RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ZZZ3Q8IYH5 903 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 FAM86B1Q8N7N1 296 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 LINC01555Q8NAE3 123 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 ABHD8Q96I13 439 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 TPT1P8Q9HAU6 139 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 NTN4Q9HB63 628 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 FZD3Q9NPG1 666 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 AASDHPPTQ9NRN7 309 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 CUEDC1Q9NWM3 386 aaPredicted RBP21.15■□□□□ 0.98
PNKP-220ENST00000627232 MOSPD1Q9UJG1 213 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 ERVK-11Q9UQG0 969 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 UPK1AO00322 258 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 PRKD3O94806 890 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 KCNK5O95279 499 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 SERPINA1P01009 418 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 KLK1P06870 262 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 ABCB1P08183 1280 aaPredicted RBP21.14■□□□□ 0.98
PNKP-220ENST00000627232 GLULP15104 373 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 POU3F3P20264 500 aaPredicted RBP21.14■□□□□ 0.98
PNKP-220ENST00000627232 C2orf80Q0P641 193 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 CLCA4Q14CN2 919 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 VMACQ2NL98 169 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 ZNF385BQ569K4 471 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 DEPDC1Q5TB30 811 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 KHDRBS2Q5VWX1 349 aaKnown RBP21.14■□□□□ 0.98
PNKP-220ENST00000627232 ZCCHC8Q6NZY4 707 aaKnown RBP21.14■□□□□ 0.98
PNKP-220ENST00000627232 PPCDCQ96CD2 204 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 OR2M4Q96R27 311 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 FAM192AQ9GZU8 254 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 IMP3Q9NV31 184 aaKnown RBP21.14■□□□□ 0.98
PNKP-220ENST00000627232 PADI4Q9UM07 663 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 SAMD4AQ9UPU9 718 aaKnown RBP21.14■□□□□ 0.98
PNKP-220ENST00000627232 PLEKHM1Q9Y4G2 1056 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 HEBP2Q9Y5Z4 205 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 AP1M2Q9Y6Q5 423 aa21.14■□□□□ 0.98
PNKP-220ENST00000627232 PRSS38A1L453 326 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 C2CD4DB7Z1M9 353 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 SAP18O00422 153 aaKnown RBP21.14■□□□□ 0.97
PNKP-220ENST00000627232 EI24O14681 340 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 KDM1AO60341 852 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 MT-ND1P03886 318 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 ZNF23P17027 643 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 RPS9P46781 194 aaKnown RBP21.14■□□□□ 0.97
PNKP-220ENST00000627232 NKG7Q16617 165 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 PAGE2Q7Z2X7 111 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 SLC44A3Q8N4M1 653 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 ZFP90Q8TF47 636 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 PYURFQ96I23 114 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 MYCBPQ99417 103 aaPredicted RBP21.14■□□□□ 0.97
PNKP-220ENST00000627232 NRTNQ99748 197 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 FGF22Q9HCT0 170 aa21.14■□□□□ 0.97
PNKP-220ENST00000627232 CEP290O15078 2479 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 GPR37L1O60883 481 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 SMIM18P0DKX4 95 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 PSMB5P28074 263 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 GSTM5P46439 218 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 TAS2R50P59544 299 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 PRDX1Q06830 199 aaKnown RBP21.13■□□□□ 0.97
PNKP-220ENST00000627232 MERTKQ12866 999 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 VEZF1Q14119 521 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 GK3PQ14409 553 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 KRT33BQ14525 404 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 NFATC4Q14934 902 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 FAM124AQ86V42 546 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 PTOV1Q86YD1 416 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 SYNPOQ8N3V7 929 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 ANKRD53Q8N9V6 530 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 OR4A15Q8NGL6 344 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 TMBIM1Q969X1 311 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 MSANTD3Q96H12 275 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 QRFPRQ96P65 431 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 TRAPPC9Q96Q05 1148 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 ADI1Q9BV57 179 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 CHST8Q9H2A9 424 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 KCNK12Q9HB15 430 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 CD320Q9NPF0 282 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 PNPLA3Q9NST1 481 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 SMPD3Q9NY59 655 aaPredicted RBP21.13■□□□□ 0.97
PNKP-220ENST00000627232 PCDHGB4Q9UN71 923 aa21.13■□□□□ 0.97
PNKP-220ENST00000627232 PDZK1P1A8MUH7 402 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 H7BY64 318 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 LATO43561 262 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 TBX19O60806 448 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 APBB3O95704 486 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 TBX6O95947 436 aaPredicted RBP21.12■□□□□ 0.97
PNKP-220ENST00000627232 TPP2P29144 1249 aaPredicted RBP21.12■□□□□ 0.97
PNKP-220ENST00000627232 CSNK1G2P78368 415 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 MYBPC3Q14896 1274 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 RPE65Q16518 533 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 KIAA1324Q6UXG2 1013 aaKnown RBP21.12■□□□□ 0.97
PNKP-220ENST00000627232 SVOPLQ8N434 492 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 RPLP0P6Q8NHW5 317 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 PRAP1Q96NZ9 151 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 MYOCQ99972 504 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 RPS6KA6Q9UK32 745 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.12■□□□□ 0.97
PNKP-220ENST00000627232 PCDHGB5Q9Y5G0 923 aa21.12■□□□□ 0.97
PNKP-220ENST00000627232 POM121BA6NF01 834 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 CCDC85CA6NKD9 419 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 PLPP1O14494 284 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms