RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 VOPP1Q96AW1 172 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 TMEM159Q96B96 161 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 PPP1R14BQ96C90 147 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 OTUB1Q96FW1 271 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 EXOSC4Q9NPD3 245 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 C14orf119Q9NWQ9 140 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 QPCTLQ9NXS2 382 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 NAALAD2Q9Y3Q0 740 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 PCDHB11Q9Y5F2 797 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 SPEGQ15772 3267 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 M0R082 166 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 AQP9O43315 295 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 TPST2O60704 377 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 LEFTY1O75610 366 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SOX14O95416 240 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 C9P02748 559 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 STATHP02808 62 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SPNP16150 400 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 TGFBR2P37173 567 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 PPIGQ13427 754 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SYT6Q5T7P8 510 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 Q6ZNB5 142 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 BCDIN3DQ7Z5W3 292 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 L3MBTL4Q8NA19 623 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 OR7G3Q8NG95 312 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 OR10G2Q8NGC3 310 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 C7orf34Q96L11 122 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 PKP4Q99569 1192 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 BTBD2Q9BX70 525 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 ADPRHL2Q9NX46 363 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 NDUFAF4Q9P032 175 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 KIAA0100Q14667 2235 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SSX4O60224 188 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 C8GP07360 202 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 RAE1P78406 368 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 GRIN2CQ14957 1233 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 LYPLAL1Q5VWZ2 237 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 RNF130Q86XS8 419 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 LGI4Q8N135 537 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 WDR48Q8TAF3 677 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 ASZ1Q8WWH4 475 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 GGHQ92820 318 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 IL17FQ96PD4 163 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 HMX1Q9NP08 348 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 GPATCH2Q9NW75 528 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 HCFC2Q9Y5Z7 792 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 MYO15AQ9UKN7 3530 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 MICAL3Q7RTP6 2002 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 PRAMEF25A6NGN4 478 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 LEFTY2O00292 366 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SH3BP5O60239 455 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SOCS5O75159 536 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 XPAP23025 273 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 CD40LGP29965 261 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 TGM4P49221 684 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SRSF11Q05519 484 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 ST3GAL4Q11206 333 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 RPS26P11Q5JNZ5 115 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 PLEKHG7Q6ZR37 379 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 NPAS3Q8IXF0 933 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 RAVER1Q8IY67 606 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 OVCA2Q8WZ82 227 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 TCEAL4Q96EI5 215 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 CEP295NLQ96MC4 621 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 OR5M11Q96RB7 305 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 SLC46A2Q9BY10 475 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 ASIC5Q9NY37 505 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 STOX2Q9P2F5 926 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 TSC22D4Q9Y3Q8 395 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 CFAP20Q9Y6A4 193 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 FRMPD3Q5JV73 1810 aa13.5□□□□□ -0.25
CACNA1A-228ENST00000636610 RTCAO00442 366 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 SCAMP2O15127 329 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 SOD2P04179 222 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 CKMT1AP12532 417 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 CHI3L1P36222 383 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 HNF4AP41235 474 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 CTSKP43235 329 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 TRPC1P48995 793 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 KEAP1Q14145 624 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 PROX2Q3B8N5 592 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 ZC3H12BQ5HYM0 836 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 ZNF783Q6ZMS7 281 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 MEX3DQ86XN8 651 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 SVOPQ8N4V2 548 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 SLC35A5Q9BS91 424 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 ITPAQ9BY32 194 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 SPNS1Q9H2V7 528 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 PALMDQ9NP74 551 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 C11orf16Q9NQ32 467 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 CTPS2Q9NRF8 586 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 MS4A12Q9NXJ0 267 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 DUSP12Q9UNI6 340 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 LYVE1Q9Y5Y7 322 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 BACE2Q9Y5Z0 518 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 A0A0G2JN53 185 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms