RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ZBED5Q49AG3 693 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 GKN2Q86XP6 184 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 SIDT2Q8NBJ9 832 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 G6PC3Q9BUM1 346 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 EFCAB11Q9BUY7 163 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 C12orf65Q9H3J6 166 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 TOR3AQ9H497 397 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZFP57Q9NU63 452 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 CNTN6Q9UQ52 1028 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 SSX4O60224 188 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 NPPAP01160 153 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZNF84P51523 738 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 ARL13AQ5H913 290 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 RALGPS1Q5JS13 557 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZBTB46Q86UZ6 589 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 NFAT5O94916 1531 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 MATN3O15232 486 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 PTPN2P17706 415 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 CD72P21854 359 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 CDKN2BP42772 138 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 ACTC1P68032 377 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 ACTA1P68133 377 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 CAP1Q01518 475 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 TMEM220Q6QAJ8 160 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 VPS29Q9UBQ0 182 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 INSL6Q9Y581 213 aa12.81□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZNF705EA8MWA4 302 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 MUSKO15146 869 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 C2P06681 752 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLC6A6P31641 620 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CD83Q01151 205 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 RPA4Q13156 261 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 PRAMEF14Q5SWL7 426 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 PRAMEF13Q5VWM6 474 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 LPCAT4Q643R3 524 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 IL36AQ9UHA7 158 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 ANKRD63C9JTQ0 380 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 TNFP01375 233 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 SOX9P48436 509 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 KCTD9Q7L273 389 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 PROKR1Q8TCW9 393 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 HMGB4Q8WW32 186 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 LRTOMTQ8WZ04 291 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 NMUR1Q9HB89 426 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 DOCK9Q9BZ29 2069 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 NPIPA2E9PIF3 369 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 NPIPA3F8WFD2 350 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 TPRG1LQ5T0D9 272 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 KCT2Q8NC54 265 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CCSER2Q9H7U1 834 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CD93Q9NPY3 652 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 COPZ2Q9P299 210 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 PIP5K1BO14986 540 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CFIP05156 583 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 DNAJB1P25685 340 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CCND3P30281 292 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 LRRC32Q14392 662 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 GPR33Q49SQ1 333 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 NCEH1Q6PIU2 408 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 OTOP3Q7RTS5 596 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 PLEKHA3Q9HB20 300 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 TMLHEQ9NVH6 421 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 TP53I11O14683 189 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLC7A4O43246 635 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 MT-ND2P03891 347 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 RGS6P49758 472 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 DUOXA1Q1HG43 343 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 C2orf73Q8N5S3 287 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 TMEM80Q96HE8 168 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 ITPAQ9BY32 194 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 UTS2RQ9UKP6 389 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CDC7O00311 574 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 DLGAP1O14490 977 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLC26A5P58743 744 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 GAD2Q05329 585 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 GPRC5BQ9NZH0 403 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 RAC2P15153 192 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 EEFSECP57772 596 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 RPS14P62263 151 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 GALK2Q01415 458 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 OTOP2Q7RTS6 562 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 CMTM7Q96FZ5 175 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 LIN37Q96GY3 246 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 FAXDC2Q96IV6 333 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 TMEM209Q96SK2 561 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 SRRDQ9UH36 339 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 HES2Q9Y543 173 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZNF536O15090 1300 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 NOBOXO60393 691 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 RPP14O95059 124 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 ADH1BP00325 375 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 NPTX1Q15818 432 aa12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 HOXB13Q92826 284 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 VRK1Q99986 396 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 NIFKQ9BYG3 293 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-208ENST00000629380 LAMB1P07942 1786 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms