RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 CTU2Q2VPK5 515 aaKnown RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 C6orf141Q5SZD1 244 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 IER5LQ5T953 404 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 PNCKQ6P2M8 343 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 R3HCC1LQ7Z5L2 792 aaKnown RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 C12orf43Q96C57 262 aaKnown RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 CERS4Q9HA82 394 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 TRPV4Q9HBA0 871 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 ZNF282Q9UDV7 671 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 CKAP5Q14008 2032 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 MYO1GB0I1T2 1018 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 SLC16A6O15403 523 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 MITFO75030 526 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 DIRAS1O95057 198 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 CPNE6O95741 557 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 NTRK1P04629 796 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 PIK3CBP42338 1070 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 ISL1P61371 349 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 MC1RQ01726 317 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 CD47Q08722 323 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 LAPTM4AQ15012 233 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 PRAMEF14Q5SWL7 426 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 ZNF691Q5VV52 312 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 BROXQ5VW32 411 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 PRAMEF13Q5VWM6 474 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 VITQ6UXI7 678 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 CYP4Z1Q86W10 505 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 AMZ2Q86W34 360 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 HEATR4Q86WZ0 1026 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 C2orf73Q8N5S3 287 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 OR4K1Q8NGD4 311 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 GOT1L1Q8NHS2 421 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 C16orf78Q8WTQ4 265 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 RAD51AP1Q96B01 352 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 GDE1Q9NZC3 331 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 SLC23A2Q9UGH3 650 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 HEATR5BQ9P2D3 2071 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 FKBP9O95302 570 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 FURINP09958 794 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 KELP23276 732 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 DCKP27707 260 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 GJA4P35212 333 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 CRYBA2P53672 197 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 HBA1P69905 142 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 RPA4Q13156 261 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 PDE7AQ13946 482 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 LAIR2Q6ISS4 152 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 LCTLQ6UWM7 567 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 NAGSQ8N159 534 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 METTL4Q8N3J2 472 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 MAL2Q969L2 176 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 TUBA1CQ9BQE3 449 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 LGR4Q9BXB1 951 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 MYNNQ9NPC7 610 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 TIMMDC1Q9NPL8 285 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 IGLON5A6NGN9 336 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ABCB7O75027 752 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 PCCBP05166 539 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ITGAMP11215 1152 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 JUNBP17275 347 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-211ENST00000641213 IGFBP5P24593 272 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 DNAJA1P31689 397 aaKnown RBP16.38■□□□□ 0.21
PHGDH-211ENST00000641213 DRD3P35462 400 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 DAPP51397 102 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ARHGDIAP52565 204 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ERVK-21P61565 698 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 C2orf80Q0P641 193 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 RUNX3Q13761 415 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 GPR107Q5VW38 600 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 EGFLAMQ63HQ2 1017 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 FAM71E1Q6IPT2 247 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 PIWIL3Q7Z3Z3 882 aaKnown RBP16.38■□□□□ 0.21
PHGDH-211ENST00000641213 VN1R5Q7Z5H4 357 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ZNF420Q8TAQ5 688 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-211ENST00000641213 SGCDQ92629 289 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 TFGQ92734 400 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-211ENST00000641213 UBE2E3Q969T4 207 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 DOK1Q99704 481 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ASPSCR1Q9BZE9 553 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ATAD3AQ9NVI7 634 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 BAG5Q9UL15 447 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 FAF1Q9UNN5 650 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-211ENST00000641213 TDRKHQ9Y2W6 561 aaKnown RBP16.38■□□□□ 0.21
PHGDH-211ENST00000641213 TSC22D4Q9Y3Q8 395 aa16.38■□□□□ 0.21
PHGDH-211ENST00000641213 ATG2BQ96BY7 2078 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 A0A1B0GVG6 124 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 KAT7O95251 611 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 KLK1P06870 262 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 FPR1P21462 350 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 PCGF2P35227 344 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 MVDP53602 400 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 TAS2R50P59544 299 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 CDK3Q00526 305 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 IL18R1Q13478 541 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 SKIV2LQ15477 1246 aaKnown RBP16.37■□□□□ 0.21
PHGDH-211ENST00000641213 FAM46CQ5VWP2 391 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 KDM4DQ6B0I6 523 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms