RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ZBTB17Q13105 803 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 OLIG2Q13516 323 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 KPNB1Q14974 876 aaKnown RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 PLCL1Q15111 1095 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 NKPD1Q17RQ9 610 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 GRTP1Q5TC63 336 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CASC4Q6P4E1 433 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SLC9B2Q86UD5 537 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 PLXDC1Q8IUK5 500 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 OR52K1Q8NGK4 314 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CPT1CQ8TCG5 803 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 WDR60Q8WVS4 1066 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 RSC1A1Q92681 617 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 FOXRED1Q96CU9 486 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 EBF4Q9BQW3 602 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 EFHD1Q9BUP0 239 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 C1orf21Q9H246 121 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 LRRC40Q9H9A6 602 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SNX15Q9NRS6 342 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 RBM22Q9NW64 420 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 PIH1D1Q9NWS0 290 aaKnown RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 COPG2Q9UBF2 871 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 TLK1Q9UKI8 766 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SCN8AQ9UQD0 1980 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 TACC2O95359 2948 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CXorf51AA0A1B0GTR3 108 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 B4E171 279 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 F8W8V4 182 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 KCNK1O00180 336 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 GRID2O43424 1007 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 LYPLA1O75608 230 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 KRT36O76013 467 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 GSTM1P09488 218 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 ERVK-10P10266 1014 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 ACADSP16219 412 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 ATP6V1C1P21283 382 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SDHAP31040 664 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CPOXP36551 454 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 GARSP41250 739 aaKnown RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 TSPAN7P41732 249 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SLC1A6P48664 564 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CSNK1DP48730 415 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SERPINB8P50452 374 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CLNS1AP54105 237 aaKnown RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 ABHD18Q0P651 414 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 BLMHQ13867 455 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 GALNT3Q14435 633 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 RFTN1Q14699 578 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SFRP5Q5T4F7 317 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 FHL5Q5TD97 284 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CACHD1Q5VU97 1274 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 TRAPPC5Q8IUR0 188 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 RBM15BQ8NDT2 890 aaKnown RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 NAT14Q8WUY8 206 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 NRG4Q8WWG1 115 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 TSGA13Q96PP4 275 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 PLEKHG4BQ96PX9 1271 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 FAM83DQ9H4H8 585 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 AKTIPQ9H8T0 292 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 AKIRIN1Q9H9L7 192 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SLAMF7Q9NQ25 335 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 TMEM216Q9P0N5 145 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 KLHL8Q9P2G9 620 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 MARCOQ9UEW3 520 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 PSMD13Q9UNM6 376 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SRPK3Q9UPE1 567 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 CFAP20Q9Y6A4 193 aaKnown RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 COL27A1Q8IZC6 1860 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 H7BY64 318 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 HTRA2O43464 458 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MAFKO60675 156 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SEMA7AO75326 666 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PSMG1O95456 288 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SOD1P00441 154 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ENO1P06733 434 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 HOXC4P09017 264 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 F3P13726 295 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 FPR2P25090 351 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PBLDP30039 288 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SERPINB6P35237 376 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 STAT5AP42229 794 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 FASLGP48023 281 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CSE1LP55060 971 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MC2RQ01718 297 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 BTKQ06187 659 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MRPL49Q13405 166 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 RCN1Q15293 331 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 TAF11Q15544 211 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CCDC153Q494R4 210 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 NADK2Q4G0N4 442 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 DNAL1Q4LDG9 190 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ANKRD20A4Q4UJ75 823 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 IYDQ6PHW0 289 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 FRMD7Q6ZUT3 714 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PID1Q7Z2X4 250 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ARHGAP22Q7Z5H3 698 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 NET1Q7Z628 596 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 C17orf82Q86X59 251 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 C10orf107Q8IVU9 208 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 BMPERQ8N8U9 685 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms