST00000216083 UBTFL1P0CB47 393 aaPredicted RBP18.19■□□□□ 0.5
CBX6-201ENST00000216083 DDB1Q16531 1140 aa18.19■□□□□ 0.5
CBX6-201ENST00000216083 NBPF26B4DH59 902 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 HSPA1LP34931 641 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 NBPF10Q6P3W6 841 aaKnown RBP18.18■□□□□ 0.5
CBX6-201ENST00000216083 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 FAM43AQ8N2R8 423 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 NBPF15Q8N660 670 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
CBX6-201ENST00000216083 SPATA31A5Q5VU36 1347 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 SPATA31A7Q8IWB4 1347 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 GNAI3P08754 354 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 FAM98CQ17RN3 349 aaKnown RBP18.18■□□□□ 0.5
CBX6-201ENST00000216083 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
CBX6-201ENST00000216083 JCADQ9P266 1359 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
CBX6-201ENST00000216083 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
CBX6-201ENST00000216083 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
CBX6-201ENST00000216083 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
CBX6-201ENST00000216083 GLI3P10071 1580 aa18.17■□□□□ 0.5
CBX6-201ENST00000216083 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
CBX6-201ENST00000216083 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
CBX6-201ENST00000216083 JARID2Q92833 1246 aaPredicted RBP18.17■□□□□ 0.5
CBX6-201ENST00000216083 SLIT2O94813 1529 aa18.17■□□□□ 0.5
CBX6-201ENST00000216083 SEC24BO95487 1268 aa18.16■□□□□ 0.5
CBX6-201ENST00000216083 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
CBX6-201ENST00000216083 UNC5CLQ8IV45 518 aa18.16■□□□□ 0.5
CBX6-201ENST00000216083 MARCH10Q8NA82 808 aaPredicted RBP18.16■□□□□ 0.5
CBX6-201ENST00000216083 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
CBX6-201ENST00000216083 ZMYND15Q9H091 742 aa18.16■□□□□ 0.5
CBX6-201ENST00000216083 GZF1Q9H116 711 aaPredicted RBP18.16■□□□□ 0.5
CBX6-201ENST00000216083 SPRYD3Q8NCJ5 442 aa18.15■□□□□ 0.5
CBX6-201ENST00000216083 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
CBX6-201ENST00000216083 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms