RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PLXNA1Q9UIW2 1896 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 A0A1B0GTL3 188 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 A0A1B0GVI7 797 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 SLC22A23A1A5C7 686 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 LRRC14BA6NHZ5 514 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 LINC01387J3KSC0 135 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 WNT9AO14904 365 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 B4GALT5O43286 388 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 RNGTTO60942 597 aaKnown RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 MPC2O95563 127 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 FABP3P05413 133 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 PSMA1P25786 263 aaKnown RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 CRYBB2P43320 205 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 SP2Q02086 613 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ALDH6A1Q02252 535 aaKnown RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 PUDPQ08623 228 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ABHD18Q0P651 414 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 RPA4Q13156 261 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 OR4D1Q15615 310 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 TTLL9Q3SXZ7 439 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 MPP7Q5T2T1 576 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 PRAMEF18Q5VWM3 479 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 CORO6Q6QEF8 472 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 RNF165Q6ZSG1 346 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 Q6ZSR9 355 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 GPR155Q7Z3F1 870 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ATAD1Q8NBU5 361 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 GPR150Q8NGU9 434 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 CLHC1Q8NHS4 586 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 UTP15Q8TED0 518 aaKnown RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 MYLPFQ96A32 169 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ASIC4Q96FT7 647 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 OR5M11Q96RB7 305 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF382Q96SR6 550 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 CPPED1Q9BRF8 314 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 FSD1LQ9BXM9 530 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 NXF3Q9H4D5 531 aaKnown RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 REEP1Q9H902 201 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 PIGVQ9NUD9 493 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 COA4Q9NYJ1 87 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 NLKQ9UBE8 527 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 GABRQQ9UN88 632 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 AP1M2Q9Y6Q5 423 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 A0A1W2PQL4 384 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 E9PAM4 449 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 PLOD3O60568 738 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 SNAPC5O75971 98 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 LALBAP00709 142 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 H2AFB1P0C5Y9 115 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 H2AFB2P0C5Z0 115 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 SLC2A2P11168 524 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 MAN2A2P49641 1150 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 MAD2L1Q13257 205 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 FGFBP1Q14512 234 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 MAPKAPK3Q16644 382 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 FAM209BQ5JX69 171 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 LRIF1Q5T3J3 769 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 CD276Q5ZPR3 534 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ADGRD2Q7Z7M1 963 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 LUZP2Q86TE4 346 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 DCBLD1Q8N8Z6 715 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 AP3S1Q92572 193 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 TMEM43Q9BTV4 400 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 DPCDQ9BVM2 203 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 PRR14Q9BWN1 585 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 MED28Q9H204 178 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ANKRA2Q9H9E1 313 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ATP13A1Q9HD20 1204 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 SLC35C2Q9NQQ7 365 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 SNTG1Q9NSN8 517 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 SIRT5Q9NXA8 310 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 THUMPD1Q9NXG2 353 aaKnown RBP11.6□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF226Q9NYT6 803 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 NCKAP1Q9Y2A7 1128 aa11.6□□□□□ -0.55
CAPN3-221ENST00000638141 NUP205Q92621 2012 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 ASB14A6NK59 587 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 MPTX1A8MV57 137 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 ADM5C9JUS6 153 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FAM72CH0Y354 149 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 SCAMP3O14828 347 aaKnown RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 PER2O15055 1255 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 CYP17A1P05093 508 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 IL6P05231 212 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 G6PDP11413 515 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 DARSP14868 501 aaKnown RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 PPP3R1P63098 170 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 DGKZQ13574 1117 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 GPR33Q49SQ1 333 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FAM72AQ5TYM5 149 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 NADSYN1Q6IA69 706 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FAM72DQ6L9T8 149 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 ERICH5Q6P6B1 374 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FAM72BQ86X60 149 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 SPATA22Q8NHS9 363 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 PABPC5Q96DU9 382 aaKnown RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FAM120BQ96EK7 910 aaKnown RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 NDUFB11Q9NX14 153 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms