RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZDHHC2Q9UIJ5 367 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 RAP2CQ9Y3L5 183 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 TIMM22Q9Y584 194 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 KLK4Q9Y5K2 254 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 TMEM233B4DJY2 109 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 AZIN1O14977 448 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 CTSVO60911 334 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 CIB2O75838 187 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 ENO1P06733 434 aaKnown RBP13.82□□□□□ -0.2
LINC00339-208ENST00000634934 BCL6P41182 706 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 INHBCP55103 352 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 FOXA1P55317 472 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 KCNAB1Q14722 419 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 GGTA1PQ4G0N0 100 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 SGO1Q5FBB7 561 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 CLEC6AQ6EIG7 209 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 FBXO42Q6P3S6 717 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 TMIGD1Q6UXZ0 262 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 LRRC74BQ6ZQY2 392 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 ARHGAP22Q7Z5H3 698 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 KMT5CQ86Y97 462 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 SCUBE1Q8IWY4 988 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 ZNF781Q8N8C0 355 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 KLHL6Q8WZ60 621 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 JADE3Q92613 823 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 UBE2E3Q969T4 207 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 TMEM74Q96NL1 305 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 FCRL4Q96PJ5 515 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 ZNF768Q9H5H4 540 aaKnown RBP13.82□□□□□ -0.2
LINC00339-208ENST00000634934 ELOVL6Q9H5J4 265 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 PNPOQ9NVS9 261 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 NMRK1Q9NWW6 199 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 SEMA5BQ9P283 1151 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 TRAF6Q9Y4K3 522 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 NCOR2Q9Y618 2525 aa13.82□□□□□ -0.2
LINC00339-208ENST00000634934 SNRNP200O75643 2136 aaKnown RBP13.82□□□□□ -0.2
LINC00339-208ENST00000634934 KCNE1BA0A087WTH5 132 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 TRBC2A0A5B9 178 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 B2RBV5 119 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 LCMT2O60294 686 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 MT-CO3P00414 261 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 ANKRD34CP0C6C1 535 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 KITP10721 976 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 UROSP10746 265 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 NELFEP18615 380 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 ADSLP30566 484 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 CPOXP36551 454 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 RPL14P50914 215 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 PDX1P52945 283 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 AQP5P55064 265 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 RPS15AP62244 130 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 ZFP36L1Q07352 338 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 TRA2AQ13595 282 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 DDX39BQ13838 428 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 E2F2Q14209 437 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 KPNB1Q14974 876 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 RCN1Q15293 331 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 MUM1Q2TAK8 710 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 DEFB110Q30KQ9 67 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 TCHHL1Q5QJ38 904 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 TMTC4Q5T4D3 741 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 HES3Q5TGS1 186 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 TREML1Q86YW5 311 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 CLYBLQ8N0X4 340 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 OR7G3Q8NG95 312 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 REPS1Q96D71 796 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 SLC41A2Q96JW4 573 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 ZFYVE21Q9BQ24 234 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 SLC29A3Q9BZD2 475 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 VCXQ9H320 206 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 MARCOQ9UEW3 520 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 ZNF490Q9ULM2 529 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-208ENST00000634934 SNX6Q9UNH7 406 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 BTRCQ9Y297 605 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 PCDHGA11Q9Y5H2 935 aa13.81□□□□□ -0.2
LINC00339-208ENST00000634934 H0YIV9 168 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 MANBAO00462 879 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CHEK2O96017 543 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 KRT6AP02538 564 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 STATHP02808 62 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 KRT6BP04259 564 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 SERPIND1P05546 499 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CSTF2P33240 577 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 KRT6CP48668 564 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 NEK2P51955 445 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CYP4F2P78329 520 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 FOXC1Q12948 553 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 ZC3H12BQ5HYM0 836 aaKnown RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CDCP2Q5VXM1 449 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 FRG2Q64ET8 278 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 ADNP2Q6IQ32 1131 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 RNF44Q7L0R7 432 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 MARCH9Q86YJ5 346 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 MCATQ8IVS2 390 aaKnown RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 LAS2Q8IYD9 372 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 D2HGDHQ8N465 521 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 DNAJC22Q8N4W6 341 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 AFAP1L2Q8N4X5 818 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms