RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
PKP2-201ENST00000070846 LMBR1LQ6UX01 489 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 ANKRD18AQ8IVF6 992 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
PKP2-201ENST00000070846 ATP7AQ04656 1500 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 TRPM2O94759 1503 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 C8orf58Q8NAV2 365 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 PRIM1P49642 420 aaKnown RBP13.52□□□□□ -0.24
PKP2-201ENST00000070846 CCNL1Q9UK58 526 aaPredicted RBP13.52□□□□□ -0.24
PKP2-201ENST00000070846 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.24
PKP2-201ENST00000070846 RANBP6O60518 1105 aaKnown RBP13.52□□□□□ -0.25
PKP2-201ENST00000070846 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
PKP2-201ENST00000070846 CTTNBP2Q8WZ74 1663 aa13.52□□□□□ -0.25
PKP2-201ENST00000070846 STK38Q15208 465 aa13.52□□□□□ -0.25
PKP2-201ENST00000070846 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.25
PKP2-201ENST00000070846 UPF3BQ9BZI7 483 aaKnown RBP13.52□□□□□ -0.25
PKP2-201ENST00000070846 FIBPO43427 364 aa13.51□□□□□ -0.25
PKP2-201ENST00000070846 KRT18P05783 430 aaKnown RBP13.51□□□□□ -0.25
PKP2-201ENST00000070846 CCDC82Q8N4S0 544 aa13.51□□□□□ -0.25
PKP2-201ENST00000070846 GOLIM4O00461 696 aa13.51□□□□□ -0.25
PKP2-201ENST00000070846 ANKRD1Q15327 319 aa13.51□□□□□ -0.25
PKP2-201ENST00000070846 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
PKP2-201ENST00000070846 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
PKP2-201ENST00000070846 CDCA7Q9BWT1 371 aaPredicted RBP13.51□□□□□ -0.25
PKP2-201ENST00000070846 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 LDHCP07864 332 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 TXLNAP40222 546 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 SLF2Q8IX21 1173 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 F8W031 263 aaPredicted RBP13.5□□□□□ -0.25
PKP2-201ENST00000070846 GRM1Q13255 1194 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 KRT32Q14532 448 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
PKP2-201ENST00000070846 ZHX3Q9H4I2 956 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 MEIS3Q99687 375 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 FEZ1Q99689 392 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 ECHDC1Q9NTX5 307 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 KSR2Q6VAB6 950 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
PKP2-201ENST00000070846 TCOF1Q13428 1488 aaKnown RBP13.49□□□□□ -0.25
PKP2-201ENST00000070846 ABCC1P33527 1531 aa13.49□□□□□ -0.25
PKP2-201ENST00000070846 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
PKP2-201ENST00000070846 SHANK2Q9UPX8 1470 aa13.49□□□□□ -0.25
PKP2-201ENST00000070846 GRM8O00222 908 aa13.49□□□□□ -0.25
PKP2-201ENST00000070846 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
PKP2-201ENST00000070846 CHMP4BP1P59074 171 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
PKP2-201ENST00000070846 UTP14AQ9BVJ6 771 aaKnown RBP13.48□□□□□ -0.25
PKP2-201ENST00000070846 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 IL16Q14005 1332 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
PKP2-201ENST00000070846 RNMTO43148 476 aaKnown RBP13.48□□□□□ -0.25
PKP2-201ENST00000070846 SSBP05455 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
PKP2-201ENST00000070846 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
PKP2-201ENST00000070846 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
PKP2-201ENST00000070846 ZNF76P36508 570 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 IQCA1Q86XH1 822 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
PKP2-201ENST00000070846 DDX11Q96FC9 970 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 PDRG1Q9NUG6 133 aa13.48□□□□□ -0.25
PKP2-201ENST00000070846 BAG3O95817 575 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 APBA3O96018 575 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 OFD1O75665 1012 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
PKP2-201ENST00000070846 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 CCDC96Q2M329 555 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
PKP2-201ENST00000070846 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
PKP2-201ENST00000070846 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
PKP2-201ENST00000070846 ZNF213O14771 459 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 CDKL5O76039 1030 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 CASTP20810 708 aaKnown RBP13.46□□□□□ -0.25
PKP2-201ENST00000070846 TSPYL6Q8N831 410 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 JMYQ8N9B5 988 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 ARHGEF10O15013 1369 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 MYO1BO43795 1136 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 EPS15P42566 896 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 SKAP1Q86WV1 359 aa13.46□□□□□ -0.25
PKP2-201ENST00000070846 RBM26Q5T8P6 1007 aaKnown RBP13.46□□□□□ -0.26
PKP2-201ENST00000070846 ZNF790Q6PG37 636 aa13.46□□□□□ -0.26
PKP2-201ENST00000070846 CCAR2Q8N163 923 aaKnown RBP13.46□□□□□ -0.26
PKP2-201ENST00000070846 IRS4O14654 1257 aaPredicted RBP13.45□□□□□ -0.26
PKP2-201ENST00000070846 ME1P48163 572 aa13.45□□□□□ -0.26
PKP2-201ENST00000070846 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
PKP2-201ENST00000070846 CTCFLQ8NI51 663 aaPredicted RBP13.45□□□□□ -0.26
PKP2-201ENST00000070846 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
PKP2-201ENST00000070846 BAG6P46379 1132 aa13.45□□□□□ -0.26
PKP2-201ENST00000070846 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
PKP2-201ENST00000070846 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
PKP2-201ENST00000070846 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms