RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PIK3CBP42338 1070 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 ARSFP54793 590 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 RGS1Q08116 209 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 GALNT1Q10472 559 aaPredicted RBP15.24■□□□□ 0.03
CLN6-216ENST00000636876 IFT88Q13099 833 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 FAM214AQ32MH5 1076 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 ARL13AQ5H913 290 aaPredicted RBP15.24■□□□□ 0.03
CLN6-216ENST00000636876 MANEAQ5SRI9 462 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 GARNL3Q5VVW2 1013 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 FRG2Q64ET8 278 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 TTC19Q6DKK2 380 aaPredicted RBP15.24■□□□□ 0.03
CLN6-216ENST00000636876 RHBDD2Q6NTF9 364 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 HUS1BQ8NHY5 278 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 WDR20Q8TBZ3 569 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 ZNF473Q8WTR7 871 aaKnown RBP15.24■□□□□ 0.03
CLN6-216ENST00000636876 C10orf90Q96M02 699 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 ZNF578Q96N58 590 aaPredicted RBP15.24■□□□□ 0.03
CLN6-216ENST00000636876 FRG2BQ96QU4 278 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 SHCBP1LQ9BZQ2 653 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 SPRY4Q9C004 299 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 SLC6A16Q9GZN6 736 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 TNFRSF12AQ9NP84 129 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 CUTCQ9NTM9 273 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 ADGRE2Q9UHX3 823 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 ACSL6Q9UKU0 697 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 SNX6Q9UNH7 406 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 TMEM184BQ9Y519 407 aaPredicted RBP15.24■□□□□ 0.03
CLN6-216ENST00000636876 PKD1L2Q7Z442 2459 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 SDK2Q58EX2 2172 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 TMEM114B3SHH9 223 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 MED26O95402 600 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 DLGAP3O95886 979 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 CAPN1P07384 714 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 HMOX2P30519 316 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 ARRB2P32121 409 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 PHEXP78562 749 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 HYAL2Q12891 473 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 STX3Q13277 289 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 DDX39BQ13838 428 aaKnown RBP15.23■□□□□ 0.03
CLN6-216ENST00000636876 MUM1Q2TAK8 710 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 TBC1D25Q3MII6 688 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 C10orf62Q5T681 223 aaPredicted RBP15.23■□□□□ 0.03
CLN6-216ENST00000636876 FAM219BQ5XKK7 198 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 TMEM214Q6NUQ4 689 aaKnown RBP15.23■□□□□ 0.03
CLN6-216ENST00000636876 CUZD1Q86UP6 607 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 TRIM42Q8IWZ5 723 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 SLC38A9Q8NBW4 561 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 KCT2Q8NC54 265 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 RAB3IL1Q8TBN0 382 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 METTL6Q8TCB7 284 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 CCT6BQ92526 530 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 GATA6Q92908 595 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 KCNA7Q96RP8 456 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 MS4A8Q9BY19 250 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 SLC7A5P2Q9GIP4 190 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 ELOVL6Q9H5J4 265 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 EML4Q9HC35 981 aaKnown RBP15.23■□□□□ 0.03
CLN6-216ENST00000636876 DMRT3Q9NQL9 472 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 TXLNGQ9NUQ3 528 aa15.23■□□□□ 0.03
CLN6-216ENST00000636876 DHCR7Q9UBM7 475 aaKnown RBP15.23■□□□□ 0.03
CLN6-216ENST00000636876 RALYQ9UKM9 306 aaKnown RBP15.23■□□□□ 0.03
CLN6-216ENST00000636876 APC2O95996 2303 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 FOXE1O00358 373 aaPredicted RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 MANBAO00462 879 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 DSCR3O14972 297 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 ITM2AO43736 263 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 CRCPO75575 148 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 TBX6O95947 436 aaPredicted RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 KRT6AP02538 564 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 KRT6BP04259 564 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 HNRNPH1P31943 449 aaKnown RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 RORAP35398 523 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 KRT6CP48668 564 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 NEK2P51955 445 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 ABCE1P61221 599 aaKnown RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 STXBP1P61764 594 aaKnown RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 SNRPNP63162 240 aaKnown RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 BST1Q10588 318 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 COL9A2Q14055 689 aaPredicted RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 NDUFA9Q16795 377 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 ADPRMQ3LIE5 342 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 TOR1AIP1Q5JTV8 583 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 ATG14Q6ZNE5 492 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 TTLL10Q6ZVT0 673 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 ZFAND4Q86XD8 727 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 RNF175Q8N4F7 328 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 GALNT6Q8NCL4 622 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 ZCCHC10Q8TBK6 192 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 PROKR1Q8TCW9 393 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 CLIP3Q96DZ5 547 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 CMTM7Q96FZ5 175 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 LRFN5Q96NI6 719 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 MTERF1Q99551 399 aaKnown RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 AICDAQ9GZX7 198 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 PRM3Q9NNZ6 103 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
CLN6-216ENST00000636876 DKK4Q9UBT3 224 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 PPT2Q9UMR5 302 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 MRPS2Q9Y399 296 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms