RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 FBXL6Q8N531 539 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 TMCO5AQ8N6Q1 288 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 RNF148Q8N7C7 305 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ADCY4Q8NFM4 1077 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 CLHC1Q8NHS4 586 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 FBXO30Q8TB52 745 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ZCCHC10Q8TBK6 192 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 NCSTNQ92542 709 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 FKBP10Q96AY3 582 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ARRDC3Q96B67 414 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 RHBDF1Q96CC6 855 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 PPM1MQ96MI6 270 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ZNF347Q96SE7 839 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 FNDC11Q9BVV2 318 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 VN1R3Q9BXE9 311 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 EPB41L4BQ9H329 900 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 TMEM27Q9HBJ8 222 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 IFT80Q9P2H3 777 aaPredicted RBP5.33□□□□□ -1.56
CHD2-227ENST00000637572 ATXN10Q9UBB4 475 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 RNF11Q9Y3C5 154 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 AHCTF1Q8WYP5 2266 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 BLACEA4D250 179 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 FOXO6A8MYZ6 492 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 TGFBR3LH3BV60 316 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 IFNW1P05000 195 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 MTTPP55157 894 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 NRG3P56975 720 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 CREB5Q02930 508 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ACY1Q03154 408 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 CTC1Q2NKJ3 1217 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 C6orf136Q5SQH8 315 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 NAPRTQ6XQN6 538 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ZNF687Q8N1G0 1237 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ZNF707Q96C28 371 aaPredicted RBP5.33□□□□□ -1.56
CHD2-227ENST00000637572 ZSWIM3Q96MP5 696 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 NTMT1Q9BV86 223 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 REEP4Q9H6H4 257 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 STOX2Q9P2F5 926 aaPredicted RBP5.33□□□□□ -1.56
CHD2-227ENST00000637572 WNT16Q9UBV4 365 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 PCTPQ9UKL6 214 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ACTL7AQ9Y615 435 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 C1orf226A1L170 272 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 PRSS38A1L453 326 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 TTC36A6NLP5 189 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 HNRNPCL2B2RXH8 293 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 CLOCKO15516 846 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 SLC25A12O75746 678 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 SEMA3DO95025 777 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 RPS17P08708 135 aaKnown RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 OCM2P0CE71 109 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 OCMP0CE72 109 aaPredicted RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 NR2F6P10588 404 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 IL9P15248 144 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 CD27P26842 260 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 NOS3P29474 1203 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 TIA1P31483 386 aaKnown RBP eCLIP5.32□□□□□ -1.561e-6■■■□□ 17.7
CHD2-227ENST00000637572 CCR2P41597 374 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 ETV4P43268 484 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 CAPZA2P47755 286 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 SOX9P48436 509 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 UGT2B15P54855 530 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 HMGCS1Q01581 520 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 CYP4F3Q08477 520 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 ABHD18Q0P651 414 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 GRM7Q14831 915 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 C4orf17Q53FE4 359 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 FBXO48Q5FWF7 155 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 PRSS36Q5K4E3 855 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 IZUMO2Q6UXV1 221 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 SLC22A15Q8IZD6 547 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 SPEM1Q8N4L4 309 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 LINC00471Q8N535 108 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 XAGE5Q8WWM1 108 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 STON2Q8WXE9 905 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 ASB11Q8WXH4 323 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 DGAT2Q96PD7 388 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 SLC38A2Q96QD8 506 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 ZNF184Q99676 751 aaPredicted RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 TPSD1Q9BZJ3 242 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 OR1A2Q9Y585 309 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 BRCA1P38398 1863 aaKnown RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 ZNFX1Q9P2E3 1918 aaKnown RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 A0A1B0GTW7 788 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 IRGMA1A4Y4 181 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 SEC24DO94855 1032 aaPredicted RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 CST1P01037 141 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 PGRP06401 933 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 KLK1P06870 262 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 ALOX5P09917 674 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 FAM58BPP0C7Q3 252 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 F3P13726 295 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 BMP7P18075 431 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 POLR2CP19387 275 aaPredicted RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 SDHBP21912 280 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 PAICSP22234 425 aaKnown RBP5.32□□□□□ -1.56
CHD2-227ENST00000637572 GDF5P43026 501 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 ERFP50548 548 aa5.32□□□□□ -1.56
CHD2-227ENST00000637572 NCBP2P52298 156 aaKnown RBP eCLIP5.32□□□□□ -1.56
CHD2-227ENST00000637572 RPS13P62277 151 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms