RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Pwp2Q8BU03 919 aaKnown RBP12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 LlphQ9D945 130 aaKnown RBP12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Gm20521D3Z5F7 333 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Cfdp1O88271 295 aaKnown RBP12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Itsn2Q9Z0R6 1659 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Nsd3Q6P2L6 1439 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Scaf11E9PZM7 1456 aaKnown RBP12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 RargP18911 458 aaKnown RBP12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 H2afxP27661 143 aaKnown RBP12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Wdr3Q8BHB4 942 aaKnown RBP12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 DpydQ8CHR6 1025 aa12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ranbp1P34022 203 aaKnown RBP12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Tshz3Q8CGV9 1081 aa12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 AnlnQ8K298 1121 aaKnown RBP12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Trpm1Q2TV84 1622 aa12.08□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Spata31d1bE9QA57 1361 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Btn2a2A4QPC6 514 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Atg3Q9CPX6 314 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Elf2Q9JHC9 593 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Stk3Q9JI10 497 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Klhl34A2AI76 644 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 L1td1Q587J6 782 aaKnown RBP12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Klra4Q60651 263 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ctr9Q62018 1173 aaKnown RBP12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ggt6Q6PDE7 497 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ube2oQ6ZPJ3 1288 aa12.07□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Kidins220E9Q9B7 1793 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Triml2E9PW10 424 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Cd22P35329 862 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Tyro3P55144 880 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ttll12Q3UDE2 639 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Uggt2E9Q4X2 1504 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Mcm2P97310 904 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 PdcQ9QW08 244 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Elmsan1E9Q2I4 1089 aaKnown RBP12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Hmx1O70218 332 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Surf1P09925 306 aa12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Zcchc17Q9ESX4 241 aaKnown RBP12.06□□□□□ -0.48
Ctc1-202ENSMUST00000116359 NinlQ6ZQ12 1394 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Prune1Q8BIW1 454 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 HnrnpuQ8VEK3 800 aaKnown RBP12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Hmgn5Q9JL35 406 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Dip2aQ8BWT5 1523 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Cfap58B2RW38 873 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Usp40Q8BWR4 1235 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Nup88Q8CEC0 753 aaKnown RBP12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Cgref1Q8R1U2 281 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Adck5Q80V03 582 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Q8BT18 775 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Abcc3B2RX12 1523 aa12.05□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Mcm6P97311 821 aa12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Lrrc8aQ80WG5 810 aa12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Zkscan3Q91VW9 553 aa12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Zeb2Q9R0G7 1215 aa12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Fmn2Q9JL04 1578 aa12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Evi5lH3BKQ3 813 aa12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ncbp3Q8BZR9 615 aaKnown RBP12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Stx6Q9JKK1 255 aa12.04□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Fsd2Q8BZ52 692 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Tmx4Q8C0L0 335 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 KinQ8K339 391 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Cwc15Q9JHS9 229 aaKnown RBP12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Zfp804bA0A0G2JGH6 1343 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Sall3Q62255 1320 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 MccE9PWI3 1003 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Actn3O88990 900 aaKnown RBP12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Spata16Q8C636 571 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ttc27Q8CD92 847 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Lonp2Q9DBN5 852 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Mad1l1Q9WTX8 717 aaKnown RBP12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Pik3r4Q8VD65 1358 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Samsn1P57725 372 aa12.03□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Kif3cO35066 796 aa12.02□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Ercc3P49135 783 aa12.02□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Cyp46a1Q9WVK8 500 aa12.02□□□□□ -0.48
Ctc1-202ENSMUST00000116359 Edc4Q3UJB9 1406 aaKnown RBP12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Cavin4A2AMM0 362 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Srpk2O54781 681 aaKnown RBP12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Mmp14P53690 582 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ddx19aQ61655 478 aaKnown RBP12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Trak2Q6P9N8 913 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Fam13aQ8BGI4 693 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 DonsonQ9QXP4 560 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Zranb2Q9R020 330 aaKnown RBP12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Pdzrn3Q69ZS0 1063 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Frat2Q8K025 231 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Gdap1l1Q8VE33 370 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Bcar3Q9QZK2 820 aa12.02□□□□□ -0.49
Ctc1-202ENSMUST00000116359 InsrP15208 1372 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Wdr33Q8K4P0 1330 aaKnown RBP12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Nos1Q9Z0J4 1429 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Fan1Q69ZT1 1020 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Slx4ipQ9D7Y9 413 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Trim55G3X8Y1 545 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Vamp4O70480 141 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Tpm4Q6IRU2 248 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Pof1bQ8K4L4 587 aa12.01□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Gm32742A0A1B0GT42 1604 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ubn2Q80WC1 1314 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Hsp90b1P08113 802 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms