RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PRSS44E7EML9 344 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 CES2O00748 559 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 GALR3O60755 368 aaPredicted RBP17.38■□□□□ 0.37
CLN6-220ENST00000637450 WISP2O76076 250 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 CD96P40200 585 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 AP1S2P56377 157 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 PMP22Q01453 160 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 MEF2AQ02078 507 aaPredicted RBP17.38■□□□□ 0.37
CLN6-220ENST00000637450 ACTN3Q08043 901 aaPredicted RBP17.38■□□□□ 0.37
CLN6-220ENST00000637450 ART3Q13508 389 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 ABRAXAS2Q15018 415 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 MEP1AQ16819 746 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 TEDDM1Q5T9Z0 273 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 PAPD4Q6PIY7 484 aaKnown RBP17.38■□□□□ 0.37
CLN6-220ENST00000637450 CRLF3Q8IUI8 442 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 ZNF740Q8NDX6 193 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 MDS2Q8NDY4 140 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 OR5T3Q8NGG3 340 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 ITLN2Q8WWU7 325 aaPredicted RBP17.38■□□□□ 0.37
CLN6-220ENST00000637450 FBXL8Q96CD0 374 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 CERS2Q96G23 380 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 ASIC3Q9UHC3 531 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 SNX12Q9UMY4 172 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 VWA7Q9Y334 891 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 TRBC2A0A5B9 178 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 ARHGAP10A1A4S6 786 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 ZNF860A6NHJ4 632 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 CCL21O00585 134 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 NDUFS4O43181 175 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 OR1F1O43749 312 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 DNAJB6O75190 326 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 CDC123O75794 336 aaPredicted RBP17.37■□□□□ 0.37
CLN6-220ENST00000637450 PRF1P14222 555 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 IVDP26440 423 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 CA7P43166 264 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 PGGT1BP53609 377 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 PDAP1Q13442 181 aaKnown RBP17.37■□□□□ 0.37
CLN6-220ENST00000637450 USP10Q14694 798 aaKnown RBP17.37■□□□□ 0.37
CLN6-220ENST00000637450 BBS9Q3SYG4 887 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 HECTD2Q5U5R9 776 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 STRA8Q7Z7C7 330 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 ATL1Q8WXF7 558 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 SLCO2A1Q92959 643 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 TSLPQ969D9 159 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 CCDC120Q96HB5 630 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 SIGLEC12Q96PQ1 595 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 LPAR4Q99677 370 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 UTP23Q9BRU9 249 aaKnown RBP17.37■□□□□ 0.37
CLN6-220ENST00000637450 RBCK1Q9BYM8 510 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 TRIM54Q9BYV2 358 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 SLC17A6Q9P2U8 582 aa17.37■□□□□ 0.37
CLN6-220ENST00000637450 SUCOQ9UBS9 1254 aaKnown RBP17.37■□□□□ 0.37
CLN6-220ENST00000637450 KLF2Q9Y5W3 355 aaPredicted RBP17.37■□□□□ 0.37
CLN6-220ENST00000637450 CPAMD8Q8IZJ3 1885 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 PABPN1LA6NDY0 278 aaKnown RBP17.36■□□□□ 0.37
CLN6-220ENST00000637450 TTI1O43156 1089 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 CHST10O43529 356 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 MAN1A2O60476 641 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 FHP07954 510 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 ENO2P09104 434 aaPredicted RBP17.36■□□□□ 0.37
CLN6-220ENST00000637450 ALOX12P18054 663 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 TNFRSF8P28908 595 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 RBPJQ06330 500 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 OR1C1Q15619 314 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 DEFB134Q4QY38 66 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 CATSPEREQ5SY80 951 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 SPINK14Q6IE38 97 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 NIPAL1Q6NVV3 410 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 MTFR2Q6P444 385 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 SRRM1Q8IYB3 904 aaKnown RBP17.36■□□□□ 0.37
CLN6-220ENST00000637450 TBC1D19Q8N5T2 526 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 GPATCH11Q8N954 259 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 NT5CQ8TCD5 201 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 TBC1D20Q96BZ9 403 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 SCMH1Q96GD3 660 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 PDLIM5Q96HC4 596 aaKnown RBP17.36■□□□□ 0.37
CLN6-220ENST00000637450 DDX47Q9H0S4 455 aaKnown RBP17.36■□□□□ 0.37
CLN6-220ENST00000637450 PPANQ9NQ55 473 aaKnown RBP17.36■□□□□ 0.37
CLN6-220ENST00000637450 ANKRD10Q9NXR5 420 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 ZFP69BQ9UJL9 534 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 CORO1CQ9ULV4 474 aaPredicted RBP17.36■□□□□ 0.37
CLN6-220ENST00000637450 SCN2AQ99250 2005 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 SCN3AQ9NY46 2000 aa17.36■□□□□ 0.37
CLN6-220ENST00000637450 APCP25054 2843 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 ELK3P41970 407 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 SCTRP47872 440 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 ST13P50502 369 aaKnown RBP17.35■□□□□ 0.37
CLN6-220ENST00000637450 OR4D2P58180 307 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 SLC26A5P58743 744 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 SKP1P63208 163 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 CSHL1Q14406 222 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 FAM45BPQ6NSW5 357 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 MRGPRGQ86SM5 289 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 ZNF808Q8N4W9 903 aaPredicted RBP17.35■□□□□ 0.37
CLN6-220ENST00000637450 SLC5A8Q8N695 610 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 FAM45AQ8TCE6 357 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 ELP5Q8TE02 316 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 SLC5A11Q8WWX8 675 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 NEIL2Q969S2 332 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 OLFM1Q99784 485 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms